Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g01254 | ATGTCCTGCACTGCATATACTACGATATGTCAGTTGGAAAGTTATTTCGCTGCTCTAAATGCCATGTATAGTAGTTTAAACTCGCCTCCAATTCTAACACTATGGAGTTCAAGTGGTGGCGATCCATGTGGACAAATTTGGAAAGGCATTACTTGTGCAGGCTCAAGGGTCACAGAAATTTCATTGACTGGTTTAGGACTTTCTGGATCACTGGGATACCAGCTCTCAAGTTTGGCATCTCTAATTAATCTAGATGTGAGTTCCAACAATCTTGGACCTGACATACCTTATCAACTCCCTCAAAACTTGCAAAAACTAAATCTTGGATGGAATAACTTCAGTGGAAGCATCCCGTATTCTCTTTCTCAAATGAGTTTGCTTATTTCCTTGAACATCAGCCACAATCAGCTTGGGAATCAAGTGAATGATATGTTTTGGAAGCTTTCTTCCTTGGCCATGTTGGATGTCTCTTTCAATTCTCTGTCAGGTGCCCTTCCCCAGAGTTTTAGCAACCTTACCAGTATGAATGCAATGTTTCTGCAAAACAACCAATTCAGTGGCACTATTGATGTTCTTGCAAATCTTCCACTACAAAATTTGAATGTCGAGAACAATCATTTTACAGGATGGGTTCCTGAACGATTGAAGAACATAAATATTCAGGAGGGTGGCAATTCTTGGAGCTTTGGGCTTGCACCCCCACCTCCACCTGGTACACCTCCAGCCAACCAAGATTACAGATATCACAAGCCGGGAAATATTTACAGCCCACTGAGTAGTCATGCTGCTGGTGGAGATAGCAGATCAGGTATCAGTGGTGGTGCCATTGCGGGAATTGTTATCTCTGTGCTAGTGGTGGGAGCAGTAATAGCATACATGCTTGTAAAGAGAAGATCCAAAAGGTCTTCCTCAGACATGGACAAGCAAAAGCTTGGGAACTTGCCTATCGTATCTCCTGCTTCAAATGGAGTGCAAGAACAAATTCTCTTGAAAGATCCATTGGCAGAGATAAAGCTTGTTCATACTTCATCCTCATTTGATGCAAAATCATTGGATTCTCCTGCTTCAATCAATCTTAAGCCCCCACCTACTGATTCTCATAAATCATTCGATGATAATGATACATCAAAGATACCTGTAGTGAAGAAGACCGTTGCCACCCCTCCGATAAGTGTGAAGTCATATTCAATAGCAGATCTTCAAATGGCTACGGGCAGTTTCGATGTAGAAAACCTTCTCGGTGAGGGATCGCTTGGACGTGTTTATCAGGCTCAGTTCGATGATGGGAAGGTTCTTGCCGTGAAGAAAATAGATTCAGCCGCCTTCCCTAGAGGATTGTTGGAGGATTTCACAGAGATAGTTGCTAATGTATCTCAGTTGCATCATCCTAATGTAACCGAGCTAATGGGTTATTGCTCAGAGCATGGCCTGCATTTGCTAGTATATGAGTTCCATAAGAATGGCTCGCTACATGACTTTTTGCACATATCAGATGAATATAGCAAGCCACTGACCTGGAACTCCCGTGTCAAGATTGCTTTGGGGACGGCTCGTGCATTAGAGTACCTGCATGAAGTTTGTGCACCGTCAGTTGTTCACAGAAATATTAAGTCAGCCAATATCTTACTAGATGCTGAAATTAATCCTCATCTCTCTGATTGTGGCCTGGCTAGCTTTATAACCAATCTTGATCAGGTGAGCTTTATAACCAATCTGCATGCATTAGATCACCAGGTAGGATCTGGGTACAATGCCCCTGAGGTTACCATGTCGGGTCAATACACATTGAAGAGCGATGTATACAGCTTTGGAGTGGTTATGTTGGAACTTCTAAGCGGGCGGAAGCCATTTGATAGTTCAAGGCCAAGAGATGAGCAATCCTTGGTTCGATGGGCTACACCTCAGCTCCATGACATTGATGCCTTGACGAAAATGGTTGATCCTGCTCTTAAAGGGCTCTACCCAGTCAAGTCTCTCTCAAGATTTGCAGACGTTGTGGCTCTTTGCGTCCAGCCGGAGCCTGAATTTAGACCACCTATGTCAGAGGTGGTGGAATCCTTGGTTCGGCTTGTGCAGAGGTCCAACATGAGCAGAAGGACGTTTGGAAGTGATCATGGATCATCTTTTAGAACTGATGATCCTGATGCACGTGAGACATCTTAA | 2163 | 43.6 | MSCTAYTTICQLESYFAALNAMYSSLNSPPILTLWSSSGGDPCGQIWKGITCAGSRVTEISLTGLGLSGSLGYQLSSLASLINLDVSSNNLGPDIPYQLPQNLQKLNLGWNNFSGSIPYSLSQMSLLISLNISHNQLGNQVNDMFWKLSSLAMLDVSFNSLSGALPQSFSNLTSMNAMFLQNNQFSGTIDVLANLPLQNLNVENNHFTGWVPERLKNINIQEGGNSWSFGLAPPPPPGTPPANQDYRYHKPGNIYSPLSSHAAGGDSRSGISGGAIAGIVISVLVVGAVIAYMLVKRRSKRSSSDMDKQKLGNLPIVSPASNGVQEQILLKDPLAEIKLVHTSSSFDAKSLDSPASINLKPPPTDSHKSFDDNDTSKIPVVKKTVATPPISVKSYSIADLQMATGSFDVENLLGEGSLGRVYQAQFDDGKVLAVKKIDSAAFPRGLLEDFTEIVANVSQLHHPNVTELMGYCSEHGLHLLVYEFHKNGSLHDFLHISDEYSKPLTWNSRVKIALGTARALEYLHEVCAPSVVHRNIKSANILLDAEINPHLSDCGLASFITNLDQVSFITNLHALDHQVGSGYNAPEVTMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRDEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVESLVRLVQRSNMSRRTFGSDHGSSFRTDDPDARETS | 720 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 10564460 | 10570471 | - | CmoCh14G012540.1 | Cmo14g01254 | 396520 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g01254 | 720 | SUPERFAMILY | L domain-like | 14 | 217 | - | - | |
Cmo14g01254 | 720 | MobiDBLite | consensus disorder prediction | 226 | 250 | - | - | |
Cmo14g01254 | 720 | ProSiteProfiles | Protein kinase domain profile. | 407 | 690 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo14g01254 | 720 | SUPERFAMILY | Protein kinase-like (PK-like) | 388 | 687 | IPR011009 | - | |
Cmo14g01254 | 720 | MobiDBLite | consensus disorder prediction | 705 | 720 | - | - | |
Cmo14g01254 | 720 | Gene3D | Phosphorylase Kinase; domain 1 | 369 | 484 | - | - | |
Cmo14g01254 | 720 | MobiDBLite | consensus disorder prediction | 698 | 720 | - | - | |
Cmo14g01254 | 720 | Pfam | Leucine rich repeat N-terminal domain | 17 | 52 | IPR013210 | - | |
Cmo14g01254 | 720 | Pfam | Leucine rich repeat | 102 | 161 | IPR001611 | GO:0005515 | |
Cmo14g01254 | 720 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 | 16 | 716 | - | - | |
Cmo14g01254 | 720 | CDD | STKc_IRAK | 413 | 690 | - | - | |
Cmo14g01254 | 720 | Gene3D | Ribonuclease Inhibitor | 10 | 230 | IPR032675 | - | |
Cmo14g01254 | 720 | PANTHER | OS01G0253100 PROTEIN | 16 | 716 | IPR045271 | GO:0004714|GO:0006468 | |
Cmo14g01254 | 720 | Pfam | Protein tyrosine and serine/threonine kinase | 409 | 687 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo14g01254 | 720 | Gene3D | Transferase(Phosphotransferase) domain 1 | 486 | 710 | - | - | |
Cmo14g01254 | 720 | MobiDBLite | consensus disorder prediction | 351 | 374 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00498 | Cmo-Chr3:5278539 | Cmo14g01254 | Cmo-Chr14:10564460 | 8.76E-172 | dispersed | |
Cmo14g01254 | Cmo-Chr14:10564460 | Cmo18g00544 | Cmo-Chr18:4215426 | 0 | dispersed | |
Cmo04g01041 | Cmo-Chr4:5192239 | Cmo14g01254 | Cmo-Chr14:10564460 | 0 | transposed | |
Cmo15g01506 | Cmo-Chr15:10197461 | Cmo14g01254 | Cmo-Chr14:10564460 | 0 | transposed | |
Cmo01g00024 | Cmo-Chr1:83641 | Cmo14g01254 | Cmo-Chr14:10564460 | 0 | wgd | |
Cmo14g01254 | Cmo-Chr14:10564460 | Cmo17g00626 | Cmo-Chr17:6571058 | 0 | wgd | |
Cmo14g01254 | Cmo-Chr14:10564460 | Cmo08g00808 | Cmo-Chr8:5112712 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74855 | PF07714 | PK_Tyr_Ser-Thr | 2.10E-40 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g01254 | - | - | csv:101208239 | 1189.87 |