Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01254 ATGTCCTGCACTGCATATACTACGATATGTCAGTTGGAAAGTTATTTCGCTGCTCTAAATGCCATGTATAGTAGTTTAAACTCGCCTCCAATTCTAACACTATGGAGTTCAAGTGGTGGCGATCCATGTGGACAAATTTGGAAAGGCATTACTTGTGCAGGCTCAAGGGTCACAGAAATTTCATTGACTGGTTTAGGACTTTCTGGATCACTGGGATACCAGCTCTCAAGTTTGGCATCTCTAATTAATCTAGATGTGAGTTCCAACAATCTTGGACCTGACATACCTTATCAACTCCCTCAAAACTTGCAAAAACTAAATCTTGGATGGAATAACTTCAGTGGAAGCATCCCGTATTCTCTTTCTCAAATGAGTTTGCTTATTTCCTTGAACATCAGCCACAATCAGCTTGGGAATCAAGTGAATGATATGTTTTGGAAGCTTTCTTCCTTGGCCATGTTGGATGTCTCTTTCAATTCTCTGTCAGGTGCCCTTCCCCAGAGTTTTAGCAACCTTACCAGTATGAATGCAATGTTTCTGCAAAACAACCAATTCAGTGGCACTATTGATGTTCTTGCAAATCTTCCACTACAAAATTTGAATGTCGAGAACAATCATTTTACAGGATGGGTTCCTGAACGATTGAAGAACATAAATATTCAGGAGGGTGGCAATTCTTGGAGCTTTGGGCTTGCACCCCCACCTCCACCTGGTACACCTCCAGCCAACCAAGATTACAGATATCACAAGCCGGGAAATATTTACAGCCCACTGAGTAGTCATGCTGCTGGTGGAGATAGCAGATCAGGTATCAGTGGTGGTGCCATTGCGGGAATTGTTATCTCTGTGCTAGTGGTGGGAGCAGTAATAGCATACATGCTTGTAAAGAGAAGATCCAAAAGGTCTTCCTCAGACATGGACAAGCAAAAGCTTGGGAACTTGCCTATCGTATCTCCTGCTTCAAATGGAGTGCAAGAACAAATTCTCTTGAAAGATCCATTGGCAGAGATAAAGCTTGTTCATACTTCATCCTCATTTGATGCAAAATCATTGGATTCTCCTGCTTCAATCAATCTTAAGCCCCCACCTACTGATTCTCATAAATCATTCGATGATAATGATACATCAAAGATACCTGTAGTGAAGAAGACCGTTGCCACCCCTCCGATAAGTGTGAAGTCATATTCAATAGCAGATCTTCAAATGGCTACGGGCAGTTTCGATGTAGAAAACCTTCTCGGTGAGGGATCGCTTGGACGTGTTTATCAGGCTCAGTTCGATGATGGGAAGGTTCTTGCCGTGAAGAAAATAGATTCAGCCGCCTTCCCTAGAGGATTGTTGGAGGATTTCACAGAGATAGTTGCTAATGTATCTCAGTTGCATCATCCTAATGTAACCGAGCTAATGGGTTATTGCTCAGAGCATGGCCTGCATTTGCTAGTATATGAGTTCCATAAGAATGGCTCGCTACATGACTTTTTGCACATATCAGATGAATATAGCAAGCCACTGACCTGGAACTCCCGTGTCAAGATTGCTTTGGGGACGGCTCGTGCATTAGAGTACCTGCATGAAGTTTGTGCACCGTCAGTTGTTCACAGAAATATTAAGTCAGCCAATATCTTACTAGATGCTGAAATTAATCCTCATCTCTCTGATTGTGGCCTGGCTAGCTTTATAACCAATCTTGATCAGGTGAGCTTTATAACCAATCTGCATGCATTAGATCACCAGGTAGGATCTGGGTACAATGCCCCTGAGGTTACCATGTCGGGTCAATACACATTGAAGAGCGATGTATACAGCTTTGGAGTGGTTATGTTGGAACTTCTAAGCGGGCGGAAGCCATTTGATAGTTCAAGGCCAAGAGATGAGCAATCCTTGGTTCGATGGGCTACACCTCAGCTCCATGACATTGATGCCTTGACGAAAATGGTTGATCCTGCTCTTAAAGGGCTCTACCCAGTCAAGTCTCTCTCAAGATTTGCAGACGTTGTGGCTCTTTGCGTCCAGCCGGAGCCTGAATTTAGACCACCTATGTCAGAGGTGGTGGAATCCTTGGTTCGGCTTGTGCAGAGGTCCAACATGAGCAGAAGGACGTTTGGAAGTGATCATGGATCATCTTTTAGAACTGATGATCCTGATGCACGTGAGACATCTTAA 2163 43.6 MSCTAYTTICQLESYFAALNAMYSSLNSPPILTLWSSSGGDPCGQIWKGITCAGSRVTEISLTGLGLSGSLGYQLSSLASLINLDVSSNNLGPDIPYQLPQNLQKLNLGWNNFSGSIPYSLSQMSLLISLNISHNQLGNQVNDMFWKLSSLAMLDVSFNSLSGALPQSFSNLTSMNAMFLQNNQFSGTIDVLANLPLQNLNVENNHFTGWVPERLKNINIQEGGNSWSFGLAPPPPPGTPPANQDYRYHKPGNIYSPLSSHAAGGDSRSGISGGAIAGIVISVLVVGAVIAYMLVKRRSKRSSSDMDKQKLGNLPIVSPASNGVQEQILLKDPLAEIKLVHTSSSFDAKSLDSPASINLKPPPTDSHKSFDDNDTSKIPVVKKTVATPPISVKSYSIADLQMATGSFDVENLLGEGSLGRVYQAQFDDGKVLAVKKIDSAAFPRGLLEDFTEIVANVSQLHHPNVTELMGYCSEHGLHLLVYEFHKNGSLHDFLHISDEYSKPLTWNSRVKIALGTARALEYLHEVCAPSVVHRNIKSANILLDAEINPHLSDCGLASFITNLDQVSFITNLHALDHQVGSGYNAPEVTMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRDEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVESLVRLVQRSNMSRRTFGSDHGSSFRTDDPDARETS 720
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10564460 10570471 - CmoCh14G012540.1 Cmo14g01254 396520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01254 720 SUPERFAMILY L domain-like 14 217 - -
Cmo14g01254 720 MobiDBLite consensus disorder prediction 226 250 - -
Cmo14g01254 720 ProSiteProfiles Protein kinase domain profile. 407 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01254 720 SUPERFAMILY Protein kinase-like (PK-like) 388 687 IPR011009 -
Cmo14g01254 720 MobiDBLite consensus disorder prediction 705 720 - -
Cmo14g01254 720 Gene3D Phosphorylase Kinase; domain 1 369 484 - -
Cmo14g01254 720 MobiDBLite consensus disorder prediction 698 720 - -
Cmo14g01254 720 Pfam Leucine rich repeat N-terminal domain 17 52 IPR013210 -
Cmo14g01254 720 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Cmo14g01254 720 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 16 716 - -
Cmo14g01254 720 CDD STKc_IRAK 413 690 - -
Cmo14g01254 720 Gene3D Ribonuclease Inhibitor 10 230 IPR032675 -
Cmo14g01254 720 PANTHER OS01G0253100 PROTEIN 16 716 IPR045271 GO:0004714|GO:0006468
Cmo14g01254 720 Pfam Protein tyrosine and serine/threonine kinase 409 687 IPR001245 GO:0004672|GO:0006468
Cmo14g01254 720 Gene3D Transferase(Phosphotransferase) domain 1 486 710 - -
Cmo14g01254 720 MobiDBLite consensus disorder prediction 351 374 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00498 Cmo-Chr3:5278539 Cmo14g01254 Cmo-Chr14:10564460 8.76E-172 dispersed
Cmo14g01254 Cmo-Chr14:10564460 Cmo18g00544 Cmo-Chr18:4215426 0 dispersed
Cmo04g01041 Cmo-Chr4:5192239 Cmo14g01254 Cmo-Chr14:10564460 0 transposed
Cmo15g01506 Cmo-Chr15:10197461 Cmo14g01254 Cmo-Chr14:10564460 0 transposed
Cmo01g00024 Cmo-Chr1:83641 Cmo14g01254 Cmo-Chr14:10564460 0 wgd
Cmo14g01254 Cmo-Chr14:10564460 Cmo17g00626 Cmo-Chr17:6571058 0 wgd
Cmo14g01254 Cmo-Chr14:10564460 Cmo08g00808 Cmo-Chr8:5112712 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74855 PF07714 PK_Tyr_Ser-Thr 2.10E-40 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01254 - - csv:101208239 1189.87