Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g01265 | ATGAACTTTGCAGAAATACCCATAAAAAAACTAGCACCTCCCAAGAACAACGTACCCTCCACCTCTCTGTCTTTCAAGCTTTCAAGAACAATGAATTCAAGTCCAAAGACCTGCACCACCTCTCCTTTCACACCAACTCAATGGCAAGAACTAGAACACCAAGCTTTGATCTTCAAATACATGGTTTCAGGAGTACCAATCCCTCCTGATCTAATCTTCTCTGTGAAAAGAAGCTTGGATTCCTCCCTTTCTGCAAGACTTTTCCCTCACCAACCCATTGGGTGGGGGTGTTTTGAGATGGGTTTTGGCAGAAAAACAGACCCAGAACCAGGAAGGTGCAGAAGAACAGATGGCAAAAAATGGAGATGCTCAAAAGAAGCTTTTCCAGACTCCAAATACTGCGAGAAACACATGCATAGAGGCAGAAATCGTTCAAGAAAGCCTGTGGAAATCTCTTCTTCCTCTTCTTCTTCTTCTTCTTCATCTTCAATGACCTGTGAAACTCAATCATATCACCAAGCTCCTCCTCCTGCTGCTGCTGCTTATCATGAATCCTCCATTCATCCATTTATGTATACTCAATCTTCCTCCTCCAGACCTCCCTGCTCTGATTTCCCTTCAAATAATACAAACCCTCAACTCTTTTTGTACTCAGGGACTCATTCTCAAGCTGATAAAGATTACAGGGATATTAATGGTTCAAGAGAGGGCGTTGGCGTGCAGGCTTTCTTTCCCTCGGTTGCTGAGGTTTATAATAATCAGCAGCCAATAGCGATGGATTCTTACAAAGGATGCTCCCAATTTGTTACTCAAAGCCACCAAATTTACAATTCTAAACAGGCAAGGCAAGAACAAGAGCAACACTGCTTTGTTTTGGGCACAGATTTCAATAAATCGTCAAAATCAGCTAAAGCAGAGGAAGAAGAACAAGAACAAGAACAAGATGGTGAAACCCAGAAGCCGCTACTCCATTTCTTTGAGGATTGCCCACCAAAAAACTCGGATTCCTGGCTTGATTTAGCCTCAAATTCAAGTATACAAAATGGAAATTTTATTGGGTTATGA | 1065 | 42.07 | MNFAEIPIKKLAPPKNNVPSTSLSFKLSRTMNSSPKTCTTSPFTPTQWQELEHQALIFKYMVSGVPIPPDLIFSVKRSLDSSLSARLFPHQPIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAFPDSKYCEKHMHRGRNRSRKPVEISSSSSSSSSSSSMTCETQSYHQAPPPAAAAYHESSIHPFMYTQSSSSRPPCSDFPSNNTNPQLFLYSGTHSQADKDYRDINGSREGVGVQAFFPSVAEVYNNQQPIAMDSYKGCSQFVTQSHQIYNSKQARQEQEQHCFVLGTDFNKSSKSAKAEEEEQEQEQDGETQKPLLHFFEDCPPKNSDSWLDLASNSSIQNGNFIGL | 354 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 10619218 | 10620624 | + | CmoCh14G012650.1 | Cmo14g01265 | 396531 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g01265 | 354 | PANTHER | - | 35 | 168 | IPR031137 | GO:0005634|GO:0006351|GO:0032502 | |
Cmo14g01265 | 354 | PANTHER | - | 154 | 348 | IPR031137 | GO:0005634|GO:0006351|GO:0032502 | |
Cmo14g01265 | 354 | ProSiteProfiles | WRC domain profile. | 107 | 151 | IPR014977 | - | |
Cmo14g01265 | 354 | PANTHER | GROWTH-REGULATING FACTOR 5 | 35 | 168 | - | - | |
Cmo14g01265 | 354 | PANTHER | GROWTH-REGULATING FACTOR 5 | 154 | 348 | - | - | |
Cmo14g01265 | 354 | MobiDBLite | consensus disorder prediction | 300 | 325 | - | - | |
Cmo14g01265 | 354 | Pfam | QLQ | 42 | 75 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Cmo14g01265 | 354 | MobiDBLite | consensus disorder prediction | 134 | 180 | - | - | |
Cmo14g01265 | 354 | ProSiteProfiles | QLQ domain profile. | 42 | 77 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Cmo14g01265 | 354 | SMART | QLQ_2 | 41 | 77 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Cmo14g01265 | 354 | Pfam | WRC | 108 | 150 | IPR014977 | - | |
Cmo14g01265 | 354 | MobiDBLite | consensus disorder prediction | 148 | 172 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo01g00038 | Cmo14g01265 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo05g00128 | Cmo-Chr5:555941 | Cmo14g01265 | Cmo-Chr14:10619218 | 1.38E-44 | dispersed | |
Cmo07g00639 | Cmo-Chr7:2889815 | Cmo14g01265 | Cmo-Chr14:10619218 | 3.99E-39 | dispersed | |
Cmo10g00789 | Cmo-Chr10:3672292 | Cmo14g01265 | Cmo-Chr14:10619218 | 1.39E-63 | dispersed | |
Cmo11g00738 | Cmo-Chr11:3593611 | Cmo14g01265 | Cmo-Chr14:10619218 | 6.41E-66 | dispersed | |
Cmo12g00548 | Cmo-Chr12:3374799 | Cmo14g01265 | Cmo-Chr14:10619218 | 1.90E-42 | dispersed | |
Cmo14g01265 | Cmo-Chr14:10619218 | Cmo20g00955 | Cmo-Chr20:5195567 | 4.86E-59 | dispersed | |
Cmo01g00038 | Cmo-Chr1:125736 | Cmo14g01265 | Cmo-Chr14:10619218 | 4.26E-175 | wgd | |
Cmo14g01265 | Cmo-Chr14:10619218 | Cmo05g01417 | Cmo-Chr5:10884190 | 2.33E-71 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
11015 | PF08879 | WRC | 1.10E-21 | No_clan | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g01265 | - | - | csv:101205529 | 516.153 |