Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01265 ATGAACTTTGCAGAAATACCCATAAAAAAACTAGCACCTCCCAAGAACAACGTACCCTCCACCTCTCTGTCTTTCAAGCTTTCAAGAACAATGAATTCAAGTCCAAAGACCTGCACCACCTCTCCTTTCACACCAACTCAATGGCAAGAACTAGAACACCAAGCTTTGATCTTCAAATACATGGTTTCAGGAGTACCAATCCCTCCTGATCTAATCTTCTCTGTGAAAAGAAGCTTGGATTCCTCCCTTTCTGCAAGACTTTTCCCTCACCAACCCATTGGGTGGGGGTGTTTTGAGATGGGTTTTGGCAGAAAAACAGACCCAGAACCAGGAAGGTGCAGAAGAACAGATGGCAAAAAATGGAGATGCTCAAAAGAAGCTTTTCCAGACTCCAAATACTGCGAGAAACACATGCATAGAGGCAGAAATCGTTCAAGAAAGCCTGTGGAAATCTCTTCTTCCTCTTCTTCTTCTTCTTCTTCATCTTCAATGACCTGTGAAACTCAATCATATCACCAAGCTCCTCCTCCTGCTGCTGCTGCTTATCATGAATCCTCCATTCATCCATTTATGTATACTCAATCTTCCTCCTCCAGACCTCCCTGCTCTGATTTCCCTTCAAATAATACAAACCCTCAACTCTTTTTGTACTCAGGGACTCATTCTCAAGCTGATAAAGATTACAGGGATATTAATGGTTCAAGAGAGGGCGTTGGCGTGCAGGCTTTCTTTCCCTCGGTTGCTGAGGTTTATAATAATCAGCAGCCAATAGCGATGGATTCTTACAAAGGATGCTCCCAATTTGTTACTCAAAGCCACCAAATTTACAATTCTAAACAGGCAAGGCAAGAACAAGAGCAACACTGCTTTGTTTTGGGCACAGATTTCAATAAATCGTCAAAATCAGCTAAAGCAGAGGAAGAAGAACAAGAACAAGAACAAGATGGTGAAACCCAGAAGCCGCTACTCCATTTCTTTGAGGATTGCCCACCAAAAAACTCGGATTCCTGGCTTGATTTAGCCTCAAATTCAAGTATACAAAATGGAAATTTTATTGGGTTATGA 1065 42.07 MNFAEIPIKKLAPPKNNVPSTSLSFKLSRTMNSSPKTCTTSPFTPTQWQELEHQALIFKYMVSGVPIPPDLIFSVKRSLDSSLSARLFPHQPIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAFPDSKYCEKHMHRGRNRSRKPVEISSSSSSSSSSSSMTCETQSYHQAPPPAAAAYHESSIHPFMYTQSSSSRPPCSDFPSNNTNPQLFLYSGTHSQADKDYRDINGSREGVGVQAFFPSVAEVYNNQQPIAMDSYKGCSQFVTQSHQIYNSKQARQEQEQHCFVLGTDFNKSSKSAKAEEEEQEQEQDGETQKPLLHFFEDCPPKNSDSWLDLASNSSIQNGNFIGL 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10619218 10620624 + CmoCh14G012650.1 Cmo14g01265 396531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01265 354 PANTHER - 35 168 IPR031137 GO:0005634|GO:0006351|GO:0032502
Cmo14g01265 354 PANTHER - 154 348 IPR031137 GO:0005634|GO:0006351|GO:0032502
Cmo14g01265 354 ProSiteProfiles WRC domain profile. 107 151 IPR014977 -
Cmo14g01265 354 PANTHER GROWTH-REGULATING FACTOR 5 35 168 - -
Cmo14g01265 354 PANTHER GROWTH-REGULATING FACTOR 5 154 348 - -
Cmo14g01265 354 MobiDBLite consensus disorder prediction 300 325 - -
Cmo14g01265 354 Pfam QLQ 42 75 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cmo14g01265 354 MobiDBLite consensus disorder prediction 134 180 - -
Cmo14g01265 354 ProSiteProfiles QLQ domain profile. 42 77 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cmo14g01265 354 SMART QLQ_2 41 77 IPR014978 GO:0005524|GO:0005634|GO:0006355
Cmo14g01265 354 Pfam WRC 108 150 IPR014977 -
Cmo14g01265 354 MobiDBLite consensus disorder prediction 148 172 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g00038 Cmo14g01265 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00128 Cmo-Chr5:555941 Cmo14g01265 Cmo-Chr14:10619218 1.38E-44 dispersed
Cmo07g00639 Cmo-Chr7:2889815 Cmo14g01265 Cmo-Chr14:10619218 3.99E-39 dispersed
Cmo10g00789 Cmo-Chr10:3672292 Cmo14g01265 Cmo-Chr14:10619218 1.39E-63 dispersed
Cmo11g00738 Cmo-Chr11:3593611 Cmo14g01265 Cmo-Chr14:10619218 6.41E-66 dispersed
Cmo12g00548 Cmo-Chr12:3374799 Cmo14g01265 Cmo-Chr14:10619218 1.90E-42 dispersed
Cmo14g01265 Cmo-Chr14:10619218 Cmo20g00955 Cmo-Chr20:5195567 4.86E-59 dispersed
Cmo01g00038 Cmo-Chr1:125736 Cmo14g01265 Cmo-Chr14:10619218 4.26E-175 wgd
Cmo14g01265 Cmo-Chr14:10619218 Cmo05g01417 Cmo-Chr5:10884190 2.33E-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11015 PF08879 WRC 1.10E-21 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01265 - - csv:101205529 516.153