Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01304 ATGAGTCGAGAATCGAAGCGGGGAAAGCAGGACAAAGGTTCTGATGATGCTCAGAAAGTGATTGTTGCAGTGAAGGCTTCCAAAGAAATTCCTAAAACTGCACTTGTTTGGGCGTTGACTCATGTTGTTCAAATTGGTGATTGCATAACTTTGCTGGTTGTTGTTCCTTCTCAAAGCTCTGGTAGAAAATTCTGGGGTTTTCCGAGATTCGCTGGGGATTGTGCGAGTGGTCACAAGAAAGCTCACTCTGGAACGAGCTCGGAGCTGAAATGTGATATCACTGATTCATGTTCACAGATGATCCTTCAGCTTCATGATGTTTATGATCCAAATAAGATCAATGTGAAAATTAAGATTGTTTCGGCGTCGCCTACCGGGGCCGTGGCCGCTGAGGCCAAGAGAGCTCAAGCTAGCTGGGTTGTATTAGACAAACATCTCAAACATGAGGAGAAATGTTGCATGGAAGAGTTACAATGCAACATTGTCGTAATGAAGCGATCGCAGCCGAAAGTTCTTCGTTTGAACTTGGTTGGTTCTCCAAAGAAGGAACCAGACATGCCTTCTCCATTACCTTATTATATAGACGACGGGTCCGAAAGCAATCGAAAAGAAAACGATCCTCTCGATTTCATTCGAGGACCAGTTGTGACTCCCAATAGCAGTCCAGAGTTAGACACGCCTTTTACTGCTACCGAAGCTGGAACATCATCAGTGTCGAGCTCAGATCCTGGAACTTCTCCATTTTTCGTCTCGGAAATGAACGGAGACACGAAGAAAGAGGAGTTGTTTGTTATCAAGGAAAATAAAGAACTTGATGCTGCTAGTTCAGACTCAGATATTGAGAATTTATCTGTTTCTTCGAGGAGTTTAAGGTTCCAACCATGGATGTCAGAACTTCTAAGTTCTCATCTTCAATCCTCTCAACACATTGGAAGGCCACAAAGATGTGATGATAGGAATCAAATGTCGACAAGAAAATCTTCAAAACTCGACAGAGAATCTAGCATTGGAATGTCGAGCCATATAAGCGACAATGATTTCCATGGCGATGTACGAGATGCAGTGTCATTATCCAGGAACACGCCGCCCGGCCCTCCTCCCTTATGCTCAATATGCCAACACAAGGCACCAGTTTTCGGAAAGCCTCCGAGGTGGTTCAGCTATGCCGAGCTCGAGCTCGCTACAGGTGGATTTTCACAAGCCAACTTTTTGGCAGAAGGAGGATATGGATCTGTTCACCGAGGTGTCCTCCCGGACGGACAGGTGGTTGCTGTCAAGCAGCACAAACTGGCTAGTTCTCAAGGAGACCATGAATTTTGTTCCGAAGTCGAAGTTCTTAGCTGTGCACAGCATCGAAACGTCGTTTTGTTGATCGGATTTTGTATAGAGGAGAAAAGAAGGTTGTTGGTTTATGAATACATCTGCAATGGCTCATTGGATTCTCATTTATATGGACGACAGCAAGAGCCGTTAGAATGGTCTGCTCGACAAAAAGTTGCCGTGGGAGCTGCAAGGGGGCTACGATATCTCCATGAAGAATGTCGAGTCGGTTGCATTGTTCATCGGGATATGCGGCCGAACAACATTCTTATCACCCATGATTTCGAACCATTAGTTGGAGATTTTGGTCTTGCAAGATGGCAGCCCGACGGTGATACCGGTGTCGAGACGAGAGTTATTGGAACGTTTGGGTATTTGGCTCCAGAGTACGCTCAAAGCGGTCAAATCACCGAAAAAGCTGATGTTTATTCCTTCGGCGTGGTACTGGTGGAGCTAATTACCGGAAGAAAAGCGGTTGACCTTAACCGACCAAAAGGTCAACAGTGTCTCACTGAATGGGCACGCCCCCTGTTGGATGAGTTCCTCATTGATGAACTGATTGATCCAAGGTTGGGAAATAGCTTTGCCGAAAACGAAGTGTACTGTATGCTGCACGCTGCATCGTTATGCATCCGAAGAGATCCGAACGCGAGGCCTCGTATGTCACAGGTTTTACGGATTCTAGAGGGCGATCTCATCATGGATGCTAATTACTTGTCGACACCCGGTTACGACGTGGGTAATCGTAGCGGTCGGATGTGGACTGAGCAGCAGCAGCAAAACTACAGTGGCTCGTTATCGGACGAGACGCTCGAGAGGTTCAATGAAAAGGTGTGTCTTGAGAGCTTAAGATCAGGTGGTTACTGGGAGAGGGACAAGACAAGGAGGAGTTCAAGTGGCAGTAATTTGTAA 2232 46.28 MSRESKRGKQDKGSDDAQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSSGRKFWGFPRFAGDCASGHKKAHSGTSSELKCDITDSCSQMILQLHDVYDPNKINVKIKIVSASPTGAVAAEAKRAQASWVVLDKHLKHEEKCCMEELQCNIVVMKRSQPKVLRLNLVGSPKKEPDMPSPLPYYIDDGSESNRKENDPLDFIRGPVVTPNSSPELDTPFTATEAGTSSVSSSDPGTSPFFVSEMNGDTKKEELFVIKENKELDAASSDSDIENLSVSSRSLRFQPWMSELLSSHLQSSQHIGRPQRCDDRNQMSTRKSSKLDRESSIGMSSHISDNDFHGDVRDAVSLSRNTPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPDGQVVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVLLIGFCIEEKRRLLVYEYICNGSLDSHLYGRQQEPLEWSARQKVAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLNRPKGQQCLTEWARPLLDEFLIDELIDPRLGNSFAENEVYCMLHAASLCIRRDPNARPRMSQVLRILEGDLIMDANYLSTPGYDVGNRSGRMWTEQQQQNYSGSLSDETLERFNEKVCLESLRSGGYWERDKTRRSSSGSNL 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10897387 10901795 - CmoCh14G013040.1 Cmo14g01304 396570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01304 743 MobiDBLite consensus disorder prediction 219 252 - -
Cmo14g01304 743 MobiDBLite consensus disorder prediction 304 349 - -
Cmo14g01304 743 ProSitePatterns Tyrosine protein kinases specific active-site signature. 519 531 IPR008266 GO:0004672|GO:0006468
Cmo14g01304 743 CDD STKc_IRAK 404 670 - -
Cmo14g01304 743 Gene3D Phosphorylase Kinase; domain 1 370 473 - -
Cmo14g01304 743 SUPERFAMILY Protein kinase-like (PK-like) 382 677 IPR011009 -
Cmo14g01304 743 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 15 703 - -
Cmo14g01304 743 CDD USP_Like 19 145 - -
Cmo14g01304 743 Pfam Protein tyrosine and serine/threonine kinase 402 666 IPR001245 GO:0004672|GO:0006468
Cmo14g01304 743 ProSiteProfiles Protein kinase domain profile. 398 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01304 743 MobiDBLite consensus disorder prediction 312 332 - -
Cmo14g01304 743 Gene3D Transferase(Phosphotransferase) domain 1 474 678 - -
Cmo14g01304 743 MobiDBLite consensus disorder prediction 197 252 - -
Cmo14g01304 743 Gene3D HUPs 3 154 IPR014729 -
Cmo14g01304 743 PANTHER OS01G0253100 PROTEIN 15 703 IPR045271 GO:0004714|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g00071 Cmo14g01304 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02526 Cmo-Chr4:18577828 Cmo14g01304 Cmo-Chr14:10897387 5.87E-106 dispersed
Cmo09g00177 Cmo-Chr9:788703 Cmo14g01304 Cmo-Chr14:10897387 0 dispersed
Cmo14g01304 Cmo-Chr14:10897387 Cmo12g01280 Cmo-Chr12:11331888 3.98E-99 dispersed
Cmo01g00071 Cmo-Chr1:295611 Cmo14g01304 Cmo-Chr14:10897387 0 wgd
Cmo10g00735 Cmo-Chr10:3362845 Cmo14g01304 Cmo-Chr14:10897387 0 wgd
Cmo11g00692 Cmo-Chr11:3335644 Cmo14g01304 Cmo-Chr14:10897387 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74857 PF07714 PK_Tyr_Ser-Thr 8.10E-41 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01304 - - csv:101206876 1395.18