Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01322 ATGGTGGGGTCTCTCTGCCCCCTTCTTCAAACTTCAACTCATTTGATCTCTCAAGAAACTGAGTTTCAGAGAACGAGAATCAGAATGGGGAAGGCAACGAGGTGGTTGAGGACGTTATTGGGGATGAAGAGAGAAAAGAACGCCGATCAGAATTCATGTGATAAAAGAGAGAAGAATCGCTGGAGTTTCTCCAAATCTGGGAAGGAATTCACTGGAAAAGTTCAGAATCTGCCACCGCCGCCGCCGAGAAAAGCGGTGGCGGACGCCGATTGGCAGAGATCCTATAATACAGAAACAGAAGAAGAGCGGAATGAGCATGCGATTGCCGTCGCCGCCGCGTCGGCTGCTGCTGCTGATGCCGCTATGGCGGCTGCTCAGGCGGCTGTGGCGGTTGTTAGGCTGACGAATCAAACCAGAGGAGGTGCTCTGTTCTATGGAGGGAATGAGATTATGGCGGCTCTTAAAATTCAAAACGTTTTCAGGGGATTTTTGGCAAGAAAGGCGCTTCGAGCGTTAAGAGGATTGGTGAAATTACAAGCTTTAGTTAGAGGATTTCTCGTTCGAAAACGAGCTGCTGCAACTTTACAGAGCATGGAAGCTCTGTTCCGAGCACAAACCACCGTCCGATCACAGCGTGCTCGTAGTCGTTCCAATAACGAAGAGAACAAATCCCAACCGGAGAAGTCGGCGGACATCGACGTCAGATCCCTTTACTCCAACGAAATTGAAGACCCAAAAATCGTGGAAATCGACACACTCTTCAGAAGACCCAAATCAAGATCCCGTCGATTCAACAGCCTTCTCCCGGAGTTGGCGGACGACCGGGCATCGCCGTATCTCTGGACAATGGCGTCGCCGGCGAGATTCTCGGGAGGGGAGTGGTTTTTTGCGGGTGGAGAGGAATGTGGGCGGATGTCGACGCCGACGGCACACAGCACGCCACGAGTGGGGAACAGCGGGTGGGGGGCGGCGGCGGGGGTAGCGACGCCGACGAGGAGCGTGTATGGGGAGGGGTATTTTCGTGGATATTCGAATTATCCGAATTACATGGCGAGTACGCAGTCGTTTAAGGCGAAATTGAGGTCGCGAAGTGCGCCGAAACAGAGGCCGGAGGTGTGGACGAAGAAAAGGGCGGCGTGGAATGAGGTGATAGGGCCGAGAAACAGCATTAGCAGCGTTAGGATGCAGAAAAGTAGCCGCGGAGAAGAAGAAGGATTTTATGAACTGTGA 1230 52.68 MVGSLCPLLQTSTHLISQETEFQRTRIRMGKATRWLRTLLGMKREKNADQNSCDKREKNRWSFSKSGKEFTGKVQNLPPPPPRKAVADADWQRSYNTETEEERNEHAIAVAAASAAAADAAMAAAQAAVAVVRLTNQTRGGALFYGGNEIMAALKIQNVFRGFLARKALRALRGLVKLQALVRGFLVRKRAAATLQSMEALFRAQTTVRSQRARSRSNNEENKSQPEKSADIDVRSLYSNEIEDPKIVEIDTLFRRPKSRSRRFNSLLPELADDRASPYLWTMASPARFSGGEWFFAGGEECGRMSTPTAHSTPRVGNSGWGAAAGVATPTRSVYGEGYFRGYSNYPNYMASTQSFKAKLRSRSAPKQRPEVWTKKRAAWNEVIGPRNSISSVRMQKSSRGEEEGFYEL 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11042130 11044026 - CmoCh14G013220.1 Cmo14g01322 396588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01322 409 Gene3D - 149 200 - -
Cmo14g01322 409 ProSiteProfiles IQ motif profile. 173 200 IPR000048 GO:0005515
Cmo14g01322 409 PANTHER - 29 401 - -
Cmo14g01322 409 MobiDBLite consensus disorder prediction 209 230 - -
Cmo14g01322 409 ProSiteProfiles IQ motif profile. 149 177 IPR000048 GO:0005515
Cmo14g01322 409 Pfam IQ calmodulin-binding motif 151 170 IPR000048 GO:0005515
Cmo14g01322 409 Pfam IQ calmodulin-binding motif 176 190 IPR000048 GO:0005515
Cmo14g01322 409 Pfam Protein of unknown function (DUF4005) 323 392 IPR025064 -
Cmo14g01322 409 MobiDBLite consensus disorder prediction 214 230 - -
Cmo14g01322 409 PANTHER IQ-DOMAIN 5-RELATED 29 401 - -
Cmo14g01322 409 SMART iq_5 148 170 IPR000048 GO:0005515
Cmo14g01322 409 SMART iq_5 171 192 IPR000048 GO:0005515
Cmo14g01322 409 MobiDBLite consensus disorder prediction 68 88 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g00706 Cmo14g01322 CCT
Cmo14g01322 Cmo17g00728 CCT
Cmo08g00706 Cmo14g01322 ECH
Cmo14g01322 Cmo17g00728 ECH
Cmo01g00094 Cmo14g01322 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01322 Cmo-Chr14:11042130 Cmo14g01779 Cmo-Chr14:13719051 1.33E-32 dispersed
Cmo01g00094 Cmo-Chr1:424535 Cmo14g01322 Cmo-Chr14:11042130 8.01E-163 wgd
Cmo10g00702 Cmo-Chr10:3221407 Cmo14g01322 Cmo-Chr14:11042130 1.28E-82 wgd
Cmo11g00664 Cmo-Chr11:3196822 Cmo14g01322 Cmo-Chr14:11042130 2.44E-82 wgd
Cmo14g01322 Cmo-Chr14:11042130 Cmo17g00728 Cmo-Chr17:7275951 6.09E-88 wgd
Cmo14g01322 Cmo-Chr14:11042130 Cmo08g00706 Cmo-Chr8:4464506 5.70E-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01322 - - cmos:111457981 766.148