Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01324 ATGTTTTCGTCAATGAATCCTGTACGGTTTCCCAGTTTGGTCTTCCTTCTATGCTTTGCCCTTCTTCTTCAACATCATTCCCTCTGTTTCTCTTATCCCATGCCCTTAAATTGTACGGACACGACCCGTTTATGCACCTCGTTTCTGGCCTTCGAGCCTCGCCCAAATCAGACGCTTTCTGTGATCCAGAGTATGTTCGACGTATTGCCTGAAGATGTCACTGTCGAAGGAAATGGTCGGGATTACGTGTTTATTAGGAAGAACTGCTCCTGTGCTTCTGGGTTGAAGAAATATATAACCAACACAACTCTTACCATCAAATCCAATCGAGGGTATGTCTATGACATAGTCATGGAAGCGTATGATGGGCTTGCGCTGTTGCCCAATACAACCCGATTGGCGAGGAACGGTGCTGTTGTGTCTTTGAGGCTGTTTTGTGCCTGTTCAAGTGGGTTGTGGAACTATTTGATGAGCTATGTGATGAGAGATGGCGATACCATAGCGTCTTTGGCTAGCCGATTTGGGGTCAGTATGGATAGCATTGAGTCGGTGAATGGAATTGAAAATCCAGGCAATGTCACTGTGGGTGCTTTGTATTATATTCCCTTGAATTCGGTTCCTGGCGATCCCTATCCATTGGAGACAGACATTTCTGCTGCTCCTGCTCCAGCTCCTTCCTTTACTCTGAACAATATCACAGATAATGCTGAAACCCCCAAACGTGATCCTCCATATATATGGATTGTTGGAAGTTTGGGAATTATTCTTGTTCTGATTTTAGTTGGCATAGTAAGTTATGCTTGCTTCAGGTGGTTGAAATGCTTTTCTAGATCAAGGAGTAGCCACTCCAAAGATCCCGGTGGCAAGGTTCCCCACAAGTTCCATATTCTTGGCAAGTCAAGTTTCTGCTGTGCTTCAGGAAGGTACATTTGCTGCAGTTCTGCAGGTTGGAAGCAAGCCAACGGGGAGTCTAGTGACAACCAGAGTGCATTCCCGAAAGTTATCGAGAGCAATGTATTTGACGTAGACAAACCTGTGGTTTTTTCATATGAAGAAATTTTTTCCTCAACCGATGGTTTCTCTGATTCGAGTCTACTTGGCCATGGAACTTATGGTTCAGTGTATTATGGTATCCTGCGTGACCAGGAAGTTGCTATAAAAAGAATGACTGCAACAAAAACTAAAGAGTTCATGGCAGAGATGAAAGTCCTGTGCAAGGTTCATCATGCAAACCTGGTAGAATTGATTGGTTATGCAGCCAGTGAGGAGGAGCTCTTCCTTATTTATGAATATGCTCAAAAAGGTCCCCTCAAAAGTCATTTACATGATCCTCTGAACAAGGGGCATACGCCACTATCTTGGATTATGAGACTCCAAATTACTTTAGATGCTGCTAGAGGTCTCGAATACATTCACGAGCATACTAAAACTCATTACGTCCACAGAGATATCAAGACAAGCAACATCTTACTTGATGGTTCTTTTAGAGCAAAGATTTCTGACTTTGGGTTGGCCAAGCTTGTTGGAAAAACAAATGAGGGTGAAGCTACTGTAACGAAAGTTGTCGGTACATACGGTTACCTGGCTCCCGAATATTTGAGTAATGGGCTTGCGACAACGAAAAGTGATGTGTATGCTTTCGGTGTCGTTCTTTTTGAGCTTATATCTGGAAAGGAGGCAATTATACGAACTGAGGGAACGACTATGAGAAATCCTGAAAGACGTTCACTAGCATCAGTTATGTTAGCTGTTCTTCGGAACGCTCCTGATTCTATGAATATGGCAAGTTTGAAAGATCAAGTTGATCCAAGTATGATGGATTTGTATCCTCATGACTGTCTATTCAAGGTGGCCATGTTGGCAAAGCAGTGTGTGGATGAGGATCCCATATTACGACCCGACATGAAGCAAGTCGTAATATCCTTGTCGCAGATCCTACTGTCTTCGGTCGAATGGGAAGCGACTCTAGCTGGTAACAGCCAAGTTTTTAGTGGCCTTGTCCAAGGAAGATAG 2013 43.67 MFSSMNPVRFPSLVFLLCFALLLQHHSLCFSYPMPLNCTDTTRLCTSFLAFEPRPNQTLSVIQSMFDVLPEDVTVEGNGRDYVFIRKNCSCASGLKKYITNTTLTIKSNRGYVYDIVMEAYDGLALLPNTTRLARNGAVVSLRLFCACSSGLWNYLMSYVMRDGDTIASLASRFGVSMDSIESVNGIENPGNVTVGALYYIPLNSVPGDPYPLETDISAAPAPAPSFTLNNITDNAETPKRDPPYIWIVGSLGIILVLILVGIVSYACFRWLKCFSRSRSSHSKDPGGKVPHKFHILGKSSFCCASGRYICCSSAGWKQANGESSDNQSAFPKVIESNVFDVDKPVVFSYEEIFSSTDGFSDSSLLGHGTYGSVYYGILRDQEVAIKRMTATKTKEFMAEMKVLCKVHHANLVELIGYAASEEELFLIYEYAQKGPLKSHLHDPLNKGHTPLSWIMRLQITLDAARGLEYIHEHTKTHYVHRDIKTSNILLDGSFRAKISDFGLAKLVGKTNEGEATVTKVVGTYGYLAPEYLSNGLATTKSDVYAFGVVLFELISGKEAIIRTEGTTMRNPERRSLASVMLAVLRNAPDSMNMASLKDQVDPSMMDLYPHDCLFKVAMLAKQCVDEDPILRPDMKQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11058469 11064317 + CmoCh14G013240.1 Cmo14g01324 396590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01324 670 SMART LysM_2 158 202 IPR018392 -
Cmo14g01324 670 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 36 670 IPR044812 GO:0019199|GO:0045087
Cmo14g01324 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Cmo14g01324 670 Gene3D Phosphorylase Kinase; domain 1 333 431 - -
Cmo14g01324 670 Gene3D Transferase(Phosphotransferase) domain 1 433 657 - -
Cmo14g01324 670 ProSiteProfiles Protein kinase domain profile. 360 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01324 670 Pfam Protein tyrosine and serine/threonine kinase 365 640 IPR001245 GO:0004672|GO:0006468
Cmo14g01324 670 SUPERFAMILY Protein kinase-like (PK-like) 342 642 IPR011009 -
Cmo14g01324 670 ProSitePatterns Protein kinases ATP-binding region signature. 366 387 IPR017441 GO:0005524
Cmo14g01324 670 SMART serkin_6 360 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01324 670 CDD LysM 158 201 IPR018392 -
Cmo14g01324 670 SUPERFAMILY LysM domain 157 202 IPR036779 -
Cmo14g01324 670 PANTHER BNAA06G02020D PROTEIN 36 670 - -
Cmo14g01324 670 Pfam LysM domain 159 196 IPR018392 -
Cmo14g01324 670 Gene3D LysM domain 154 207 IPR036779 -
Cmo14g01324 670 ProSiteProfiles LysM domain profile. 157 201 IPR018392 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g00097 Cmo14g01324 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01324 Cmo-Chr14:11058469 Cmo14g01807 Cmo-Chr14:13827129 3.00E-64 dispersed
Cmo02g00905 Cmo-Chr2:5591856 Cmo14g01324 Cmo-Chr14:11058469 6.79E-42 transposed
Cmo04g01451 Cmo-Chr4:7439295 Cmo14g01324 Cmo-Chr14:11058469 5.70E-43 transposed
Cmo04g01841 Cmo-Chr4:9256898 Cmo14g01324 Cmo-Chr14:11058469 1.58E-124 transposed
Cmo11g01885 Cmo-Chr11:13119060 Cmo14g01324 Cmo-Chr14:11058469 4.62E-92 transposed
Cmo18g00901 Cmo-Chr18:10261619 Cmo14g01324 Cmo-Chr14:11058469 4.80E-46 transposed
Cmo01g00097 Cmo-Chr1:440326 Cmo14g01324 Cmo-Chr14:11058469 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74860 PF07714 PK_Tyr_Ser-Thr 3.80E-49 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01324 - - csv:101213624 1211.82