Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01361 ATGGAGAATCTCAGGACTCCATTTAGGGGTATTGTGGATGATATCAGAGGAAGAAAAGCCTGTTATAAGCAAGATTGGGTTGATGGTCGACTTTCAGGAATCGGAATTTTGGCCCCAACTGCCTACGTTTTTTTCGCTTCTGCACTTCCTGTCATTGCTTTCGGTGCGCAACTGAGCCGAGATACAGATGGAAGCTTGAGTGCAGTAGAAACATTGGCTTCCACAGCCATTTGTGGCATCCTTCATTCAATTCTTGGTGGGCAGCCTCTCCTAATTGTAGGTGTTGCAGAACCTACAATTATTATGTATACCTATTTGTACAATTTTAGCAAGGATAGGAAAGATATAGGGGGAGACCTCTTCTTGGCTTGGGCCGGATGGGTTTGCGTCTGGACAGCCCTCTTGCTGTTTCTTCTTGCTATATTCAATGCTTCCAGACTAATCAACAGATTTACAAGGATTGCAGGGGAGCTTTTTGGCATGTTAATCTCCGTTCTGTTCATTCAAGAAGCTATTAAGGGAGTGTTGAGTGAATTTGAAGTTCCCCATGCTGAGGATAAAAGTTTAGAGAAATATCAATTTCATTGGCTTTACACGAATGGATTACTGGGAATCATATTTACTTTTGGCCTTCTCTATACTGCCTTGAAGAGCAGAAAGGCAAGATCATGGTTGTATGGGACAGGTTTGTCAATGCAACGCAGATTGATTCTCTTGTGCAATTACTCCCATGAACGTTCTAAGCATACTTATAAACTCTCACTGTGTCCCATAGGCTGGCTAAGGAGTTTCATTGCAGACTACGGAGTTCCTCTGATGGTTCTAGTATGGACTGCACTATCATTTGCTGTACCAAGCAAAGTCCCCTCTGGAGTTCCTAGAAGACTTCAAAGTCCTTTGGCATGGCAATCTACTTCTCTGCACCATTGGACAGTTGTCATGGACATGGGGAAGATACCTCCCGCATACATTTTTGCGGCCTTTATTCCTGCTGTAATGATTGCAGGACTTTATTTTTTTGATCATAGTGTTGCATCGCAGCTGGCACAGCAAAAGGAGTTTAATCTCAAGAACCCTTCTGCATACCACCATGACATCATGTTGCTGGGGTTTATGACGTTGCTTTGCGGATTAATCGGGCTTCCTCCTTCAAATGGGGTTTTGCCACAGTCCCCCATGCACACCAAGTGTCTTGCAACTCTCAGAAGGCGTTTGATGCGAAGGAAGATGGTAGAAAGTGCAAAGGAAGGCATAAAAAGGAAAGCTAGTGATTCCGAAATCTACGGTCAAATGCAAGCTGTGTTCTTAGAAATGGAGAGCAGCCCAATTACGACATCAGTAGTCAAAGAGCTGGAAGATTTGAAGGAGGCAATCATGAAAGGTGATACTAATCATGAAAACACTAAGGATACATTTGACCCAGAGAAGCATATTGATGCTTATCTTCCTGTTCGAGTGAACGAGCAAAGATTGAGCAATCTGCTGCAATCACTTCTGGTGGCAGCATCAGTGTTTGCTTTACCAGCAATAAAGAAGATACCAACATCAGTTCTCTGGGGATATTTTGCGTACATGGCCATCGACAGTCTACCTGGAAACCAATTTTGGGAAAGGATTTTACTTCTCTTTGTAATGCCTAGTCGACGTTACAAGGTCTTAGAAGGCTTTCATGCTTCCTTTGTGGAGTCTGTGCCATTCAAATACATAGCCGCATTCACTCTATTCCAATTTGTATATTTTCTCATTTGTTATGGAGTGACTTGGATCCCCATAGCTGGAGTGTTGTTTCCTTTGCCTTTCTTCCTCCTCATTGGCATAAGACATCGCATCCTTCCCAAGCTACTCCAACCCCGTTATTTGCAGGAGCTCGACGCAGCTGAGTATGAAGAACTAACCGGTACTCCGACTGTCTCGCTTAGCCTTTCTATCAAGGAAATGAATACCCCTCAAATGGTTAATAATGAAGATGAAGTTGAAATATGTGATGCTGAAATACTAGATCAGTTGACAACCCACAGAGGGGAGTTGAAGGTTAGAGCTAAAAGCTTCAACGAGGATAGACAGGGTCAGATAAGGAAATAA 2082 43.18 MENLRTPFRGIVDDIRGRKACYKQDWVDGRLSGIGILAPTAYVFFASALPVIAFGAQLSRDTDGSLSAVETLASTAICGILHSILGGQPLLIVGVAEPTIIMYTYLYNFSKDRKDIGGDLFLAWAGWVCVWTALLLFLLAIFNASRLINRFTRIAGELFGMLISVLFIQEAIKGVLSEFEVPHAEDKSLEKYQFHWLYTNGLLGIIFTFGLLYTALKSRKARSWLYGTGLSMQRRLILLCNYSHERSKHTYKLSLCPIGWLRSFIADYGVPLMVLVWTALSFAVPSKVPSGVPRRLQSPLAWQSTSLHHWTVVMDMGKIPPAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKNPSAYHHDIMLLGFMTLLCGLIGLPPSNGVLPQSPMHTKCLATLRRRLMRRKMVESAKEGIKRKASDSEIYGQMQAVFLEMESSPITTSVVKELEDLKEAIMKGDTNHENTKDTFDPEKHIDAYLPVRVNEQRLSNLLQSLLVAASVFALPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVMPSRRYKVLEGFHASFVESVPFKYIAAFTLFQFVYFLICYGVTWIPIAGVLFPLPFFLLIGIRHRILPKLLQPRYLQELDAAEYEELTGTPTVSLSLSIKEMNTPQMVNNEDEVEICDAEILDQLTTHRGELKVRAKSFNEDRQGQIRK 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11281181 11286188 + CmoCh14G013610.1 Cmo14g01361 396627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01361 693 Pfam HCO3- transporter family 260 403 IPR011531 GO:0006820|GO:0016021
Cmo14g01361 693 Pfam HCO3- transporter family 484 574 IPR011531 GO:0006820|GO:0016021
Cmo14g01361 693 Pfam HCO3- transporter family 7 181 IPR011531 GO:0006820|GO:0016021
Cmo14g01361 693 PANTHER ANION EXCHANGE PROTEIN 1 692 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cmo14g01361 693 Gene3D Helical hairpin bin 18 60 - -
Cmo14g01361 693 PANTHER BORON TRANSPORTER 4-RELATED 1 692 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo12g00272 Cmo-Chr12:1739477 Cmo14g01361 Cmo-Chr14:11281181 0 dispersed
Cmo13g00915 Cmo-Chr13:8095554 Cmo14g01361 Cmo-Chr14:11281181 0 dispersed
Cmo14g00972 Cmo-Chr14:5192107 Cmo14g01361 Cmo-Chr14:11281181 0 dispersed
Cmo14g01361 Cmo-Chr14:11281181 Cmo05g00417 Cmo-Chr5:1919077 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01361 K24194 - csv:101210964 1142.49