Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01393 ATGGCCCTTCGCCTAATGTTCTGCTGTGGAATTGGTTCGGATCGGAAAGAAAGAGGGAAGAAACAGCAAACATGGAGGGTGTTTTCATTGAAGGAATTACACTCAGCCACAAATAATTTTAACTATGATAACAAACTTGGAGAAGGAGGATTTGGTAGCGTTTATTGGGGTCAGCTATGGGATGGATCACAAATTGCAGTGAAGAGGTTGAAGGCTTGGAGCAACAAGGCAGACATGGAATTCTCTGTGGAAGTCGAGATACTGGCTCGAGTTAGGCACAAGAATCTATTGAGTTTACGTGGCTACTGTGCCGAAGGGCAAGAACGCTTGATCGTGTACGACTACATGCCCAATCTAAGTCTACTCTCCCATTTACATGGACATCACGCATCAGAATGCCATCTCGATTGGAAACGTCGCATGAAAATCGCGGTTGGATCTGCCGAGGGAATTGCTTATCTTCACCACCAAGCAACTCCCCACATCATTCATCGAGATATCAAAGCTAGTAATGTTTTGCTAGATCCAGATTTCCAAGCTCGTGTCGCCGACTTTGGATTCGCAAAACTCATCCCCGACGGTGCAACACATGTAACTACAAGAGTCAAAGGCACACTCGGATACCTCGCACCTGAATATGCTATGTTAGGTAAGGCATCAGAAAGTTGTGACGTATACAGCTTCGGCATTCTCCTTCTTGAGCTCGCCACTGGCAAGAGACCTCTTGAGAAGTCAAGTGCAACAACAAAACGCACAATCGTAGATTGGGCGTTACCGTTAGTAGTTGAGAAAAAGATTAACGAACTTGCAGACCCAAAGCTAAATGGAGATTACAACGCAGACGAGCTAAAGAGAGTCGTCCTTGTTGCACTCAGATGCTCCCATTCACGGCCAGAGAAACGACCGATCATGGTCGAGGTGGTAGAGCTGCTAAAAGGAGAATCAAAAGAGAAGGTAGCTAAATTAGAAGATGATGAACTGTTCAAGAGCCATGAAGTAGACGCACAATCTACAGAAATAGCAGCTGGTGAAGACAGCTCAGAGTTCATATCAGAAGAAAAGGATTGA 1068 45.22 MALRLMFCCGIGSDRKERGKKQQTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKAWSNKADMEFSVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGHHASECHLDWKRRMKIAVGSAEGIAYLHHQATPHIIHRDIKASNVLLDPDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGKRPLEKSSATTKRTIVDWALPLVVEKKINELADPKLNGDYNADELKRVVLVALRCSHSRPEKRPIMVEVVELLKGESKEKVAKLEDDELFKSHEVDAQSTEIAAGEDSSEFISEEKD 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11465840 11469678 + CmoCh14G013930.1 Cmo14g01393 396659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01393 355 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Cmo14g01393 355 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01393 355 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01393 355 PANTHER OS01G0750732 PROTEIN 1 355 - -
Cmo14g01393 355 MobiDBLite consensus disorder prediction 333 355 - -
Cmo14g01393 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Cmo14g01393 355 SUPERFAMILY Protein kinase-like (PK-like) 23 311 IPR011009 -
Cmo14g01393 355 Pfam Protein kinase domain 41 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01393 355 Gene3D Phosphorylase Kinase; domain 1 12 115 - -
Cmo14g01393 355 PANTHER BNAA05G14800D PROTEIN 1 355 - -
Cmo14g01393 355 CDD STKc_IRAK 46 313 - -
Cmo14g01393 355 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g00160 Cmo14g01393 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01393 Cmo-Chr14:11465840 Cmo11g00619 Cmo-Chr11:2957148 5.10E-93 dispersed
Cmo16g00169 Cmo-Chr16:769031 Cmo14g01393 Cmo-Chr14:11465840 6.00E-145 transposed
Cmo01g00160 Cmo-Chr1:691507 Cmo14g01393 Cmo-Chr14:11465840 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74861 PF00069 Pkinase 1.40E-44 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01393 - - csv:101212993 655.595