Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01400 ATGTCGAAGCTTGTTTTGAAAGGGGGAAGTAGGCCACCATGGGTGGGTTTGGCTGCTGCTGTTTGGGTTCAAATAGCTGCTGGTTCTTCTTATAATTTCTCTCTTTACTCACACTTGCTTAAATCTGTTCTGGGTTTGAATCAGCAGCAGCTTACGGTTCTTGGAGTGGCTAATGACATTGGGGAGAGTGTGGGTTTGCTCCCTGGCCTTGCTTGTAACAGATTTCCCCCATGGGCTGTTCTTTTGGTCGGTGCTGTGTGTTGCTTTGTGGGTTATGGAGCTATTTGGCTTGCTGTTAGCAGGACTGTCCCCAATCTGCCTTATTGGCTGCTATGGCTCACACATTGTATTGCTACAAATAGCAATGCATGGTTTGGAACGGCCGTGCTCGTTACGAACATGAGAAACTTCCCTCTCAGCAGAGGTACCGTTGCTGGCATTCTTAAAGGTTATGTCGGGCTTAGCGCAGCTGTATATACGGTGATATACAGTATGGTGCTCAGAAAGTCTGCTTTGGATTTAGTGTTGTTTCTTGCGATCGGGATACCGATTTTGTGTTTAGCCTTGATGTACTTTGTTCGACCTTGTACTCCGGCTTCAACGGAGGACCCTTCTGAGCGTAATCATTTTCTTTTCACGCAAGCTGCTTGTGTTTTGCTAGCTGTTTTTTTAGTCTCGACCACAATCCTAGATGCAACGACGACCCCTAGCAATGCTGTTGCGTACACCTTAGTTGCCATAATGGTTGTCCTTTTAATGTCTCCTCTTGCTGTTCCCATAAAAATGACCATTTGTTCTGTTAAAACGAAAAAACTTGGCCCTCGAGTCGACTCTACCGAACCTTTGGCTTCTGGAGAAAGCGATTCTTCCCAAATAGAACCTTTATTGACCCCATCTTCCTCTGCTACAAATCTTGGAAGTTTCTACGAGAACGACGAATCATCGGATGTAGAAACACTTCTTGCTGTGGGAGAGGGGGCGATTCATAAGAAGAAAAGAAAACCGAAACGAGGGGAAGATTTCAAGCTCCGTGAAGCCGTGATCAAAGCTGATTTTTGGTTGCTTTGGTTCCTGTACTTCCTCGGGGTCGGTCCTGGAATAACGGTTCTCAACAATTTGTCTCAAATTGGGATTGCATTGGGTGTTAATGACACAACATTGCTGTTGGCTCTTTTCAGCTTCTGCAATTTCGTTGGTCGTCTAGGATCTGGCGTTATTTCCGAACACTTCGTCAGGTCGAGAATGATACCTCGGTCGTTGTGGATGATGTTTGCACTTATGCTTATGTCTGTAGCATTCCTACTGTATGCGTCCGCCCACACGGTTACTCTCTATGTCGCCACTGGTCTCATGGGAATCAGCTACGGAGTTCTATATGCTATGATGGTCCCTCTCGCATCCGAGATTTTCGGCCTAAAGAATTTCGGAGTAATCTTCAACTTCATGCAGCTGGGGAATCCGATAGGAGCAGTCCTTTTCTCGGTTCTACTCGCGAGTACTTTATACGACAATGAAGCTGCTAAGCAAGGTTCGATAACCTGCATAGGCCAAGAGTGCTTCAGGGTTACATTCTTCGTCCTCTCAGGCGTTGCCGGGTTAGGCTCGATCTTGTGCATCATTCTGACTGTTAGATTAAGGCCAGTGTATCAAATGCTGTACGCGGGTGGCTCGTTCCGGTTGCCTCAGAATTCAGGTCATTGA 1701 46.44 MSKLVLKGGSRPPWVGLAAAVWVQIAAGSSYNFSLYSHLLKSVLGLNQQQLTVLGVANDIGESVGLLPGLACNRFPPWAVLLVGAVCCFVGYGAIWLAVSRTVPNLPYWLLWLTHCIATNSNAWFGTAVLVTNMRNFPLSRGTVAGILKGYVGLSAAVYTVIYSMVLRKSALDLVLFLAIGIPILCLALMYFVRPCTPASTEDPSERNHFLFTQAACVLLAVFLVSTTILDATTTPSNAVAYTLVAIMVVLLMSPLAVPIKMTICSVKTKKLGPRVDSTEPLASGESDSSQIEPLLTPSSSATNLGSFYENDESSDVETLLAVGEGAIHKKKRKPKRGEDFKLREAVIKADFWLLWFLYFLGVGPGITVLNNLSQIGIALGVNDTTLLLALFSFCNFVGRLGSGVISEHFVRSRMIPRSLWMMFALMLMSVAFLLYASAHTVTLYVATGLMGISYGVLYAMMVPLASEIFGLKNFGVIFNFMQLGNPIGAVLFSVLLASTLYDNEAAKQGSITCIGQECFRVTFFVLSGVAGLGSILCIILTVRLRPVYQMLYAGGSFRLPQNSGH 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11493196 11496726 + CmoCh14G014000.1 Cmo14g01400 396666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01400 566 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 566 - -
Cmo14g01400 566 SUPERFAMILY MFS general substrate transporter 333 547 IPR036259 -
Cmo14g01400 566 MobiDBLite consensus disorder prediction 274 299 - -
Cmo14g01400 566 Gene3D MFS general substrate transporter like domains 7 276 IPR036259 -
Cmo14g01400 566 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 566 - -
Cmo14g01400 566 MobiDBLite consensus disorder prediction 282 299 - -
Cmo14g01400 566 CDD MFS_Mch1p_like 12 534 - -
Cmo14g01400 566 Pfam Nodulin-like 13 260 IPR010658 -
Cmo14g01400 566 SUPERFAMILY MFS general substrate transporter 11 199 IPR036259 -
Cmo14g01400 566 Gene3D MFS general substrate transporter like domains 347 549 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g03096 Cmo-Chr4:21556380 Cmo14g01400 Cmo-Chr14:11493196 3.12E-115 dispersed
Cmo11g01732 Cmo-Chr11:12254138 Cmo14g01400 Cmo-Chr14:11493196 1.24E-107 dispersed
Cmo14g01400 Cmo-Chr14:11493196 Cmo15g00075 Cmo-Chr15:395182 1.19E-116 dispersed
Cmo01g00172 Cmo-Chr1:758137 Cmo14g01400 Cmo-Chr14:11493196 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01400 - - csv:101211550 1042.34