Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01424 ATGGCCGACGACAAAGTGGGCGAAGGCAACAACAACTTGGGTAGCCGAAAGCCTTCATGGGCAACCCTCCGCCGTGTCGACTCGCTCAATCTCGAGGCTGGAAGGGTTCCGGCCGCCACCGCTCATCAACCTTACAGGGTGAATTGGCAAAGGACTTTGAGCTTGGCGTTTCAGAGCATGGGAGTAGTGTATGGCGACATCGGAACATCACCGTTGTACGTGTTTGCGAGCACTTTCAGCAACGGCATCGACAACACGGAGGACGTGATCGGAGTTCTGTCGCTTATAATCTACACCATAGCGTTGGTTCCATTATTGAAGTACGTTTTGATTGTGTTGTGGGCGAATGACAACGGCGACGGTGGGACCTTCGCTCTATATTCGCTGCTGTGCCGGTACGTGAAAGTGGGATTGATTCCAAATGACCAGCCGGAGGACAGGGAACTGTCCAATTACCAGCTGGTCGTGCCTTCCAACCTGAGACGGTCTCAGAAGGTGAAGGACAAGCTTGAGAACAGTATGTTTGCAAAGGTTGCCCTTTTTCTTGTCACCATTGCTGGGACTTCCATGGTTATTGGAGATGGGGTTCTCACTCCCGCTATCTCAGTGCTCTCGGCCGTGAGTGGAATCAAGTCACTAGGGACAGATGCGGTTGTGGGGATATCGGTAGCAATTCTTGTGATCCTGTTCAGCATTCAACGATTTGGAACAGACAAAGTGGGGTTCTCGTTTGCCCCAATAATCTTTATATGGTTTTCATTCATCGGTGGCATTGGCCTCTTCAACCTGTTCAAGCATGACCCTGCCGTTCTCAAAGCTTTTAACCCTAAGTATATCTTTGATTACTTCAAGAGAAATGGCAGGCAAGCTTGGGTTTCCCTTGGTGGAGTTTTTCTTTGCATTACAGGGACTGAAGCCATGTTTGCTGATTTGGGTCACTTCAATGTTCGAGCTATTCAGATTAGTTTCGGTTCTATCGTATTCCCTGCTTTGATAGCTGCCTACAGTGGGCAAGCTGCATATCTAAGAAAATTCCCGGGCCACGTCGGCAATACTTTCTACGATTCAATTCCAGGTCCTTTGTACTGGCCAACGTTCGTAGTTGCGGTGGCGGCATCAATCATAGCAAGCCAAGCAATGATCTCAGGAGCATTTGCAATAATATCACAGTCCTTGTCTCTAGGCTGCTTCCCCAGAGTTAAAGTCGTTCATACTTCACACAAGTACGAAGGCCAAGTCTACATCCCGGAGATCAATTACCTTCTAATGTTGGCTTGTGTCATCGTTAGCGCCGCCTTCCAAACCACGGAGAACATCGGCCACGCCTACGGCATCGCCGTCGTCACCGTCATGATCATGACCACTGGCATGGTTTCTCTCATCATGATCGTCATTTGGAAAACCAGCATTTGGTGGATCGCTTTGTTCCTTCTCGTCTTCGGCTCCATCGAGCTTCTCTACTTCTCATCCGTCCTCTATAAGTTCACTCAAGGAGGGTTTCTCCCCCTCGTCCTTGCCCTTTTCCTCATGGCTGTCATGATCGTTTGGCATTATGTTCATAGGGAGAGATACGTGTTCGAGCTCAAAAACAAGGTCTCCTCAGGCTACATAACCGAGTTGGCTTGTAACCCTAATGTCAACCGAATTCCTGGAATTGGCCTTCTCTACTCCGAGTTGGTTCAGGGTATTCCTCCTATCTTCCCTCACTTCATTTCCAGCATTCCCTCGGTTCATTCTGTCATCATTTTCGTCTCCATCAAGTCCATTCCGATCAGCAAAGTCGAGCCCAAGGAGCGGTTTTTGTTTCGGCACGTGGAGCCGAGGGAGTATCGAATGTTTCGGTGTGTGGTCAGATATGGATACAAAGACGTGATCACCGGATCAGCCGAGTTCGAGCGGCAGCTGGTGGACAGTTTGAAAGAATTCATACGCCAAGAACACATAATGCTGGAAGGGATCCCATTAGAGCCAACCTCAAACCAGAGCCACTCAGGCAAAATAGAACCAACAAAAGCAAAACCCTCTTCTTCATCTGCAGCAACAGTGCACGTCGAAGGAACTGCAGCGGAAGTAGCGAGCCAGTCACGGCGTTCGTCGGGGTCCATTCAGTCGTTCAACGCTTCAAAATCGAGGCACTCATCAAACGCCATAGCTGCGGGAGGGGCAGTAGAAGAAGAGATGCAGTTCGTAGAGAAAGCAATGGAGAAAGGCGTGGTTTATCTGTTGGGAGAAGCAGAGGTGGTGGCTGAGCCAGAATCTTCACTGTTTAAGAAGATAGTGGTGAATTATGCGTATAGTTTCTTGAGGAAGAACTTTAGGCAAGGGGAGAATATTCTTGAGATTCCTCGTACCAGGCTTCTAAGGGTTGGAATGACTTATGAAATATGA 2388 48.87 MADDKVGEGNNNLGSRKPSWATLRRVDSLNLEAGRVPAATAHQPYRVNWQRTLSLAFQSMGVVYGDIGTSPLYVFASTFSNGIDNTEDVIGVLSLIIYTIALVPLLKYVLIVLWANDNGDGGTFALYSLLCRYVKVGLIPNDQPEDRELSNYQLVVPSNLRRSQKVKDKLENSMFAKVALFLVTIAGTSMVIGDGVLTPAISVLSAVSGIKSLGTDAVVGISVAILVILFSIQRFGTDKVGFSFAPIIFIWFSFIGGIGLFNLFKHDPAVLKAFNPKYIFDYFKRNGRQAWVSLGGVFLCITGTEAMFADLGHFNVRAIQISFGSIVFPALIAAYSGQAAYLRKFPGHVGNTFYDSIPGPLYWPTFVVAVAASIIASQAMISGAFAIISQSLSLGCFPRVKVVHTSHKYEGQVYIPEINYLLMLACVIVSAAFQTTENIGHAYGIAVVTVMIMTTGMVSLIMIVIWKTSIWWIALFLLVFGSIELLYFSSVLYKFTQGGFLPLVLALFLMAVMIVWHYVHRERYVFELKNKVSSGYITELACNPNVNRIPGIGLLYSELVQGIPPIFPHFISSIPSVHSVIIFVSIKSIPISKVEPKERFLFRHVEPREYRMFRCVVRYGYKDVITGSAEFERQLVDSLKEFIRQEHIMLEGIPLEPTSNQSHSGKIEPTKAKPSSSSAATVHVEGTAAEVASQSRRSSGSIQSFNASKSRHSSNAIAAGGAVEEEMQFVEKAMEKGVVYLLGEAEVVAEPESSLFKKIVVNYAYSFLRKNFRQGENILEIPRTRLLRVGMTYEI 795
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11605386 11611149 - CmoCh14G014240.1 Cmo14g01424 396690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01424 795 MobiDBLite consensus disorder prediction 653 707 - -
Cmo14g01424 795 MobiDBLite consensus disorder prediction 655 683 - -
Cmo14g01424 795 MobiDBLite consensus disorder prediction 691 707 - -
Cmo14g01424 795 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 794 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo14g01424 795 TIGRFAM kup: potassium uptake protein 55 795 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo14g01424 795 Pfam K+ potassium transporter 56 623 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo14g01424 795 PANTHER POTASSIUM TRANSPORTER 5 14 794 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00419 Cmo-Chr4:2077457 Cmo14g01424 Cmo-Chr14:11605386 0 dispersed
Cmo04g02031 Cmo-Chr4:10959569 Cmo14g01424 Cmo-Chr14:11605386 0 dispersed
Cmo14g01424 Cmo-Chr14:11605386 Cmo17g01086 Cmo-Chr17:8972728 0 dispersed
Cmo14g01424 Cmo-Chr14:11605386 Cmo14g00914 Cmo-Chr14:4840633 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01424 K03549 - csv:101205628 1250.34