Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01474 ATGATTGCGAGCTCTCTTTGCAATGCTTCTGCTAAATTTCCGGCAGAAGTGATGGAGGTAGAAACGATGATGGAACATAAGAGAAGTCTATGCTCTGTTGATGAGAGCAGTCTCACTTCTCTTACATCCAAGCGACACAAGACTGGTTTTTCTATCTCCTCTAAGGAGAGGAAAGACAAACTGGGTGAACGAGTTTTGGCCTTGCAACAACTTGTTTCACCATACGGAAAGACAGATACGGCATCTGTTCTTCTGGAGGCAATGGAATATATCCAGTTCCTTCATAAGCAAGTCAAGGTGTTGAGTGCTCCATATCTTCAAAGCACACCCACTGTTCAGCTGCAGGAGCAGGAGAAATGCAGCCACAGGCTGAGGAGCAAAGGTTTATGTCTCGTTCCAATCTCGTGTATTGCCGGAGTTGCAAGCAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAATTTCCCCCAAATTCGAGAACGCGATCTCGCCATTCGATTGA 504 46.23 MIASSLCNASAKFPAEVMEVETMMEHKRSLCSVDESSLTSLTSKRHKTGFSISSKERKDKLGERVLALQQLVSPYGKTDTASVLLEAMEYIQFLHKQVKVLSAPYLQSTPTVQLQEQEKCSHRLRSKGLCLVPISCIAGVASSNGADIWAPVKTISPKFENAISPFD 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11917002 11921469 + CmoCh14G014740.1 Cmo14g01474 396740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01474 167 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 17 151 - -
Cmo14g01474 167 CDD bHLH_AtbHLH_like 51 102 IPR045239 -
Cmo14g01474 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 110 IPR036638 GO:0046983
Cmo14g01474 167 Gene3D - 42 126 IPR036638 GO:0046983
Cmo14g01474 167 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983
Cmo14g01474 167 PANTHER TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 17 151 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01675 Cmo14g01474 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01474 Cmo-Chr14:11917002 Cmo16g00923 Cmo-Chr16:5660098 5.30E-30 dispersed
Cmo14g01474 Cmo-Chr14:11917002 Cmo06g01675 Cmo-Chr6:11584546 4.89E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01474 - - csv:101218499 294.278