Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01510 ATGCCGAAGAACAAGGGAAAGGGAGGAAAGAACAGGAAGAGAGGAAAGAACGAAGCAGATGATGAGAAGCGTGAGCTTGTTTTCAAGGAAGATGGTCAGGAGTATGCTCAGGTTCTCAGAATGTTAGGGAATGGTCGGTGTGAGGCGATGTGCATCGATGGAACAAAGCGTCTTTGCCATATCCGAGGGAAGATGCACAAAAAGGTTTGGATCGCAGCTGGTGATATAATACTTGTGGGTCTTCGCGACTACCAGGATGACAAAGCTGATGTCATCCTCAAGTATATGCCCGACGAAGCAAGGCTTTTGAAGGCATATGGTGAACTTCCTGAGAGCACACGTCTCAACGAGGGTATTGCTGGTGGTATCGATGATGAGGATGATGGTGGGGCCGATGACTATCTCGAGTTCGAGGACGAAGATATCGATAAGATATAG 438 47.72 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGIDDEDDGGADDYLEFEDEDIDKI 145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12111999 12112436 + CmoCh14G015100.1 Cmo14g01510 396776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01510 145 SUPERFAMILY Nucleic acid-binding proteins 2 144 IPR012340 -
Cmo14g01510 145 Gene3D - 2 145 IPR012340 -
Cmo14g01510 145 MobiDBLite consensus disorder prediction 1 25 - -
Cmo14g01510 145 CDD S1_IF1A 33 109 IPR001253 GO:0003743|GO:0006413
Cmo14g01510 145 TIGRFAM eIF-1A: translation initiation factor eIF-1A 14 110 IPR001253 GO:0003743|GO:0006413
Cmo14g01510 145 PANTHER EIF-1A 1 145 IPR001253 GO:0003743|GO:0006413
Cmo14g01510 145 Pfam Translation initiation factor 1A / IF-1 32 93 IPR006196 GO:0003723|GO:0003743|GO:0006413
Cmo14g01510 145 ProSitePatterns Eukaryotic initiation factor 1A signature. 41 63 IPR018104 GO:0003743|GO:0006413
Cmo14g01510 145 SMART eIF1neu4 28 110 IPR001253 GO:0003743|GO:0006413
Cmo14g01510 145 Hamap Translation initiation factor 1A [eif1a]. 16 110 IPR001253 GO:0003743|GO:0006413
Cmo14g01510 145 ProSiteProfiles S1 domain IF1 type profile. 22 96 IPR006196 GO:0003723|GO:0003743|GO:0006413
Cmo14g01510 145 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1A-LIKE 1 145 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01510 Cmo-Chr14:12111999 Cmo20g00664 Cmo-Chr20:3242551 8.57E-101 dispersed
Cmo14g01510 Cmo-Chr14:12111999 Cmo06g01652 Cmo-Chr6:11464500 2.47E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01510 K03236 - ini:109155805 265.388