Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01512 ATGTTTGGCTGGAGAGGTGGATTGTTTGTAGAACTGGTTGTTTTTGCAGATATGTGTTTTTTAGTGTCTGGTTTAGGTTCAATGTCTCCTGTTGCTGTGTCTTATGGCGAGAAAGGGCCTGTTTTCTGTGGTTTAAAGTCAGATGGGTCTAGTCTTGTGAGCTGTTTTGGTTCAAATTCAGCCATAACTTATGGAACCCCTTCTCATTTCCCATTCATTGGTCTTACTGCTGGCGATGGGTTTGTTTGTGGGCTTCTTTTGGATTCAAACCAACCTTATTGTTGGGGAAGTAGTGGCTATGTTCAAATGGGTGTTCCTCAGCCTATGAGCAAAGGAGCTCAATATCAAGAAATCAGTGCTGGTGATTATCATCTCTGTGGACTTCGAATGCCTTTGACTGGAAGGCGTAGGAACATGTCTTTTGTGGATTGTTGGGGATATAACATGACCAGAACCTTTGAGTTTGATGGCCCTATCGAGTCGATCTCGGCGGGGTCTGAGTTCAATTGTGGACTGTTTTCTCTTAATAGAACTGTTTTCTGTTGGGGTGATGAGACAAGCAGCCGGGTGATCAGTTTGATACCTAAAGATATGAGGTTTCAAAAGATTGCCTCTGGTGGATATCATGTTTGCGGGATTCTAGAGGGCGTGAGGTCGAGAGCGTTCTGTTGGGGAAGGAGCTTAGACATTGAAGAGGAGATTTCGGTAGCATATTCGGGTGAAGGAAATGTAGACTTGGTTCCTGTTGATCCATTAGCTTCTGTTGTTGGGGGCAAGTTCCATGCCTGTGGGATCAAAAGCTCGGACCGCGGTGTGATTTGTTGGGGCTTTACGGTCAAACCGAGTACTCCGGCACCGGATGGGATTAAAGTTTACGACATTGCAGCTGGAGATTACTTCACCTGTGGAATTCTAGCTGAAAAATCTCTCCTGCCTGTCTGCTGGGGGCTTGGATTTCCTACTTCTCTACCTTTAGCTGTTTCTCCTGGAATCTGTAAAGCAACTCCTTGTGCTCCGGGTTTCTACGAAATAAGCCAAGACAAAGCTCGGTGTAAGTCGCCGAGTTTTCATGTTTGTATGCCCTGCAGTACTGCTTGCCCTCCTGGGATGTACCAAAAATTTGAGTGTTCCTTAAAATCTGATAGGCAGTGTGAGTATAATTGTTCAAGTTGCTTTTCTGGTGAATGCATATCAAACTGTTCATCCATGATATCAAATGGTTTGTTGGTGAAGAAAAATGGTAAGCTCTGGTCTATGCAGCTGCCAGTTCTTGTAGCTGAGATTGCTTTTGCTGTGTTTTTGATAGCTATTGTGTCGATAACTGCAATCTTTTATGTTCGATACAAGCTACGGAACTGCCATTGCTCGGGAAAGGAGTTGAAGTCAAAGAAGAACAAAGTGACAGTCTCTGCCTTCCAGAAGGAAAGCTATAAAATACGTCCGGACTTAGATGAGCTGAAGATAAGGCGGGCTCAGATGTTCACCTATGAAGAACTCGAGAGAGCAACGTGTGGGTTTAAGGAAGAGTCTATTGTGGGAAAGGGGAGTTTCTCTTGTGTTTTTCGAGGTGTTTTGAAGGACGGGACGGTCGTAGCAGTCAAACGAGCTATAATGTCTCCTAATATGCAGAAGAATTCAAAAGAGTTCCACACTGAACTTGACTTGCTATCAAGATTAAACCATGCCCATTTGCTTAATCTGCTTGGTTATTGTGAAGAAGGTGGAGAGAGGCTTCTGGTTTATGAGTTCATGGCTCATGGCTCCTTGTATCAGCACCTTCATGGCAAGAACGAGACCTTAAAAGAGCAATTAGATTGGATAAGAAGAGTTACAATTGCAGTTCAAGCAGCCAGGGGAATCGAATACTTGCATGGCTATGCTTGTCCTCCCGTCATTCATCGAGACATTAAGTCGTCAAACATTCTCATCGACGAAGAGCACAATGCTCGAGTTGCTGATTTTGGCTTGTCATTGTTGGGACCAACAGATAGTAGCTCTCCATTAGCTGAGCTACCAGCTGGGACACTTGGCTATCTTGATCCCGAATACTATAGACTTCATTACCTTACCACAAAGTCCGATGTGTATAGCTTCGGTGTTTTGCTACTAGAAATTCTCAGTGGTCGAAAAGCCATTGATATGCAATATGAAGAAGGTAACATAGTAGAATGGGCAGTGCCTTTGATAAGATCTGGAGATATCTCTGCAATTTTAGATCCGATATTAAAACCGCCCTCCGATATCGAAGCCTTGAAGAGGATTGCAAATGTAGCTTGCAAATGTGTGAGAATGAGAGCTAAGGAGAGGCCATCAATGGACAAAGTGACAACTGCATTAGAGCGTGCTCTCGCCCAACTGATGGGAAGTCCGTGTAACGAACAACCGATCTTACCAACCGAGGTGGTTTTAGGAAGCAGCAGACTACACAAAAAGTCATCTCAAAGATCATCGAACCGTTCAGTGTCCGAAACGGATATAGCAGAAGCTGAGGATCAAAGGTTCGAGTTCAGAGCTCCGTCGTGGATTACATTCCCAAGCGTGACATCGTCCCAGAGGAGGAAATCCTCAGTGTCAGAAGCAGATGTTGATGGAAAGAATTTGGAAGGAAGAAATGTAGGGAATTGTGGAGGTGTTGGGGATGGATTGAAGAGTTTAGAGGAAGAGATTGGGCCTGCTTCCCCTCAGGAAAAGCTGTTTTTGGAGCACAATTTCTAA 2715 44.38 MFGWRGGLFVELVVFADMCFLVSGLGSMSPVAVSYGEKGPVFCGLKSDGSSLVSCFGSNSAITYGTPSHFPFIGLTAGDGFVCGLLLDSNQPYCWGSSGYVQMGVPQPMSKGAQYQEISAGDYHLCGLRMPLTGRRRNMSFVDCWGYNMTRTFEFDGPIESISAGSEFNCGLFSLNRTVFCWGDETSSRVISLIPKDMRFQKIASGGYHVCGILEGVRSRAFCWGRSLDIEEEISVAYSGEGNVDLVPVDPLASVVGGKFHACGIKSSDRGVICWGFTVKPSTPAPDGIKVYDIAAGDYFTCGILAEKSLLPVCWGLGFPTSLPLAVSPGICKATPCAPGFYEISQDKARCKSPSFHVCMPCSTACPPGMYQKFECSLKSDRQCEYNCSSCFSGECISNCSSMISNGLLVKKNGKLWSMQLPVLVAEIAFAVFLIAIVSITAIFYVRYKLRNCHCSGKELKSKKNKVTVSAFQKESYKIRPDLDELKIRRAQMFTYEELERATCGFKEESIVGKGSFSCVFRGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLYQHLHGKNETLKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPTDSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIRSGDISAILDPILKPPSDIEALKRIANVACKCVRMRAKERPSMDKVTTALERALAQLMGSPCNEQPILPTEVVLGSSRLHKKSSQRSSNRSVSETDIAEAEDQRFEFRAPSWITFPSVTSSQRRKSSVSEADVDGKNLEGRNVGNCGGVGDGLKSLEEEIGPASPQEKLFLEHNF 904
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12125350 12128064 - CmoCh14G015120.1 Cmo14g01512 396778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01512 904 Pfam Protein tyrosine and serine/threonine kinase 509 778 IPR001245 GO:0004672|GO:0006468
Cmo14g01512 904 SUPERFAMILY RCC1/BLIP-II 25 277 IPR009091 -
Cmo14g01512 904 MobiDBLite consensus disorder prediction 847 880 - -
Cmo14g01512 904 CDD STKc_IRAK 512 781 - -
Cmo14g01512 904 Gene3D - 233 323 IPR009091 -
Cmo14g01512 904 SUPERFAMILY Protein kinase-like (PK-like) 488 779 IPR011009 -
Cmo14g01512 904 PANTHER RECEPTOR-LIKE KINASE 8 904 - -
Cmo14g01512 904 MobiDBLite consensus disorder prediction 807 823 - -
Cmo14g01512 904 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 8 904 - -
Cmo14g01512 904 MobiDBLite consensus disorder prediction 807 826 - -
Cmo14g01512 904 Gene3D - 20 232 IPR009091 -
Cmo14g01512 904 SMART serkin_6 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01512 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Cmo14g01512 904 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 336 384 IPR001368 GO:0005515
Cmo14g01512 904 ProSiteProfiles Protein kinase domain profile. 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01512 904 Gene3D Transferase(Phosphotransferase) domain 1 584 791 - -
Cmo14g01512 904 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Cmo14g01512 904 Gene3D Phosphorylase Kinase; domain 1 478 583 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01649 Cmo14g01512 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00253 Cmo-Chr1:1149002 Cmo14g01512 Cmo-Chr14:12125350 7.68E-75 dispersed
Cmo03g01242 Cmo-Chr3:9573467 Cmo14g01512 Cmo-Chr14:12125350 6.14E-102 dispersed
Cmo04g00153 Cmo-Chr4:802226 Cmo14g01512 Cmo-Chr14:12125350 1.05E-16 dispersed
Cmo07g00975 Cmo-Chr7:4784736 Cmo14g01512 Cmo-Chr14:12125350 3.98E-106 dispersed
Cmo13g00053 Cmo-Chr13:316316 Cmo14g01512 Cmo-Chr14:12125350 7.52E-89 dispersed
Cmo14g01003 Cmo-Chr14:5407440 Cmo14g01512 Cmo-Chr14:12125350 6.83E-72 dispersed
Cmo03g01289 Cmo-Chr3:9752806 Cmo14g01512 Cmo-Chr14:12125350 2.44E-48 transposed
Cmo14g01512 Cmo-Chr14:12125350 Cmo06g01649 Cmo-Chr6:11458276 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74863 PF07714 PK_Tyr_Ser-Thr 1.60E-43 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01512 - - csv:101210393 1761.5