Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g01545 | ATGTCCAGTTCCAGTCATTCTCCGTCCGCCTTCGACAGACCTCGCTCCGTCATCAAGAAGATTCTTGCTAAACTCCAGAACGAAGGCGACGGCGCCGTCGTTCGTCGAGGCATCGGAAGGAATGATTTGAAGAATCTGGATCCATTTCTCATGCTCGATGATTTCTCTGGTAACCGAATCGCAATCCGATTTTTCTTCTTATTTCTCTATCTACGAATTGAATTTTTTCCAATTGTTTCATTCATTGCAGTCACTCCACCGGCTGGATTCCCCGATCATCCTCACAGAGGTTCGTTCCTTAAAATTGAATTTTCGTTCTTCAACAACGGAACTAGGTTAGAAGTAGCAGTACTCGTAAATTGTAAAATTATTCAGAGAAATGATGAACATGATATGCTGTATATATTTCATACTTTTTTGAGCGTTGCTGTTATAATGTTTTTTTCTTCAAATTCTGATGTCAAATTTCTTTTTCTTTCAGGTTTTGAGACAGTGACGTATATGTTACAAGGAGGGATTACCCATCAAGATTTTGCTGGCCACAAGGGTACAATTAGAACAGGGGATGTCCAGAAGTTCAATGACGCAATAAATAAATTAAATAACATATTGAGATTTGGTTTTGGGGCACAGTGGATGACAGCGGGACGAGGTATAGTCCATTCTGAAATGCCTGCTGGTGCAGGTTCTCAAAAGGGCTTGCAGCTTTGGATCAATCTTGCATCCCGTGACAAAATGATGAAGCCAAGGTATCAGGAGATCCCAAGCGACAACATTCCGAGAGCGGAGAAAGACGGTGTGGAAGTTCGTGTCATAGCAGGCGAGTCCATGGGAGTCCGTTCTCCAATCTACACTCAAACGCCAACTATGTACCTCGACTTCACTTTGAAACCAAGAGCTCAAGTGCATCAAAGCATCCCAGACACATGGACCTCTTTCGTGTACATAATCGACGGTGAAGGAGTGTTCGGGTCCCCGAACTCGTCCCCGGTGGCTGCTCACCATGTCCTAGTATTGGGAGGTGGAAATGGGGTAAGTGTGTGGAACAAATCTTCAAAGCCATTGAGGTTTGTTCTGATTGCAGGGAAGCCTCTGAATGAACCAATTGTTCAATATGGACCGTTTGTGATGAACTCGCAATCTGAAATTGCACAAGCAATTGAGGACTACCGCTATGCCAAAAATGGGTTTGAAATGGCGAAGTATTGGAGATCTCAGTGA | 1221 | 43.73 | MSSSSHSPSAFDRPRSVIKKILAKLQNEGDGAVVRRGIGRNDLKNLDPFLMLDDFSGNRIAIRFFFLFLYLRIEFFPIVSFIAVTPPAGFPDHPHRGSFLKIEFSFFNNGTRLEVAVLVNCKIIQRNDEHDMLYIFHTFLSVAVIMFFSSNSDVKFLFLSGFETVTYMLQGGITHQDFAGHKGTIRTGDVQKFNDAINKLNNILRFGFGAQWMTAGRGIVHSEMPAGAGSQKGLQLWINLASRDKMMKPRYQEIPSDNIPRAEKDGVEVRVIAGESMGVRSPIYTQTPTMYLDFTLKPRAQVHQSIPDTWTSFVYIIDGEGVFGSPNSSPVAAHHVLVLGGGNGVSVWNKSSKPLRFVLIAGKPLNEPIVQYGPFVMNSQSEIAQAIEDYRYAKNGFEMAKYWRSQ | 406 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 12339913 | 12341891 | + | CmoCh14G015450.1 | Cmo14g01545 | 396811 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g01545 | 406 | CDD | cupin_pirin_C | 288 | 364 | - | - | |
Cmo14g01545 | 406 | Gene3D | Jelly Rolls | 25 | 99 | IPR014710 | - | |
Cmo14g01545 | 406 | SUPERFAMILY | RmlC-like cupins | 15 | 97 | IPR011051 | - | |
Cmo14g01545 | 406 | SUPERFAMILY | RmlC-like cupins | 161 | 192 | IPR011051 | - | |
Cmo14g01545 | 406 | PANTHER | PIRIN-RELATED | 210 | 406 | IPR012093 | - | |
Cmo14g01545 | 406 | PANTHER | PIRIN-RELATED | 160 | 193 | IPR012093 | - | |
Cmo14g01545 | 406 | Pfam | Pirin C-terminal cupin domain | 291 | 396 | IPR008778 | - | |
Cmo14g01545 | 406 | PANTHER | PIRIN-LIKE PROTEIN | 210 | 406 | - | - | |
Cmo14g01545 | 406 | PANTHER | PIRIN-LIKE PROTEIN | 160 | 193 | - | - | |
Cmo14g01545 | 406 | PANTHER | PIRIN-LIKE PROTEIN | 5 | 56 | - | - | |
Cmo14g01545 | 406 | Pfam | Pirin | 210 | 238 | IPR003829 | - | |
Cmo14g01545 | 406 | Pfam | Pirin | 160 | 192 | IPR003829 | - | |
Cmo14g01545 | 406 | Gene3D | Jelly Rolls | 126 | 369 | IPR014710 | - | |
Cmo14g01545 | 406 | CDD | cupin_pirin_N | 32 | 240 | - | - | |
Cmo14g01545 | 406 | PANTHER | PIRIN-RELATED | 5 | 56 | IPR012093 | - | |
Cmo14g01545 | 406 | SUPERFAMILY | RmlC-like cupins | 209 | 404 | IPR011051 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo06g01619 | Cmo14g01545 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo09g00982 | Cmo-Chr9:5209836 | Cmo14g01545 | Cmo-Chr14:12339913 | 1.44E-14 | dispersed | |
Cmo14g01545 | Cmo-Chr14:12339913 | Cmo16g00975 | Cmo-Chr16:6636999 | 1.54E-16 | dispersed | |
Cmo14g01545 | Cmo-Chr14:12339913 | Cmo06g01619 | Cmo-Chr6:11308243 | 6.67E-31 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g01545 | K06911 | - | csv:101205861 | 409.068 |