Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01545 ATGTCCAGTTCCAGTCATTCTCCGTCCGCCTTCGACAGACCTCGCTCCGTCATCAAGAAGATTCTTGCTAAACTCCAGAACGAAGGCGACGGCGCCGTCGTTCGTCGAGGCATCGGAAGGAATGATTTGAAGAATCTGGATCCATTTCTCATGCTCGATGATTTCTCTGGTAACCGAATCGCAATCCGATTTTTCTTCTTATTTCTCTATCTACGAATTGAATTTTTTCCAATTGTTTCATTCATTGCAGTCACTCCACCGGCTGGATTCCCCGATCATCCTCACAGAGGTTCGTTCCTTAAAATTGAATTTTCGTTCTTCAACAACGGAACTAGGTTAGAAGTAGCAGTACTCGTAAATTGTAAAATTATTCAGAGAAATGATGAACATGATATGCTGTATATATTTCATACTTTTTTGAGCGTTGCTGTTATAATGTTTTTTTCTTCAAATTCTGATGTCAAATTTCTTTTTCTTTCAGGTTTTGAGACAGTGACGTATATGTTACAAGGAGGGATTACCCATCAAGATTTTGCTGGCCACAAGGGTACAATTAGAACAGGGGATGTCCAGAAGTTCAATGACGCAATAAATAAATTAAATAACATATTGAGATTTGGTTTTGGGGCACAGTGGATGACAGCGGGACGAGGTATAGTCCATTCTGAAATGCCTGCTGGTGCAGGTTCTCAAAAGGGCTTGCAGCTTTGGATCAATCTTGCATCCCGTGACAAAATGATGAAGCCAAGGTATCAGGAGATCCCAAGCGACAACATTCCGAGAGCGGAGAAAGACGGTGTGGAAGTTCGTGTCATAGCAGGCGAGTCCATGGGAGTCCGTTCTCCAATCTACACTCAAACGCCAACTATGTACCTCGACTTCACTTTGAAACCAAGAGCTCAAGTGCATCAAAGCATCCCAGACACATGGACCTCTTTCGTGTACATAATCGACGGTGAAGGAGTGTTCGGGTCCCCGAACTCGTCCCCGGTGGCTGCTCACCATGTCCTAGTATTGGGAGGTGGAAATGGGGTAAGTGTGTGGAACAAATCTTCAAAGCCATTGAGGTTTGTTCTGATTGCAGGGAAGCCTCTGAATGAACCAATTGTTCAATATGGACCGTTTGTGATGAACTCGCAATCTGAAATTGCACAAGCAATTGAGGACTACCGCTATGCCAAAAATGGGTTTGAAATGGCGAAGTATTGGAGATCTCAGTGA 1221 43.73 MSSSSHSPSAFDRPRSVIKKILAKLQNEGDGAVVRRGIGRNDLKNLDPFLMLDDFSGNRIAIRFFFLFLYLRIEFFPIVSFIAVTPPAGFPDHPHRGSFLKIEFSFFNNGTRLEVAVLVNCKIIQRNDEHDMLYIFHTFLSVAVIMFFSSNSDVKFLFLSGFETVTYMLQGGITHQDFAGHKGTIRTGDVQKFNDAINKLNNILRFGFGAQWMTAGRGIVHSEMPAGAGSQKGLQLWINLASRDKMMKPRYQEIPSDNIPRAEKDGVEVRVIAGESMGVRSPIYTQTPTMYLDFTLKPRAQVHQSIPDTWTSFVYIIDGEGVFGSPNSSPVAAHHVLVLGGGNGVSVWNKSSKPLRFVLIAGKPLNEPIVQYGPFVMNSQSEIAQAIEDYRYAKNGFEMAKYWRSQ 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12339913 12341891 + CmoCh14G015450.1 Cmo14g01545 396811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01545 406 CDD cupin_pirin_C 288 364 - -
Cmo14g01545 406 Gene3D Jelly Rolls 25 99 IPR014710 -
Cmo14g01545 406 SUPERFAMILY RmlC-like cupins 15 97 IPR011051 -
Cmo14g01545 406 SUPERFAMILY RmlC-like cupins 161 192 IPR011051 -
Cmo14g01545 406 PANTHER PIRIN-RELATED 210 406 IPR012093 -
Cmo14g01545 406 PANTHER PIRIN-RELATED 160 193 IPR012093 -
Cmo14g01545 406 Pfam Pirin C-terminal cupin domain 291 396 IPR008778 -
Cmo14g01545 406 PANTHER PIRIN-LIKE PROTEIN 210 406 - -
Cmo14g01545 406 PANTHER PIRIN-LIKE PROTEIN 160 193 - -
Cmo14g01545 406 PANTHER PIRIN-LIKE PROTEIN 5 56 - -
Cmo14g01545 406 Pfam Pirin 210 238 IPR003829 -
Cmo14g01545 406 Pfam Pirin 160 192 IPR003829 -
Cmo14g01545 406 Gene3D Jelly Rolls 126 369 IPR014710 -
Cmo14g01545 406 CDD cupin_pirin_N 32 240 - -
Cmo14g01545 406 PANTHER PIRIN-RELATED 5 56 IPR012093 -
Cmo14g01545 406 SUPERFAMILY RmlC-like cupins 209 404 IPR011051 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01619 Cmo14g01545 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00982 Cmo-Chr9:5209836 Cmo14g01545 Cmo-Chr14:12339913 1.44E-14 dispersed
Cmo14g01545 Cmo-Chr14:12339913 Cmo16g00975 Cmo-Chr16:6636999 1.54E-16 dispersed
Cmo14g01545 Cmo-Chr14:12339913 Cmo06g01619 Cmo-Chr6:11308243 6.67E-31 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01545 K06911 - csv:101205861 409.068