Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01590 ATGAGAGTTGGTAAGTATGAGTTGGGGAAGACTCTCGGAGAAGGCAATTTCGGCAAGGTGAAGTTGGCCGCCGATATCCGTACCGGTCGCCGTTACGCAGTCAAGATCCTCGACAAGACTAGGATTCTCCGTCTCAACTTCTCCGACCAGATTAAGCGTGAAATAAGTACTCTCAAGCTCCTCAGGCATCCGAATGTTGTAAGACTTTATGAGGTTTTAGCTAGTAAGACGAAGATTTATATGGTTCTGGAGTGCGCCTCTGGTGGAGAATTGTTTGATAGAATTGAATCCAAAGGTAAGATGAATGAAGCGGAAGGTCGAAGGCTCTTCCAGCAGCTTATTGATGGTCTCAGCTACTGCCATGAAAAAGGAGTTTACCACAGGGATCTCAAGCTGGAAAACGTGCTTGTTGATGATAAGGGAAACATTAAGATTTCTGATTTTGGCCTCAGTGCTTTACCACAGAATTGCAGGGAAGATGGTTTGCTGCACACTACCTGTGGAAGTCCCAACTATGTTGCACCAGAGGTTCTTGCTAACAGAGGATACAATGGAGCCGCCTCTGATATATGGTCATGTGGGGTTATTTTGTATGTCATTCTTACGGGCTGTCTTCCATTCGACGAGACCAATCTATCTTTACTTTATAAAAAGACTTTGAGGGGGGATTTTCAGATACCCAAATGGTTATCGGCAGGTGCCAGAAAGTTGATAGGGAGAACTCTTGACCCCAATCCAAACACACGCATTACAATAGCAGGAATTAAAGAGAATGAGTGGTTCAAGACCGACTATAATCCTGCTTCTCCTGGTTATGACGATGAGGAGGAGGGTCCACTTGATGATCAGGATGATGCCATCTCAACGCCTGATGAGCCATCCGACGTCGAAAACAGCCCAAAATCTCCATCTATTATCAATGCGTTTGAGTTAATTGGGATGTCTTCAAGTCTGGATCTGTCTGGTTTCTTTGAGCAAGAGGATGTTTCCGAGAGGAAGATCAGATTTACATCCAACCATTCGGCCAAGGACTTGCTAGAGAGAATCGAAATTATCGCAACGGATATGGGATTTCGAGTCCAAAAGAAAAGTGGAAAGTTGAAAGTGATGCAAGAGGTAAGATGCCAAAGAAGCCTAAGTAATCTATCATTTGTGGCAGAGGTCTTTGAGATAAGCCCGTTTCTTCATGTAGTTGAACTGAAAAAATCTTTTGGAGATTCATCAGCTTATAGACAGTTGTGTGAAAGGCTATCAAATGATTTGGGCACAAACCCAGAGCTCGAACGGCATAATTCAAGCTCCTTAGCAGTAAACAGTACATGTTAG 1326 43.82 MRVGKYELGKTLGEGNFGKVKLAADIRTGRRYAVKILDKTRILRLNFSDQIKREISTLKLLRHPNVVRLYEVLASKTKIYMVLECASGGELFDRIESKGKMNEAEGRRLFQQLIDGLSYCHEKGVYHRDLKLENVLVDDKGNIKISDFGLSALPQNCREDGLLHTTCGSPNYVAPEVLANRGYNGAASDIWSCGVILYVILTGCLPFDETNLSLLYKKTLRGDFQIPKWLSAGARKLIGRTLDPNPNTRITIAGIKENEWFKTDYNPASPGYDDEEEGPLDDQDDAISTPDEPSDVENSPKSPSIINAFELIGMSSSLDLSGFFEQEDVSERKIRFTSNHSAKDLLERIEIIATDMGFRVQKKSGKLKVMQEVRCQRSLSNLSFVAEVFEISPFLHVVELKKSFGDSSAYRQLCERLSNDLGTNPELERHNSSSLAVNSTC 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 12623954 12626952 - CmoCh14G015900.1 Cmo14g01590 396856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01590 441 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Cmo14g01590 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Cmo14g01590 441 CDD CIPK_C 307 418 - -
Cmo14g01590 441 MobiDBLite consensus disorder prediction 270 291 - -
Cmo14g01590 441 Gene3D Kinase associated domain 1, KA1 306 423 - -
Cmo14g01590 441 PANTHER CBL-INTERACTING PROTEIN KINASE 21 1 427 - -
Cmo14g01590 441 PANTHER - 1 427 - -
Cmo14g01590 441 Gene3D Transferase(Phosphotransferase) domain 1 2 305 - -
Cmo14g01590 441 ProSiteProfiles Protein kinase domain profile. 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01590 441 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Cmo14g01590 441 Pfam NAF domain 303 362 IPR004041 GO:0007165
Cmo14g01590 441 Pfam Protein kinase domain 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01590 441 SUPERFAMILY Protein kinase-like (PK-like) 3 262 IPR011009 -
Cmo14g01590 441 SMART serkin_6 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01590 441 MobiDBLite consensus disorder prediction 266 301 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01590 Cmo-Chr14:12623954 Cmo02g01223 Cmo-Chr2:7357307 5.76E-157 dispersed
Cmo14g01590 Cmo-Chr14:12623954 Cmo17g00389 Cmo-Chr17:2420324 0 wgd
Cmo14g01590 Cmo-Chr14:12623954 Cmo06g01587 Cmo-Chr6:11133172 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74866 PF00069 Pkinase 5.50E-72 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01590 K07198 - csv:101205987 808.52