Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g01648 | ATGTCAAATGATGACGATGGAGGGAAGAACAAGAAGGCCGCCCTTATCGGCGTGTCTTCATTGTTTCTCGTTGCCATGGTAGTTGCGGTGGCCGTCGGTGTCAACCGGAATGACCCTGATGAAATTAGTAGCACCAGTGGTGACGGAGGCACGACGGAGATCTCCACCTCCGTCAAAGCGATTAAAGCCCTTTGTCAACCCACTGACTACCAAGAAACTTGCATAGAATCGCTCTCGGGAGTCAACACGAGCGACCCACGTGAGCTAATCAAGGTTGGATTCCAATCTACCATCAATGAACTCAAATCTGCCATTGTAAAATCCGCCACCCTAAAAGAATTCGCCTCCGATCCCAAGGCCAAACCAGCACTCGACGTTTGTAACGAGGTTGTGGAGTACGCAATTGACGATCTCATAATGTCGTTTGATAGAATCACTGACAATTTCAATATCAACAAAATTACTGATTACGTCGAGGATCTTAAGGTTTGGCTTAGTGCCACGTTGACATTGCAAGACACTTGCGTGGATGCATTCGATAATGTTACCGGCGATACAGGTGACAAAATGAGGCAATTATTGAAGACGTCGAAGGAAATGACCGCCAATGGACTTGGAATGGTGAGTGAGGTTACTTCCATTATGTCCTCTTTTGGGATGCGGTTGGCTGGACGACGATTGTTGGAGGAGGAATCTAATAAAGAGGAGGAAGAACCATCGTGGATCAACGACCGGCGCGGGCTACTCCAAGCCACTCCGAAAACCATCCAGCCCAATGTTGTGGTAGCTAAAGACGGAAGTGGGAAGTACAAGACGGTGAATGAAGCATTATTTGATATCCCGAAAAAAAGCAATAAAACATTTGTGATTTATGTGAAGGAAGGAGTTTATGAAGAGCAGGTGATGATGAACAAAAGTATGACGTGGGTGATGATGATTGGAGACGGCCCGAATAAGACCAAGATTACCTCCAACAAGAACTTCGCCGATGGAACACCCACATTCAAAACCGCTACCGTTGCGGTGGTTGGAACCAACTTCATTGCCAAGGACATGTGGTTCGAGAACTCGGCTGGACCAGAAAAACATCAAGCAGTGGCACTCCGAGTTCAATCCGACATGTCAATCTTTTACAATTGTCAAATGGACGGTTACCAAGATACACTCTACACTCACACCCATCGTCAATTCTATCGAGACTGCACCATCACTGGAACCATCGACTTCATCTTCGGTAATGCGGCCGTCGTCTTCCAAAACTGTAAAATTTTCGTGAGAAAACCATTGCCGAATCAACAATGCATCGTCACCGCTCAAGGCCGAAGCCAACGGAAGGAGCCCACCGCCATAATCTTACAGAACTGTCTCATCTCCTCCGCCCCCGACTACTTCCCTGTCCGCCACACCTACAAGGCTTACCTTGGCCGCCCATGGAAGCAATACTCAAGAACCATCATTTTGCAATGCAAAATCGACGACTTGATCCAGCCTGAAGGGTGGCTTCCATGGACGGGCGATTTTGCTCTCAATACATTGTTTTACTCCGAGTACAATTGCAGGGGAGCTGGCTCAAAGAAGGACAATCGGGTCAAGTGGAGGGGAATTAAGGAGATTACTCCCGAGCACGCCATCGATTTCACCGCTGGGTTATTTATTCGAGGTAATCCATGGATTAAGCCCACTGGAGTTCCGTACAGTTCCGGCATGATGACATTGTCAGAACAAAAATTGACCATCCCTAGGGCTCCATTTGAAGTTAAAGCACCAACGTATCGAAGGCGGATTTCAAATTTTAATTTCAAGATGACTAGTAAAACCGGCGGTACTGGAGAGGCTGCTTTCCACATGCTGCAGCCGGAGCGTGACCTTCGGTTGAATTGGGAAGTCGACCTCGCTGAGAAGCTTGAAAGTTATTTGTTGCAGATTTGCACCGGTGAGTTTCAGTCCGGCGAAGATGAGAACCACAATTCTGTCAATTTTGCTGAAGGTGAGGCTGCTCTGCTTCTTCAAGGTTCGATTCAGGTGTACAGTCGGAAGGTTGAATACCTCTACTCATTGGTTCTGCGAGCTTTGGAGTTCCTCTCCGAAAAGAGCTTGGTTGAAGCCCATTCAACTGAGGCAAATTATTGCCTGGGATCGCAGCAGGATCATTTGGAAGGGACCTCAATCGAGGCTGAACAAGATGGTTCTAATGAAATTGCTGAAGATGAAAACGACCTATTTTGGGTTTCAGAGGATGTGCCAGTTGACACGAAGAATACTTTGGAGAGTACCAAAGAAGATGCTTGGTTAAATCAAACTGTAAAGCCTCCAGAAAATTTAGTCGTTCTTGAAGGTGATTGCTTGGATGCATCTGGTGACAATGGTGAACTAGATTCATACTTGTTGGCCTCCACTAGTGATATTTTCCAAGACTTCGTTCTCTTAGATTCATGTGATGCTGAGGCAGTTCAAGATTTTTTGAATGGTGGTAATAAGTTTGGCCAAAGCCATAATGGTGGATTCAGAGGCAGCTCAACCCACAGGGGTTTTCAGTCTCCCTCTAGACGTTCTGGTGGAAGTATGCAGAAATCATCAGTAGGAAAGACTCAGGGTGCTAATGTTGCTCGGACACCGTTTTCCAATCATTGCTTCGTGTCTGATCCTCCATCTTGTGATAATTTTGCCAATGAAAATCATGAATTTGACATGGATGCTGGGAATCCAGAACCAGATGACTCAAATGGTTCTGAAGACGATTATGATCCTTGGAAGCCTTTGAATCCTCATGAGCCAGGAAATTTAAAAATAAAACCATTTAGAAAAGTAAAAGCTTTTAAAAAGAATTATGTCAATTCTGGTAAGCATGAGTCTGTAGCTGCTTTGTTTCCACTAGCTAAATTACAAGGCCCAGTTAGCCCAGAGTTCGCGAAGCTTTGGGAAGAGCAGCACCAAGCCTTTGAAACGCATAGCGACTCCAATTCTGCTTTATTATATGAAAAGCTGCGAAATTCACTTATCAATGAAGATAGAAGTTGTGATTCCCCTTATGATGTGGAAGATGACAATATTGATTATGGTTTCGAAGATGTAATGCCTGATATCAATCCGCCAGATATGGATGATCCCTGTAATCATTATATGGACGAGTCTACGTGGTTAGGGAGTGAAAAGCATGATGCGGCTGCCCATTTTGATAAAGGTGAAACATATGAACCTGAATTTCCCTATTCGCAGTCAAGTCAAGAACATTTTTGTCCTTCTCATCTTGACACACTCCTTGCAAGCATTGCTGAGAATCCTACTGAAATGGCCACTCGAGTCTCTACGTGGAAACAGAATATTGAACACAATTTGGAAGAGCAAGACAAACGCCTTCCATTTGATATTCATGAATATTGCAAAGCGATTCGTGAAAAATTATCTGGTGAAGCTGACAAAGGCGGTGTAATTTCTTTCTCTGATGTTGTTGAAGGGCAGGAGAAGTACGTTGTATCACGAAGTTTTACTGCTGTTCTTCAATTGGTGAACAATGAAGATGTGGAGCTTGAAGAGGACGAGGTTGATGGGGAGTCGATTGTCTATACTTCTGCGAACCCGTTCCATGTTCGGCTTATTCGCCAAGACAAATGGGCGGATGAAACTCGGCATCAAACCTCAAGAAAGAGGTCCACATCTCCAGATAAGGTTGAAAATGGTAGGGATGACATTGTTAGGAATATAAACCACAAATCATCACACATGGGTAAAACTCTTGAGAAATCTAGGGTGATGAGAGAATTGTCACGACAGAATTGCAAACTTCCTGTGAAACTGGGGAAGGTTGGTGGCATAAAATGCACTCCTGAAGGCAAGAGGCCAGTTGACTGA | 3849 | 44.84 | MSNDDDGGKNKKAALIGVSSLFLVAMVVAVAVGVNRNDPDEISSTSGDGGTTEISTSVKAIKALCQPTDYQETCIESLSGVNTSDPRELIKVGFQSTINELKSAIVKSATLKEFASDPKAKPALDVCNEVVEYAIDDLIMSFDRITDNFNINKITDYVEDLKVWLSATLTLQDTCVDAFDNVTGDTGDKMRQLLKTSKEMTANGLGMVSEVTSIMSSFGMRLAGRRLLEEESNKEEEEPSWINDRRGLLQATPKTIQPNVVVAKDGSGKYKTVNEALFDIPKKSNKTFVIYVKEGVYEEQVMMNKSMTWVMMIGDGPNKTKITSNKNFADGTPTFKTATVAVVGTNFIAKDMWFENSAGPEKHQAVALRVQSDMSIFYNCQMDGYQDTLYTHTHRQFYRDCTITGTIDFIFGNAAVVFQNCKIFVRKPLPNQQCIVTAQGRSQRKEPTAIILQNCLISSAPDYFPVRHTYKAYLGRPWKQYSRTIILQCKIDDLIQPEGWLPWTGDFALNTLFYSEYNCRGAGSKKDNRVKWRGIKEITPEHAIDFTAGLFIRGNPWIKPTGVPYSSGMMTLSEQKLTIPRAPFEVKAPTYRRRISNFNFKMTSKTGGTGEAAFHMLQPERDLRLNWEVDLAEKLESYLLQICTGEFQSGEDENHNSVNFAEGEAALLLQGSIQVYSRKVEYLYSLVLRALEFLSEKSLVEAHSTEANYCLGSQQDHLEGTSIEAEQDGSNEIAEDENDLFWVSEDVPVDTKNTLESTKEDAWLNQTVKPPENLVVLEGDCLDASGDNGELDSYLLASTSDIFQDFVLLDSCDAEAVQDFLNGGNKFGQSHNGGFRGSSTHRGFQSPSRRSGGSMQKSSVGKTQGANVARTPFSNHCFVSDPPSCDNFANENHEFDMDAGNPEPDDSNGSEDDYDPWKPLNPHEPGNLKIKPFRKVKAFKKNYVNSGKHESVAALFPLAKLQGPVSPEFAKLWEEQHQAFETHSDSNSALLYEKLRNSLINEDRSCDSPYDVEDDNIDYGFEDVMPDINPPDMDDPCNHYMDESTWLGSEKHDAAAHFDKGETYEPEFPYSQSSQEHFCPSHLDTLLASIAENPTEMATRVSTWKQNIEHNLEEQDKRLPFDIHEYCKAIREKLSGEADKGGVISFSDVVEGQEKYVVSRSFTAVLQLVNNEDVELEEDEVDGESIVYTSANPFHVRLIRQDKWADETRHQTSRKRSTSPDKVENGRDDIVRNINHKSSHMGKTLEKSRVMRELSRQNCKLPVKLGKVGGIKCTPEGKRPVD | 1282 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 13035160 | 13041555 | + | CmoCh14G016480.1 | Cmo14g01648 | 396914 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g01648 | 1282 | CDD | PMEI-like_3 | 63 | 213 | - | - | |
Cmo14g01648 | 1282 | MobiDBLite | consensus disorder prediction | 825 | 866 | - | - | |
Cmo14g01648 | 1282 | Pfam | Condensin II complex subunit CAP-H2 or CNDH2, N-terminal | 614 | 706 | IPR009378 | - | |
Cmo14g01648 | 1282 | PANTHER | PECTINESTERASE | 14 | 603 | - | - | |
Cmo14g01648 | 1282 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 59 | 211 | IPR035513 | - | |
Cmo14g01648 | 1282 | Pfam | Condensin II complex subunit CAP-H2 or CNDH2, mid domain | 769 | 913 | IPR031719 | - | |
Cmo14g01648 | 1282 | Gene3D | - | 253 | 569 | IPR012334 | - | |
Cmo14g01648 | 1282 | MobiDBLite | consensus disorder prediction | 889 | 926 | - | - | |
Cmo14g01648 | 1282 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 56 | 211 | IPR035513 | - | |
Cmo14g01648 | 1282 | SMART | PMEI_2 | 56 | 207 | IPR006501 | GO:0004857 | |
Cmo14g01648 | 1282 | Pfam | Pectinesterase | 259 | 555 | IPR000070 | GO:0030599|GO:0042545 | |
Cmo14g01648 | 1282 | MobiDBLite | consensus disorder prediction | 1206 | 1228 | - | - | |
Cmo14g01648 | 1282 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 57 | 208 | IPR006501 | GO:0004857 | |
Cmo14g01648 | 1282 | Pfam | Plant invertase/pectin methylesterase inhibitor | 60 | 205 | IPR006501 | GO:0004857 | |
Cmo14g01648 | 1282 | ProSitePatterns | Pectinesterase signature 2. | 403 | 412 | IPR033131 | - | |
Cmo14g01648 | 1282 | PANTHER | PECTINESTERASE | 14 | 603 | - | - | |
Cmo14g01648 | 1282 | SUPERFAMILY | Pectin lyase-like | 256 | 568 | IPR011050 | - | |
Cmo14g01648 | 1282 | Pfam | Condensin II complex subunit CAP-H2 or CNDH2, C-term | 916 | 1204 | IPR031737 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo14g01648 | Cmo17g00328 | CCT | |
Cmo08g01213 | Cmo14g01648 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo14g01648 | Cmo-Chr14:13035160 | Cmo06g01513 | Cmo-Chr6:10795720 | 0 | dispersed | |
Cmo14g01648 | Cmo-Chr14:13035160 | Cmo17g00328 | Cmo-Chr17:1985349 | 0 | wgd | |
Cmo14g01648 | Cmo-Chr14:13035160 | Cmo06g01512 | Cmo-Chr6:10790587 | 0 | wgd | |
Cmo14g01648 | Cmo-Chr14:13035160 | Cmo08g01213 | Cmo-Chr8:7701057 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g01648 | K01051 | - | csv:101212686 | 866.3 |