Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01659 ATGCCTCGGACCAAATCATATTCTCCATTTTTGTCTTTGCTTCCACTCTCATACAGATGCATATTTCGTCTATCTTCACTTCTTCTTCTTTTCATTGCTCTTGATCTTCATCTGCTTCGATTCCCTCCTCTTCGTCATATACTATGCTTCACGAAGCTTCAACAAAACATGAGGGAGAACTTGAAGTTAGCTTTGCCTGGACTTCAAAGGATCAGCAGTTTCTCTTGCTTATCTGGGGCTGCCTTGAGTGCAAATGCTACCCTAGCAAACACAAATATATGCAATGGGTTAATAGGAGAAGAAATTCTTCCGACCTGGGACTCTCCTAACTCCTTCCGTAAGGTTCCCTCATCACCTACTCTTTCAAGGTTGGATATATTGTCCACGTCGATGCAGAGTAGTCTGTCAAACTTAAGCTGCAGTCCATCTACCCCAACATCTGAATATGATTCATACTTATCGAAATCCATGAGTGCCCCTTCCGGAAGTGAAGGTTTTCTTAATGTTAAGGAAGTGCAAGTGGCAGGTGGAGCTGCCGGTGAGGACAGGGTCCAAGCTGTTTGTTCTGAAGAAAATGGATGGCTATTTTGTGGAATTTATGATGGTTTTAATGGAAGAGATGCAGCTGATTTTCTTGCTGGCACATTGTATGAGACCATCGTATTTTATTTTAACCTACTAGATTGGGAAGCTAAGAATGAAGCCTCCGACGGTTTGGACATGGATAATTCACATCCTCTGGATGATGGTAGCATTACTCATGAAAGATTTTCTCCTTTGAAAAACAATAGTAAAAATGCTTCAGATATCCACAGTGTATTCGAGAACCATTCATATGCCAAAGCAGGAATGACAAACTATCCTCTGAGGCATGGGGTGCTTGATAGCCTCCAGCGTGCTCTTAGTCAAGCAGAGAATGATTTTCTGCACATGGTTGAACAGGAAATGGAGGATCGTCCTGATTTAGTCTCTGTTGGATCATGTGTTTTAGTTGTTCTTCTTCATGGAAAGGATTTATACACGCTAAATTTGGGTGATAGTAGAGCAGTACTAGCTACCCTTGACGTGAGAGGAAATGGGGGACTGAAAGCTGTCCAGCTCACTGAGAGTCACACTGTGGATAATGAACTTGAGAGAGCACGGCTACATCATGATCATCCTGATGATCCGACAATCATTGTTGGTGGGAAAGTTAAAGGAAAACTAAAGGTGACTCGTGCTTTTGGAGTTGGCTACTTGAAGTCGAAAAAGTTTAATGATGCTTTGATGGGTATTCTTCGAGTTCCTAGCCTAATAAGCCCTCCCTATGTTTCCACTCAACCGGCATTGTCTATCCATAGGATATCAAAATCAGATTGCTTTGTTATAGTTGGAAGTGATGGTTTGTTTGACTTTTTTGGCAATGAGGAAGCAGTGAACCTTGTCCGTTCATATATCTTGAGCAACCCTACTGGTGATCCTGCAAAATTTTTACTGGAGCAGCTCCTATTGAAAGCAGCTGATTGCGCAGGTTTTAGCAAGGAAGAATTAATTACCATTCCAGCCGGCAGGAGAAGGAAATATCATGATGATGTAACTGTTATTGTAATCATCCTTGGAACAAATCAGCGCACCACAAGGGCATCTACTAGCATGTAA 1638 42.0 MPRTKSYSPFLSLLPLSYRCIFRLSSLLLLFIALDLHLLRFPPLRHILCFTKLQQNMRENLKLALPGLQRISSFSCLSGAALSANATLANTNICNGLIGEEILPTWDSPNSFRKVPSSPTLSRLDILSTSMQSSLSNLSCSPSTPTSEYDSYLSKSMSAPSGSEGFLNVKEVQVAGGAAGEDRVQAVCSEENGWLFCGIYDGFNGRDAADFLAGTLYETIVFYFNLLDWEAKNEASDGLDMDNSHPLDDGSITHERFSPLKNNSKNASDIHSVFENHSYAKAGMTNYPLRHGVLDSLQRALSQAENDFLHMVEQEMEDRPDLVSVGSCVLVVLLHGKDLYTLNLGDSRAVLATLDVRGNGGLKAVQLTESHTVDNELERARLHHDHPDDPTIIVGGKVKGKLKVTRAFGVGYLKSKKFNDALMGILRVPSLISPPYVSTQPALSIHRISKSDCFVIVGSDGLFDFFGNEEAVNLVRSYILSNPTGDPAKFLLEQLLLKAADCAGFSKEELITIPAGRRRKYHDDVTVIVIILGTNQRTTRASTSM 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13103837 13109717 + CmoCh14G016590.1 Cmo14g01659 396925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01659 545 CDD PP2Cc 179 532 IPR001932 -
Cmo14g01659 545 PANTHER PROTEIN PHOSPHATASE 2C 67 544 IPR015655 GO:0004722|GO:0006470
Cmo14g01659 545 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 67 544 - -
Cmo14g01659 545 Gene3D - 144 541 IPR036457 -
Cmo14g01659 545 ProSiteProfiles PPM-type phosphatase domain profile. 166 532 IPR001932 -
Cmo14g01659 545 Pfam Protein phosphatase 2C 263 483 IPR001932 -
Cmo14g01659 545 Coils Coil 294 314 - -
Cmo14g01659 545 SUPERFAMILY PP2C-like 180 533 IPR036457 -
Cmo14g01659 545 SMART PP2C_4 157 530 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01659 Cmo-Chr14:13103837 Cmo20g00446 Cmo-Chr20:2072912 3.88E-74 dispersed
Cmo14g01659 Cmo-Chr14:13103837 Cmo06g01492 Cmo-Chr6:10725568 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01659 - - bhj:120073713 851.662