Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01676 ATGTTAGTTTGGGTCTGTAATTGGGTTTGTTCTACTGGGGTTTCTTTCTTTGTTGTTGTTTTTGGTTATTTTCATTTGATTATGGGTGGGTGTTTTCCTTGTTTTGGATCCTCCGATGAAGACGGTAATGGCGTGAAGGATGCTACTAAAAAGGATTCAGCTAAGGATGGCTCTGCTGCTCAGTCTCACCATGTTACCAGAGTGAGCTCAGATAAATCGAAGTCGAAGAGTGTATCCGATGCTAAGAAGGAACCAACGGTTCAAAAGGATGGAACAACAGCACATATTGCAGCCCAAACGTTTACATTTCGGGAGCTCGCTACAGCCACGAAGAACTTCAGATCTGAATGCTTGCTGGGAGAAGGGGGGTTCGGAAGGGTTTACAAGGGTCGCTTGGAGAGCACGGGACAGGTAGTGGCTGTGAAGCAGCTCGACCGTAACGGTCTTCAAGGAAATCGGGAGTTTTTGGTGGAGGTTCTCATGCTTAGCCTGTTACATCACCCGAATCTTGTTAACTTGATAGGCTATTGTGCTGATGGGGATCAACGTCTTCTTGTTTACGAGTTCATGCCATTGGGTTCGTTGGAAGATCATTTGCACGATCTTCCACCTGATAAGGAGCCCTTGGATTGGAATATTAGAATGAAGATTGCAGCTGGTGCTGCAAAAGGATTGGAGTATTTGCACGACAAAGCAAACCCGCCTGTTATATATCGAGACTTGAAGTCGTCTAATATTCTTCTCGACGAGGGCTACCACCCGAAGCTGTCAGATTTCGGTCTAGCAAAACTCGGTCCAGTTGGTGATAAGACTCACGTCTCGACGAGAGTGATGGGAACATATGGTTATTGTGCTCCAGAGTATGCTATGACTGGTCAGCTCACTCTCAAATCAGATGTATATAGTTTCGGAGTCGTCTTTCTAGAACTCATCACAGGGCGTAAGGCGATCGATAATACTAGAGGTCCGGGGGAGCATAATCTCGTGGCATGGGCTCGACCACTTTTTAAAGATCGTCGAAAGTTCCCGAAGATGGCCGATCCACTGCTGCAAGGTCGTTATCCCATGCGGGGACTTTATCAGGCATTGGCCGTTGCAGCAATGTGCTTGCAGGAACAGGCTGCAACAAGACCTCTAATTGGGGACGTTGTTACTGCTTTGACATATTTAGCGTCCCAAGCTTATGATCCAAATGCAGCTGCTTCACAAAGCAATCGAATGGGTGGATCGACTCCACGAGCTCGAGATGATCGACGAGGTTTATCTGATGGATTGGATAGTCCGGACGAGCGTGGACGAGGACGTGGATCCCCATCGAACTACAGAAACTCACCGGACTACCGAAGGAAAGACCTCCATAGGGAATTGAGCTGTGGAGGTACAGAGGTGAACAAAATCGACACGGGAGGCGGATCCGGTCGAAAATGGGGATTGGATGAGCTGGAACGACAAGAATCTCTCCGAGACAGTCCTGTATATACGGGGAGAGGTAGGGAAACGCCGAGGAACCGTGACCTGAACAGAGAACGTGCAGTGGCTGAAGCAAAAGTGTGGGGCGAAAACTGGAGAGAGCGGAAGCGGGCAAACGCTGAAGGGAGCTTTGATGGTTCACAGGAATGA 1620 48.46 MLVWVCNWVCSTGVSFFVVVFGYFHLIMGGCFPCFGSSDEDGNGVKDATKKDSAKDGSAAQSHHVTRVSSDKSKSKSVSDAKKEPTVQKDGTTAHIAAQTFTFRELATATKNFRSECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNIRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQAYDPNAAASQSNRMGGSTPRARDDRRGLSDGLDSPDERGRGRGSPSNYRNSPDYRRKDLHRELSCGGTEVNKIDTGGGSGRKWGLDELERQESLRDSPVYTGRGRETPRNRDLNRERAVAEAKVWGENWRERKRANAEGSFDGSQE 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13208212 13213034 + CmoCh14G016760.1 Cmo14g01676 396942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01676 539 Gene3D Transferase(Phosphotransferase) domain 1 190 408 - -
Cmo14g01676 539 MobiDBLite consensus disorder prediction 45 89 - -
Cmo14g01676 539 Gene3D Phosphorylase Kinase; domain 1 83 189 - -
Cmo14g01676 539 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Cmo14g01676 539 MobiDBLite consensus disorder prediction 67 89 - -
Cmo14g01676 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Cmo14g01676 539 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 28 533 - -
Cmo14g01676 539 ProSiteProfiles Protein kinase domain profile. 113 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01676 539 PANTHER OS07G0668900 PROTEIN 28 533 - -
Cmo14g01676 539 SMART serkin_6 113 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01676 539 MobiDBLite consensus disorder prediction 444 460 - -
Cmo14g01676 539 CDD STKc_IRAK 119 388 - -
Cmo14g01676 539 MobiDBLite consensus disorder prediction 399 508 - -
Cmo14g01676 539 MobiDBLite consensus disorder prediction 411 436 - -
Cmo14g01676 539 SUPERFAMILY Protein kinase-like (PK-like) 95 387 IPR011009 -
Cmo14g01676 539 Pfam Protein kinase domain 117 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01473 Cmo14g01676 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00010 Cmo-Chr8:55204 Cmo14g01676 Cmo-Chr14:13208212 0 dispersed
Cmo14g00169 Cmo-Chr14:757185 Cmo14g01676 Cmo-Chr14:13208212 0 dispersed
Cmo14g01676 Cmo-Chr14:13208212 Cmo17g01367 Cmo-Chr17:10614486 0 dispersed
Cmo06g01474 Cmo-Chr6:10596544 Cmo14g01676 Cmo-Chr14:13208212 5.28E-16 transposed
Cmo14g01157 Cmo-Chr14:9114048 Cmo14g01676 Cmo-Chr14:13208212 1.06E-85 transposed
Cmo14g01676 Cmo-Chr14:13208212 Cmo06g01473 Cmo-Chr6:10592585 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74867 PF00069 Pkinase 1.70E-45 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01676 - - cmax:111479363 1066.22