Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01688 ATGGGGTGTGTTTTTGGCCGAGAGGTCTCCGCGAAGCCTGTCCAGAGAGCGGAGGCCGCGGCGGAGAAGGAGGAGGAGAGACCGAAGGCTGCGGCGGCGGAGGAAATTAGGGCTTCTGCTAAACCGGAGGTTGCTCTAGCTAATGCTAATGCTAATGCTCGCAATGGTGGCTGCAGGAAGGAGGTTGAGGATCATAGAGGTTCGAGGTCGAGAGGCGAGCGGCGGCGACGGCCGAATCCGAGATCGAGTAATCCGCCGAAACATGTGCATGGCGAGCAAGTCGCCGCCGGTTGGCCTGCTTGGCTCTCCGCTGTTGCCGGTGAGGCTATCAACGGATGGATTCCTCGCCGTGCTGATTCTTTCGAGAAGCTTGATAAGATTGGGCAAGGAACTTATAGTAATGTGTACAAAGCAAGGGATACTTTGACAGGGAAGATTGTGGCTCTAAAGAAGGTTCGTTTCGACAATTTGGAGCCCGAGAGTGTGAAATTTATGGCTCGAGAAATTCTCATTCTGCGACGTTTGGATCATCCTAACGTTGTGAAACTCGAAGGTTTAGTGACATCCCGGATGTCATGTAGTTTATATCTTGTGTTTGAATACATGGAGCACGATTTGGCTGGACTTGCTGCGAGCCCGACGATCAAGTTTACCGAACCGCAGGTTAAATGTTATATGAACCAATTGTTATCAGGGCTCGAACACTGTCACAACCGTCACGTGCTGCATCGCGATATAAAGGGATCGAATCTTCTGATTGGCAATGATGGGATCCTTAGGATAGCTGATTTCGGGTTAGCTTCCGTCTTTGATCTGAACCACAAGCAGCCAATGACAAGTAGGGTGGTTACGCTATGGTATCGACCTCCTGAACTTCTTCTCGGAGCTACCGATTATGGCGTTGGTGTAGACCTTTGGAGTGCTGGCTGCATTTTAGCTGAGTTGTTAGCTGGAAAGCCTATCATGCCCGGTCGCACGGAGGTCGAGCAGCTACATAAGATATTCAAGTTATGTGGCTCTCCTACAGAGGAATACTGGAAGAAGTCAAGGTTGCCTCATGCAACCATATTCAAGCCTCAACATTCATACAAGAGATGCACATCAGAGACGTTTAAAGACTTCCCGCCATCGTCTCTGCCGCTAATCGAGACACTTCTTGCAATCGACCCGGATGAACGCCTGACCGCCACTGCTGCGTTACATAGTGAGTTTTTCACTACCAAGCCATATGCCTGTGAGCCTTCCAGCCTCCCCAAGTATCCTCCAAGCAAGGAAATGGATGCAAAACTGCGGGATGAAGAAGCAAGAAGGCTAAGAGCTGCTGGCAGGAGCAATGCAGATGGGGTGAAGAAATCACGGGCACGCGATCGACCTGTTCGTGCAATTCCCGTTCCAGAAGCCAATGCTGAACTTCAGGCCAATCTCGATCGGCGACGTCTCATTACGCACGCAAATGCGAAGAGCAAGAGCGAAAAGTTTCCTCCTCCGCATCAAGATGGAGCTCTTGGCTACACTCTAGGAACTTCACATCACATCGATCCAATCTATGATCCTCCCGACGTTCCATTTAGCTCGATGAATTTCTCGTACCCGAAAGCAAACATTCATACATGGTCTGGTCCATTGATGGATCCAGCTGCTGTTGGTGCTCCAAGACGAAAAAAACACACAGCAGGGGATGGTCATTCATCGAAGTCGTCGAAGGACTTACGAAAAGATAAACACTCTGCTCGAGTCTAA 1740 50.11 MGCVFGREVSAKPVQRAEAAAEKEEERPKAAAAEEIRASAKPEVALANANANARNGGCRKEVEDHRGSRSRGERRRRPNPRSSNPPKHVHGEQVAAGWPAWLSAVAGEAINGWIPRRADSFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPTIKFTEPQVKCYMNQLLSGLEHCHNRHVLHRDIKGSNLLIGNDGILRIADFGLASVFDLNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTEEYWKKSRLPHATIFKPQHSYKRCTSETFKDFPPSSLPLIETLLAIDPDERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGRSNADGVKKSRARDRPVRAIPVPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGALGYTLGTSHHIDPIYDPPDVPFSSMNFSYPKANIHTWSGPLMDPAAVGAPRRKKHTAGDGHSSKSSKDLRKDKHSARV 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13249022 13252695 + CmoCh14G016880.1 Cmo14g01688 396954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01688 579 MobiDBLite consensus disorder prediction 17 36 - -
Cmo14g01688 579 SUPERFAMILY Protein kinase-like (PK-like) 114 410 IPR011009 -
Cmo14g01688 579 MobiDBLite consensus disorder prediction 485 506 - -
Cmo14g01688 579 PANTHER OS01G0367700 PROTEIN 66 561 - -
Cmo14g01688 579 SMART serkin_6 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01688 579 CDD STKc_CDK9_like 121 405 - -
Cmo14g01688 579 Gene3D Transferase(Phosphotransferase) domain 1 204 444 - -
Cmo14g01688 579 MobiDBLite consensus disorder prediction 1 93 - -
Cmo14g01688 579 PANTHER CELL DIVISION PROTEIN KINASE 66 561 - -
Cmo14g01688 579 MobiDBLite consensus disorder prediction 549 579 - -
Cmo14g01688 579 Pfam Protein kinase domain 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01688 579 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Cmo14g01688 579 MobiDBLite consensus disorder prediction 539 579 - -
Cmo14g01688 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Cmo14g01688 579 Gene3D Phosphorylase Kinase; domain 1 108 203 - -
Cmo14g01688 579 ProSiteProfiles Protein kinase domain profile. 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01464 Cmo14g01688 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01688 Cmo-Chr14:13249022 Cmo18g00235 Cmo-Chr18:1536998 0 dispersed
Cmo15g00259 Cmo-Chr15:1251813 Cmo14g01688 Cmo-Chr14:13249022 0 dispersed
Cmo20g00222 Cmo-Chr20:1063611 Cmo14g01688 Cmo-Chr14:13249022 4.49E-129 dispersed
Cmo10g01167 Cmo-Chr10:10390835 Cmo14g01688 Cmo-Chr14:13249022 0 transposed
Cmo12g01117 Cmo-Chr12:10215589 Cmo14g01688 Cmo-Chr14:13249022 0 transposed
Cmo14g01688 Cmo-Chr14:13249022 Cmo06g01464 Cmo-Chr6:10556839 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74868 PF00069 Pkinase 6.60E-68 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01688 K08819 - csv:101217952 1025.0