Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g01770 | ATGGATTCGAAAGGAAATGATGTGGAGCTGTATGGCCTTCTTATTATGGGAAGCGATCAATATCCGCAATACATACTACAGGGGGGCTCGGAACGCCCCTGGTCCGAGGAATGGGAGATTGATTTTTCTAAACTTGATATCCAAAAAGTTGTTGCTCACGGGACTTATAGAACTGTATTCAAGGGAACATATGACAACCAAGCTGTAGCAGTGAAGATATTGGACTGGGGGGATGGCCCTGTTTTGAGGGAATTTTTTCGGCAAAGAGTTGATGTTTGGCACAAGCTTCACCATCCTAATGTTACAAAATTTGTTGGGGCTTCAACAAAAGCTAGAAATCTTCAGATTCCTTCAAAACTCTCTTCAATGGATCATCAAAGCTCCATTTCACCTACGACTTGTTGTGTTGTTGTTGAGTATCTTCCTGGTGGGACATTAATAGAGTTTTTGATTAGGAACAGGAAAAGGAAACTCCCCTTTAAGGATGCCATTCAATTAGCTTTGGATCTCTCTAGAGGGCTTAGCTATCTACACTCCAACAAGATTATGCATCATGATGTCAGAACTGTAAATATGTTGATAGATGCCCACAGAACCCTTAAAATTGCTGATATTGGAGCTGCTCGTGTTAAAGCTTGGAATCCAAGAGATATGAATGGAAAAACTGGTACCGTTGAATACATGGCCCCAGAGATTCTTAAAGGGAAACCGTACAATATAACATGTGATGTCTATAGCTTCGGCATTTGCTTGTGGGAAATTTACTGCTGCGCCATGCCATACCCCAATCTTAGTTTCGCTGACATATCATCTGGAGTTGTTCATCAGAATCTGCGACCCATTATTCCGGAGTGCTGCCCAAATTCTCTGGCAAACGTGATGAGGAAATGCTGGGATGGCAACCCATCCGAACGCCCTGCAATGCATGAGGTTGGCGAAATGTTGGAAGCTATTGATACGAGTCAGGGAGGGGGAATGGTTTCTCCTGACCAAGTTCCTCGCAGCTTCTGTTTTAGGCCTTCTGGCTCGTCTCCTGGTTTGAAACCCTTGTGTTCGAGGTGTTCTATTCGGGTTATCTGTGTCGATCTTAGCAATGGGTTCGAAAGGAAATGA | 1113 | 43.67 | MDSKGNDVELYGLLIMGSDQYPQYILQGGSERPWSEEWEIDFSKLDIQKVVAHGTYRTVFKGTYDNQAVAVKILDWGDGPVLREFFRQRVDVWHKLHHPNVTKFVGASTKARNLQIPSKLSSMDHQSSISPTTCCVVVEYLPGGTLIEFLIRNRKRKLPFKDAIQLALDLSRGLSYLHSNKIMHHDVRTVNMLIDAHRTLKIADIGAARVKAWNPRDMNGKTGTVEYMAPEILKGKPYNITCDVYSFGICLWEIYCCAMPYPNLSFADISSGVVHQNLRPIIPECCPNSLANVMRKCWDGNPSERPAMHEVGEMLEAIDTSQGGGMVSPDQVPRSFCFRPSGSSPGLKPLCSRCSIRVICVDLSNGFERK | 370 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 13686586 | 13693459 | - | CmoCh14G017700.1 | Cmo14g01770 | 397036 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g01770 | 370 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 35 | 334 | - | - | |
Cmo14g01770 | 370 | Gene3D | Transferase(Phosphotransferase) domain 1 | 143 | 326 | - | - | |
Cmo14g01770 | 370 | CDD | STKc_MAP3K-like | 51 | 315 | - | - | |
Cmo14g01770 | 370 | SUPERFAMILY | Protein kinase-like (PK-like) | 22 | 315 | IPR011009 | - | |
Cmo14g01770 | 370 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 182 | 194 | IPR008266 | GO:0004672|GO:0006468 | |
Cmo14g01770 | 370 | Gene3D | Phosphorylase Kinase; domain 1 | 33 | 118 | - | - | |
Cmo14g01770 | 370 | Pfam | Protein tyrosine and serine/threonine kinase | 46 | 314 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo14g01770 | 370 | PANTHER | KINASE-LIKE PROTEIN | 35 | 334 | - | - | |
Cmo14g01770 | 370 | PRINTS | Tyrosine kinase catalytic domain signature | 176 | 194 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo14g01770 | 370 | PRINTS | Tyrosine kinase catalytic domain signature | 242 | 264 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo14g01770 | 370 | PRINTS | Tyrosine kinase catalytic domain signature | 286 | 308 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo14g01770 | 370 | PRINTS | Tyrosine kinase catalytic domain signature | 138 | 151 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo14g01770 | 370 | ProSiteProfiles | Protein kinase domain profile. | 45 | 318 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo14g01770 | Cmo-Chr14:13686586 | Cmo05g00777 | Cmo-Chr5:4440030 | 5.58E-66 | dispersed | |
Cmo14g01770 | Cmo-Chr14:13686586 | Cmo14g01771 | Cmo-Chr14:13694547 | 1.41E-151 | tandem | |
Cmo14g01770 | Cmo-Chr14:13686586 | Cmo17g01175 | Cmo-Chr17:9450541 | 9.57E-138 | wgd | |
Cmo14g01770 | Cmo-Chr14:13686586 | Cmo06g01395 | Cmo-Chr6:10228553 | 2.65E-164 | wgd | |
Cmo14g01770 | Cmo-Chr14:13686586 | Cmo08g00324 | Cmo-Chr8:2028972 | 1.21E-143 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74871 | PF07714 | PK_Tyr_Ser-Thr | 2.90E-53 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g01770 | - | - | cmos:111457467 | 723.776 |