Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01771 ATGACAACCAAGCTGTCGCAGGTAAACATCCTTTTCGCTTTTGATTTTGCTTCTGCTGCTTACATTCCGATAGCTGAACCCTACTTTTTCCATATTACAGTGAAGATATTGGAGTGGGGGGATGACCCTGTTTTGAGGGAATCATTTCGGCAAAAAGTTGATGCTTGGCACAAGCTTCACCATCCTAATGTTACGAAATTTGTTGGGGCTTCAACAAAAGCTATAAGTCTTCAGATTCCTTCAAAATCAAAAGTCTCTTCAATGAATCATCAAAACTCCATTTCACCTACGGATTGTTGTGTTGTTGTTGAGTATCTTCCTGGTGGGACATTAAAAGAGTTGTTGATGAAGCACAACAAAAAGAAACTTCCCTTCAAGGATGCCATTCACTTAGCTTTGGATCTCTCTAGAGGGCTTAGCTATCTACACTCCAACAACATTGTGCATCAAGATGTCAAACCTGAAAATATGTTGATAGATGCTCACAGAAGTCTTAAAATTGCTGATATTGGGGTTGCACGTGTTAAAGCTCGGAATCCAAATGATATGACTGGGGAATTAACTAGTACTGTCGAATACATTGCCCCAGAGGTTATTGAAGGGAAGCCATACAATAAAAGATGTGATGTCTATAGCTTTGGCATCTGCTTGTGGAAAATTTACAGTTGCGATATACCATACCCCGATCTTAGCTCTGCTGACATATCATCTGGAGTTAATCTGCGACCCGATATCCCGGAATGCTGTCCAAATTCTCTGGCAAAAGTGATGAGGAAGTGCTGGGATAGAAATCCATCCAAACGCCCTGAAATGCATAAGGTTGTCGAAATGTTGGAAGCCATTGAAAAGAGTAAAGGAGAGGGGATGGTTTCTCCTAACAAAGTCTCTTGCAGCTTCTGTTTCAGCCCTTTCGGCACGCCCAGTGGTCCTTAA 933 41.69 MTTKLSQVNILFAFDFASAAYIPIAEPYFFHITVKILEWGDDPVLRESFRQKVDAWHKLHHPNVTKFVGASTKAISLQIPSKSKVSSMNHQNSISPTDCCVVVEYLPGGTLKELLMKHNKKKLPFKDAIHLALDLSRGLSYLHSNNIVHQDVKPENMLIDAHRSLKIADIGVARVKARNPNDMTGELTSTVEYIAPEVIEGKPYNKRCDVYSFGICLWKIYSCDIPYPDLSSADISSGVNLRPDIPECCPNSLAKVMRKCWDRNPSKRPEMHKVVEMLEAIEKSKGEGMVSPNKVSCSFCFSPFGTPSGP 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13694547 13696764 - CmoCh14G017710.1 Cmo14g01771 397037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01771 310 PANTHER KINASE-LIKE PROTEIN 32 297 - -
Cmo14g01771 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Cmo14g01771 310 ProSiteProfiles Protein kinase domain profile. 1 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01771 310 PIRSF ILK 91 289 - -
Cmo14g01771 310 PIRSF ILK 19 87 - -
Cmo14g01771 310 CDD STKc_MAP3K-like 34 278 - -
Cmo14g01771 310 SUPERFAMILY Protein kinase-like (PK-like) 31 284 IPR011009 -
Cmo14g01771 310 Gene3D Transferase(Phosphotransferase) domain 1 30 285 - -
Cmo14g01771 310 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 32 297 - -
Cmo14g01771 310 SMART serkin_6 21 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01771 310 PRINTS Tyrosine kinase catalytic domain signature 141 159 IPR001245 GO:0004672|GO:0006468
Cmo14g01771 310 PRINTS Tyrosine kinase catalytic domain signature 189 199 IPR001245 GO:0004672|GO:0006468
Cmo14g01771 310 PRINTS Tyrosine kinase catalytic domain signature 249 271 IPR001245 GO:0004672|GO:0006468
Cmo14g01771 310 PRINTS Tyrosine kinase catalytic domain signature 103 116 IPR001245 GO:0004672|GO:0006468
Cmo14g01771 310 Pfam Protein tyrosine and serine/threonine kinase 31 278 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01395 Cmo14g01771 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01771 Cmo-Chr14:13694547 Cmo17g01175 Cmo-Chr17:9450541 3.16E-115 dispersed
Cmo14g01770 Cmo-Chr14:13686586 Cmo14g01771 Cmo-Chr14:13694547 1.41E-151 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74872 PF07714 PK_Tyr_Ser-Thr 2.10E-49 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01771 - - cmos:111457468 608.216