Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01778 ATGAAAACCTCAAACTTCCCTCTCCCAAAATCTCTCCTCCTCATATCCATCCTCGCCCTCCTCTCCAACCCTTCATATCAAGCGACTCCCCGGCCGCCATCGCCGCCCCCGCCGCCATTTCTCCCCAACCCGAGGCTTCTCAAGGCTTACACTGCTCTCCAAGCTTGGAAACATGCCATCACTGCCGACCCAAACAACTTCACCGCTGACTGGTACGGCCCCAACGTATGCAACTACTCCGGCATTTTCTGTGCCCCCGCTCCCGACGACCCCTATATCCTCACCGTCGCCGGGATCGACCTCAACCATGCCAACCTGTCGGGCACCCTACCCGACGACCTCGGCCTCCTGACCGACCTTGCTCTGTTCCACATCAACTCCAATCGCTTCTGCGGTACTGTCCCCGAGTCCTTCCAGTGCCTCACTCGCCTATTCGAGCTCGATCTCAGCAACAATGGCTTCTCCGGCGAATTCCCTTCTGCAATTCTCTCTCTTGCTGCTCTCAAATTCCTCGATATTCGATTCAACAAATTCCATGGGGATCTCCCTTCTCCCCTGTTTGACATGAAACTCGATGCTCTGTTCGTCAATAATAACGATTTCAAATTCTCCTTACCGGAAAACATCGGCAATTCCCCTGTTTCTGTTCTGGTTTTTGCTAATAACAACATCAATGGCTGCCTCCCCTCCAGTTTATCCAACATGAACAATACACTCAATGAAATTATAATCACGAATAGTGGGTTGAATGGGTGTTTGCCGCCGGAAATTGGGTCGTTGAGCAATCTCGCCGTCTTCGATGTCAGTGACAACAATCTTGTCGGACCACTGCCGGAGACGATGGCCGGAATGAAGAAATTGGAGCAGCTAAATGTCGCACATAACCAATTATCCGGTGAAATTCCGGCAAGTATTTGCTCGTTGCCAAAATTGCAGAATTTCACGTACTCGTATAATTTCTTCTGCAGTGAGCCGTCAGTGTGCCTGAAACTTCAGGCCAGTGATGACCAGAAAAATTGTTTGCCGGAAAGGCCACTGCAACGTTCGCCGGAGGAATGTAAAGCTTTCTACTCTTACTCTGTTGACTGCGGCGTCTTCAGTTTGATTAGTGATGTGATCTGTGTGTAA 1128 50.44 MKTSNFPLPKSLLLISILALLSNPSYQATPRPPSPPPPPFLPNPRLLKAYTALQAWKHAITADPNNFTADWYGPNVCNYSGIFCAPAPDDPYILTVAGIDLNHANLSGTLPDDLGLLTDLALFHINSNRFCGTVPESFQCLTRLFELDLSNNGFSGEFPSAILSLAALKFLDIRFNKFHGDLPSPLFDMKLDALFVNNNDFKFSLPENIGNSPVSVLVFANNNINGCLPSSLSNMNNTLNEIIITNSGLNGCLPPEIGSLSNLAVFDVSDNNLVGPLPETMAGMKKLEQLNVAHNQLSGEIPASICSLPKLQNFTYSYNFFCSEPSVCLKLQASDDQKNCLPERPLQRSPEECKAFYSYSVDCGVFSLISDVICV 375
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 13715371 13717483 - CmoCh14G017780.1 Cmo14g01778 397044
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01778 375 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 35 367 - -
Cmo14g01778 375 Gene3D Ribonuclease Inhibitor 211 335 IPR032675 -
Cmo14g01778 375 SUPERFAMILY L domain-like 49 330 - -
Cmo14g01778 375 Pfam Leucine rich repeat N-terminal domain 51 84 IPR013210 -
Cmo14g01778 375 Pfam Leucine rich repeat 239 297 IPR001611 GO:0005515
Cmo14g01778 375 Gene3D Ribonuclease Inhibitor 48 210 IPR032675 -
Cmo14g01778 375 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 35 367 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cmo06g01390 Cmo14g01778 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00642 Cmo-Chr10:2945225 Cmo14g01778 Cmo-Chr14:13715371 2.02E-139 dispersed
Cmo11g00596 Cmo-Chr11:2873279 Cmo14g01778 Cmo-Chr14:13715371 4.66E-141 dispersed
Cmo11g01999 Cmo-Chr11:13687292 Cmo14g01778 Cmo-Chr14:13715371 3.30E-124 dispersed
Cmo12g01271 Cmo-Chr12:11268328 Cmo14g01778 Cmo-Chr14:13715371 3.02E-139 dispersed
Cmo14g01778 Cmo-Chr14:13715371 Cmo17g00425 Cmo-Chr17:2835184 5.36E-104 dispersed
Cmo14g01778 Cmo-Chr14:13715371 Cmo06g01390 Cmo-Chr6:10200801 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01778 - - cmos:111457817 709.138