Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01806 ATGAAACCAGGGCTCCGGCCCACTCCGGCTGCAGTTCCGCGATCTGCCGGCACCACCCTTCTCGGGAAGTACGGCTTAGGCCGTCTTCTCGGCCGTGGAAGCTTCGCCAAAGTCTACCAAGCAGTTTCCTTGGCCGATAATTCCATCGTCGCCGTCAAAATTATCGACAAATCCAAAACCGTCGGCGCAACCCTTGAACGATGCATAGTCCGGGAGATCGCCGCCATGCGCCGACTCGATCACCACCCAAACATTCTGAAAATCCACGAAGTCATGGCCACCAAGTCCAAAATCTACCTGGTGGTGGAATTCGCCGCCGGAGGCGAACTCTTGGCGAAAATCTCCCGACGTGGACGTTTCACCGAAACCGTTGCTCGCCGATACTTTCAACAACTCGTCTCGGCCCTGAAATTCTGCCATGAAAATGGCGTTGTTCATCGCGATGTGAAACCGCAGAATCTTTTGCTGGACGAACAGGGCAATTTGAAAATCTCCGATTTTGGACTCTCTGCTTTACCCGAAAAACTCAAAGATGAATTGCTTCACACGGCTTGCGGAACTCCGGCATACTCGGCGCCGGAGGTCATGATCCGACGCGGAAACAGAGGATATGACGGAGGAAAGGCGGACGCCTGGTCTTGTGGAGTGATTTTATTCGTAATGCTTTCTGGGTTTCTCCCTTTCGAGGACAGGAACCTTGCGGCAATGTACAAGAAGATCCACCGACGAGAATTTCAAATCCCTAAATGGATATCGAAACCGGTCCGATTCTTAATTTATCACCTCCTCGATCCGAATCCCGAAACGAGGATGAGCATTGAGGCGCTAATGCAAAACCCTTGGTTCAAGAAATCGCTAGCACGGAAACAGAGTAACGAGAGCCTGATGCAGTCGATGAAGAATTATCGATTGGGGAAAGAGAGGGGAATAGGGGAAATGAACGCGTTCGATATAATTTCGATGTCATCGGGGTTGGATTTATCGGGGCTGTTTGAAACGACGGAGAAGAGGGCGGAGAGGAGGTTTACGTCGAGGGCGACGGTGAGGGAGGTGGAAGAGAGGGTGAGGGAGATCGGCGGGGTGTTGGGGTATGAGGTGGAGGCGGAGGCTGTGGCGAAGGGAGGGGCGATCGGAATGGGGAAGGGGAGGGTGGTGGTAGTGGTGGAAGTGGTGGAGATGGCGGTGGCGCCGGTGACATTGACGATGGTTGAGGTGAGGGTGATAAAAGGAGGGGAGGAATTTGAAGAGCTCCATTGGAGATGCTTTGAAGCTAAACTTGAAGGATTTGCTGTTCCATGGCAGATGAAATGTAATCTTTGA 1320 52.5 MKPGLRPTPAAVPRSAGTTLLGKYGLGRLLGRGSFAKVYQAVSLADNSIVAVKIIDKSKTVGATLERCIVREIAAMRRLDHHPNILKIHEVMATKSKIYLVVEFAAGGELLAKISRRGRFTETVARRYFQQLVSALKFCHENGVVHRDVKPQNLLLDEQGNLKISDFGLSALPEKLKDELLHTACGTPAYSAPEVMIRRGNRGYDGGKADAWSCGVILFVMLSGFLPFEDRNLAAMYKKIHRREFQIPKWISKPVRFLIYHLLDPNPETRMSIEALMQNPWFKKSLARKQSNESLMQSMKNYRLGKERGIGEMNAFDIISMSSGLDLSGLFETTEKRAERRFTSRATVREVEERVREIGGVLGYEVEAEAVAKGGAIGMGKGRVVVVVEVVEMAVAPVTLTMVEVRVIKGGEEFEELHWRCFEAKLEGFAVPWQMKCNL 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13824099 13825418 + CmoCh14G018060.1 Cmo14g01806 397072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01806 439 Pfam NAF domain 313 367 IPR004041 GO:0007165
Cmo14g01806 439 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Cmo14g01806 439 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01806 439 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01806 439 SUPERFAMILY Protein kinase-like (PK-like) 21 297 IPR011009 -
Cmo14g01806 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Cmo14g01806 439 Gene3D Kinase associated domain 1, KA1 309 430 - -
Cmo14g01806 439 Gene3D Phosphorylase Kinase; domain 1 26 109 - -
Cmo14g01806 439 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Cmo14g01806 439 Gene3D Transferase(Phosphotransferase) domain 1 110 307 - -
Cmo14g01806 439 PANTHER SERINE/THREONINE KINASE 16 435 - -
Cmo14g01806 439 Pfam Protein kinase domain 27 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01806 439 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 435 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g01091 Cmo14g01806 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01806 Cmo-Chr14:13824099 Cmo02g00704 Cmo-Chr2:4428434 2.35E-124 dispersed
Cmo14g01806 Cmo-Chr14:13824099 Cmo08g01091 Cmo-Chr8:7004141 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74873 PF00069 Pkinase 3.90E-70 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01806 K12761 - csv:101217555 694.501