Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01826 ATGAAACTTTCTCGTCTAAATTCGCTCCGGCGAGTTCAGTCCGGCGAGCTCATCATGAAGTTTCCTGACGATCAAGACGAATCCAAGAGGCCCCAATTCCCTCTCGATTCTAGCTGTTACAAAATCATCGATGAAATTGGGGTCGGCGTCAGCGCCGTCGTTTACAAAGCCATTTGCATTCCCATGAACTCTGCTGTGGTGGCCATCAAAGCCATTGACCTCGATCGATCACGAGCCGATTTCGATGACATTCGAAGAGAAGCCAAAATTCTGTCACTTCTCTCTCATCCAAACATTCTTAACGCCCACTGTTCTTTCACAGTCGATCGTCGCCTTTGGGTCGTGATGCCGTTCATGTCTGCCGGATCTTTACAGTCCATTATTACGTCGTCGTTTCCAGACGGCTTGCCGGAGCCCTGCATCGCTGTCGTTCTCCGGGAAATTCTACACGCTCTGACTTACCTCCACGACCAAGGCCACCTCCACCGCGACATTAAAGCCGGAAACATTCTGATGGACTCAAATGGGTCCGTCAAGCTAGCTGATTTCGGAGTTTCGGCATCCATTTTCGAGGCCAATTCCACACAGGGGGTGCCAATTTCTCCATCATCGACCTCGATGATGCTGAAGGAAATCGCGGGAACGCCATATTGGATGGCGCCGGAGGTGATTCACTCGCACAATGGGTACAGTTTGAAAGCGGATATATGGTCATTTGGAATCACGGCGTTGGAATTAGCCCACGGACGACCTCCCCTTTCTCATCTCCCACCTTCCAAGTCCCTCCTCCTGAAAATCACGCGAAGGTTTCGATTCTCGGATTACGAGAATCAACAAAGCAGCAATAACAAGAACAAATTTTCAAAAGGGTTCAAGGAATTAGTAGCCTCATGCCTTGATCAGGAGCCATCGAGAAGACCATGCGCCGATAAATTGCTCAAACATCCCTTTTTCAGGAACTGCAAGGGCCCTGATCTTCTCATAAAGACTGTATTACAAGGTTTGCCGAGTGTTGAAGAGAGATTCAAATTGGGAAAATTGCAGCGATTGCCATCGATGAAAACGGAGGAAGAAGATGAAGAGGAAATAGAGAAGGAAATTATAAAACAGAGGAGGATCAGCGGGTGGAATTTCAAGGAGGATGGGCTAGAGCTGGAGCCTGTTTTTCCAGGGGAAAACTGCGAGGAAGATGAATGTTCGATCATGAAACAGGTCCGATTCGGTGGGGAATCGATCATGGAGAAGGGTTCGAGGGATTCGAGTGAGTGCTGTTCGGGGGTATCGGATCTGAGTTCACCAACGGGGAACGGGAGGAGAGGCGGAGTGGAGGAGGAGGAGGAGGAGGGTGTTGACAGGGAGTCGATAATGGGTGGATTGGTGGCGCTGAAAAGGAGCTTGGACGAGCAGAGGAGGGCGGTGGGGAGTTTGATAGAGCTGATAGAAGGAGAGAAAGGGGGAGAGATGAGCAGAGAGGAGCAGATAGGGAGATTGATGGAGAAGATGACGAGGGAATTGGAGAATGAGCGGAAGAGGAACTTTGAATTGGAGATGGAGTTGGAATTTGTTAGGCTTCAGATCTCCGCTGCCCATAATACTGGCGCTGCTTAA 1608 49.69 MKLSRLNSLRRVQSGELIMKFPDDQDESKRPQFPLDSSCYKIIDEIGVGVSAVVYKAICIPMNSAVVAIKAIDLDRSRADFDDIRREAKILSLLSHPNILNAHCSFTVDRRLWVVMPFMSAGSLQSIITSSFPDGLPEPCIAVVLREILHALTYLHDQGHLHRDIKAGNILMDSNGSVKLADFGVSASIFEANSTQGVPISPSSTSMMLKEIAGTPYWMAPEVIHSHNGYSLKADIWSFGITALELAHGRPPLSHLPPSKSLLLKITRRFRFSDYENQQSSNNKNKFSKGFKELVASCLDQEPSRRPCADKLLKHPFFRNCKGPDLLIKTVLQGLPSVEERFKLGKLQRLPSMKTEEEDEEEIEKEIIKQRRISGWNFKEDGLELEPVFPGENCEEDECSIMKQVRFGGESIMEKGSRDSSECCSGVSDLSSPTGNGRRGGVEEEEEEGVDRESIMGGLVALKRSLDEQRRAVGSLIELIEGEKGGEMSREEQIGRLMEKMTRELENERKRNFELEMELEFVRLQISAAHNTGAA 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13910049 13911656 + CmoCh14G018260.1 Cmo14g01826 397092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01826 535 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 24 532 - -
Cmo14g01826 535 ProSiteProfiles Protein kinase domain profile. 40 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01826 535 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 24 532 - -
Cmo14g01826 535 Pfam Protein kinase domain 40 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01826 535 SMART serkin_6 40 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01826 535 Coils Coil 491 525 - -
Cmo14g01826 535 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Cmo14g01826 535 Gene3D Transferase(Phosphotransferase) domain 1 122 370 - -
Cmo14g01826 535 SUPERFAMILY Protein kinase-like (PK-like) 39 335 IPR011009 -
Cmo14g01826 535 Coils Coil 353 373 - -
Cmo14g01826 535 MobiDBLite consensus disorder prediction 421 435 - -
Cmo14g01826 535 Gene3D Phosphorylase Kinase; domain 1 28 118 - -
Cmo14g01826 535 MobiDBLite consensus disorder prediction 414 452 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01826 Cmo-Chr14:13910049 Cmo15g00350 Cmo-Chr15:1636510 2.44E-108 dispersed
Cmo16g01274 Cmo-Chr16:9085081 Cmo14g01826 Cmo-Chr14:13910049 5.53E-32 dispersed
Cmo14g01826 Cmo-Chr14:13910049 Cmo04g02836 Cmo-Chr4:20276632 2.43E-112 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74875 PF00069 Pkinase 8.60E-59 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01826 K08835 - csv:101215648 855.899