Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01833 ATGGCTGGTTCAGAGAGAAGAAACACCCCGCCGACACGGCTACAGAGCCAGGCTCCGGCATCCATTGTGATAAACCGAGCGTCGAATTGGAACGTGGCTATACCGTTGTTGACCCCTCTTGTATCAGCTTCACCTTGTGGTAATTCAAGCCAAGATGTGTTGTTGATGGGTGAGAATAAGGCGAGGGAAGAGACCAAAGGGCTAAACGTTACCAAGTGGCAACACCCGGCGTGTCCGTTGTATGATGGGCCACTCCCAATGGGCACCCCCTTTGTGCCGGTGGGGCTGTCGGGAGTGGATCATCATCACCCCACAGCAATCAACTCGCCTATTTACAAACAAAGCGATGAAAACAGCGGCGGTGGAAGCGGCAGTCGAGACGACGACGACGACAACAACCGTGACGAGCCTACAGAAGGGGCGGTCGAGGCTGGAACTCGAAGGCCAAGAGGCCGTCCACCTGGATCTAAGAACAAACCCAAACCGCCTATCTTCGTCACGCGTGACAGTCCCAACGCCCTTAGAAGCTACGTCCTAGAGGTCGCTGCGGGATCTGACGTGGCCGATTCCATCGCTCAATTCGCCCGTAAACGCCAGCGTGGCGTCTGTGTTCTCAGTGCAACGGGTTTGGTTGCTAACGTCACTTTGCGTCAGCCCGCTGCCCCTGGCTCCGTAATGCCACTCCAAGGAAGGTTCGAGATTCTTTCTTTAACCGGCGCGTTTTTACCAGGCCCGGCCCCACCTGGGTCCACTGGCCTGACCGTTTACTTGTCCGGCGGTCAAGGGCAGGTTGTCGGCGGTAGCGTTGTTGGGTCGCTTGTAGCTGCTGGACCCATTATGGTAATTGCTGCTACTTTTGCTAATGCGACATATGAAAGGTTGCCTCTTGAAGATCCCGACGACCATGAAGTTGGCAGTGGCTCCGCTTCACACGGCGGTGGTAGAAGCCCACCGCCGGAAATTAGAGGCAGTGGAGGAGGGCAGATGGGGAGTGGGATGCCGGAACCGACTTTGCCTCTCTATAATTTACTTCCGGATATGATGCCCAACGGAGTTCAGCTTGGGCACGACGGGTACGCTTATGTCCGGCCACCATATTGA 1101 55.95 MAGSERRNTPPTRLQSQAPASIVINRASNWNVAIPLLTPLVSASPCGNSSQDVLLMGENKAREETKGLNVTKWQHPACPLYDGPLPMGTPFVPVGLSGVDHHHPTAINSPIYKQSDENSGGGSGSRDDDDDNNRDEPTEGAVEAGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSYVLEVAAGSDVADSIAQFARKRQRGVCVLSATGLVANVTLRQPAAPGSVMPLQGRFEILSLTGAFLPGPAPPGSTGLTVYLSGGQGQVVGGSVVGSLVAAGPIMVIAATFANATYERLPLEDPDDHEVGSGSASHGGGRSPPPEIRGSGGGQMGSGMPEPTLPLYNLLPDMMPNGVQLGHDGYAYVRPPY 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 13926425 13928405 - CmoCh14G018330.1 Cmo14g01833 397099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01833 366 CDD DUF296 175 257 IPR005175 -
Cmo14g01833 366 Pfam Plants and Prokaryotes Conserved (PCC) domain 175 287 IPR005175 -
Cmo14g01833 366 ProSiteProfiles PPC domain profile profile. 171 312 IPR005175 -
Cmo14g01833 366 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 122 366 IPR014476 GO:0003680
Cmo14g01833 366 Gene3D - 174 303 - -
Cmo14g01833 366 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 122 366 - -
Cmo14g01833 366 SUPERFAMILY AF0104/ALDC/Ptd012-like 172 299 - -
Cmo14g01833 366 MobiDBLite consensus disorder prediction 297 338 - -
Cmo14g01833 366 MobiDBLite consensus disorder prediction 102 168 - -
Cmo14g01833 366 MobiDBLite consensus disorder prediction 122 146 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01833 Cmo-Chr14:13926425 Cmo06g01155 Cmo-Chr6:8855557 1.79E-68 dispersed
Cmo14g01833 Cmo-Chr14:13926425 Cmo17g00171 Cmo-Chr17:1002825 4.02E-12 wgd
Cmo14g01833 Cmo-Chr14:13926425 Cmo05g01254 Cmo-Chr5:9746104 3.13E-76 wgd
Cmo14g01833 Cmo-Chr14:13926425 Cmo06g01345 Cmo-Chr6:9973532 1.19E-154 wgd
Cmo14g01833 Cmo-Chr14:13926425 Cmo08g01070 Cmo-Chr8:6901830 5.93E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01833 - - cpep:111790297 610.912