Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01869 ATGATAAATTGTATTCGTTCAGGGGATCAGTTAAGAGTAGATGAAATGATTCACTCATCAGATTCTCTGGCAACTCGAGATTATTCAGCTAGTGGCTTTTCATCCCGAACGGGTGAGGTGGAACCAAAGGTGGATAATGTCAACATTGAAGAAGCTGAATCATCTCTTCGTGAGAGTGGCTATCTGAATTATGAGGAAGCACGAGCTTTACTAGGAAGGCTGGAGTATCAAAAGGGAAACATAGAAGCTGCTCTTCAAGTTTTTGAAGGAATAGATATTGATGCTGTAATTTCCAGGATAAAATCTTCCATTTCAACGAGATATGAACAAAATAGACGCCAGTCACAATGTGATGTTGTGCCTACTATGTCGATGCATGCCATTAGTTTACTTCTTGAAGCTATTTTTCTGAAAGCAAAGTCATTACAGGGTTTAGGAAGGTTTGTAGAGGCGGCCAAATCATGCAAACTAATTCTGGACACTGTTGAATCTGCTTTACCAGAAGGCTTACCTGAAAACTTTGCTATTGATTGTAAATTGCAAGAGACACTAACGAAGGCTGTTGAATTACTTCCAGAATTGTGGAAATCTGCCGGGTCTCCAGAAGAATCAATCTTGTCATATAGGCGTGCCCTTCTCTATCAATGGAATCTGGAAATGGAGACCAGAGCAAAAATAGAAAAAGAGTTTGCAATATTCCTTCTCTATAGTGGTTGTGATGCAAGTCCTCCCAATCTCCGTTCACAGATGGAAAGCTCATTCGTGCCAAGAAGTAATATGGAAGAGGCCATTCTTCTTTTAATGGTTCTGATGAGAAAATATATACTTGGATTGATTGTATGGGACCCCTCAATAATAGAGCATCTCTCGTTTGCTCTGTCTATTTCAGGGGGATTTGGTGCTTTAGCTAATGAGGTTGAACAATTGCCTCCAGGAATTATAAGCAGAAAAGAAAAATACTGCAAATTAGCTCTTTGTTACTATGGGGAAGGTAAAAGCTTCATTGCGTTGAATCTTTTGAAGAACTTCTTGAGTAACATAGAGAATGTAGACTGTCTACTGGAATTGTTGCTGGCTTCAAAGCTCTGTGGGGAAAATTTGGTCTGTCTTGATGAGGGGGTGACATACACATTGAGAGTGCTTTCGAAGCTGCGTGGTAAATGCATTCAGATGGCTTCGGTGGCTAATTGTTTACTTGGCGTGCTGTTGTCGGTTATGTCCAAATTAGTCGCTTCCGATTCTCAGAAAGCTCTGAAACAGTCTGAAGCGCTCAAGGCGCTACAAACTGCTGAGCAGCTGATGAGACAAAGAGATCCATTCATTGTTTATCATCTTTGTCTTGAATATGCTGAACAAAGGACGCTGGATATGGCTCTATACTACGCAAAACAGTTAGTGAACCTCGAGGTTGGCTCTAGTCTGAAGTCTTACTTACTCTTGGCCAGAATATTGTCTGCCCAGCAACGATTTGTCGATGCAGAGACTGTACTCAATGCTGCTCTTGAGCAGACAGGGAAGTGGGAACAGGGGGAACTCTTACGAACTAAAGCTAAGCTCCAGATAGCACAGGGCCAGTTAAAGAATGGTATAGAAACATATACTCAACTTCTTGCTATAATTCAAGTCCAGACCAAAAGTAGTGGCGTTGGAAAGATGCTTTCAAAGGATGTGAGAAAATCTGAGAGAAGTCTGGAAATTGATACATGGCATGACTTGGCCAATATCTACACAAGCTTGTCTCAGTGGCGGGATGCTGAGATATGTCTGTCAAAATTGCAGAAAATCAATCCGTATTCTGCTTCCAAATGGCATTCCACAGGTTTACTGTATGAGTCGAAGGGTCTTCCACGAGATGCTTTGCAAGCATACAACAAAGCATTGGACATTGATCCTGGCCATGTTCCCAGCTTGATATCCACTGCCAGTCTTCTCCAACAGCTAGGTGGGAGGCAGTCATTTCCTGTTGCAAGAAGTTTGCTAACCGACGCCCTTCGACTTGATCGAGCAAACCCTTCTGCTTGGTACAGTCTCGGGCTGCTGTATAAAGCTGATGTTGGGGCGTCTGCGCTGGAGGTTGCTGAATGCTTTGAGGCTGCATCTCTGCTTGAAGAGTCAGCACCGGTTGAACCTTTCAGATGA 2139 42.68 MINCIRSGDQLRVDEMIHSSDSLATRDYSASGFSSRTGEVEPKVDNVNIEEAESSLRESGYLNYEEARALLGRLEYQKGNIEAALQVFEGIDIDAVISRIKSSISTRYEQNRRQSQCDVVPTMSMHAISLLLEAIFLKAKSLQGLGRFVEAAKSCKLILDTVESALPEGLPENFAIDCKLQETLTKAVELLPELWKSAGSPEESILSYRRALLYQWNLEMETRAKIEKEFAIFLLYSGCDASPPNLRSQMESSFVPRSNMEEAILLLMVLMRKYILGLIVWDPSIIEHLSFALSISGGFGALANEVEQLPPGIISRKEKYCKLALCYYGEGKSFIALNLLKNFLSNIENVDCLLELLLASKLCGENLVCLDEGVTYTLRVLSKLRGKCIQMASVANCLLGVLLSVMSKLVASDSQKALKQSEALKALQTAEQLMRQRDPFIVYHLCLEYAEQRTLDMALYYAKQLVNLEVGSSLKSYLLLARILSAQQRFVDAETVLNAALEQTGKWEQGELLRTKAKLQIAQGQLKNGIETYTQLLAIIQVQTKSSGVGKMLSKDVRKSERSLEIDTWHDLANIYTSLSQWRDAEICLSKLQKINPYSASKWHSTGLLYESKGLPRDALQAYNKALDIDPGHVPSLISTASLLQQLGGRQSFPVARSLLTDALRLDRANPSAWYSLGLLYKADVGASALEVAECFEAASLLEESAPVEPFR 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14051061 14056094 + CmoCh14G018690.1 Cmo14g01869 397135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01869 712 SUPERFAMILY TPR-like 510 683 IPR011990 GO:0005515
Cmo14g01869 712 SMART tpr_5 132 165 IPR019734 GO:0005515
Cmo14g01869 712 SMART tpr_5 600 633 IPR019734 GO:0005515
Cmo14g01869 712 SMART tpr_5 566 599 IPR019734 GO:0005515
Cmo14g01869 712 SMART tpr_5 474 507 IPR019734 GO:0005515
Cmo14g01869 712 SMART tpr_5 510 543 IPR019734 GO:0005515
Cmo14g01869 712 ProSiteProfiles TPR repeat profile. 600 633 IPR019734 GO:0005515
Cmo14g01869 712 SUPERFAMILY TPR-like 438 538 IPR011990 GO:0005515
Cmo14g01869 712 Gene3D Tetratricopeptide repeat domain 551 706 IPR011990 GO:0005515
Cmo14g01869 712 Gene3D Tetratricopeptide repeat domain 301 547 IPR011990 GO:0005515
Cmo14g01869 712 PANTHER PROTEIN NPG1 1 712 IPR043376 -
Cmo14g01869 712 PANTHER OS10G0471400 PROTEIN 1 712 - -
Cmo14g01869 712 Pfam Tetratricopeptide repeat 607 632 IPR019734 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01314 Cmo14g01869 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00140 Cmo-Chr5:609364 Cmo14g01869 Cmo-Chr14:14051061 0 transposed
Cmo14g01869 Cmo-Chr14:14051061 Cmo19g00117 Cmo-Chr19:686724 0 wgd
Cmo14g01869 Cmo-Chr14:14051061 Cmo02g01776 Cmo-Chr2:10125829 0 wgd
Cmo14g01869 Cmo-Chr14:14051061 Cmo06g01314 Cmo-Chr6:9826153 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01869 K21843 - csv:101206105 1254.58