Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01901 ATGGATTCAGGGTTCTGCGCCGGCCATCTCGCGGAGCTCTTAGGTCCCAACACCACCAACGCCACCGGCGCTGCAAATTTCATCTGCGACCAATTTACCACCATCACCAACAACTTCTCCGACACCAAAAAAGCCCTCGATAACACCTACCTTCTCTTCTCCGCCTACCTCGTCTTCTCTATGCAACTCGGCTTCGCTATGCTTTGCGCCGGCTCTGTCCGCGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCTGGAGGCCTCTTCTACTACCTCTTCGGCTACGCATTTGCCTTCGGATCCCCTTCCAATGGCTTCATCGGCCGCCATAACTTTGGCCTTAGTTCCTTCCCTACCTCCACCGCTGATTACAGTTTCTTCCTCTACCAGTGGGCGTTTGCGATTGCCGCCGCTGGGATTACCAGTGGATCTATCGCTGAGCGGACTCAATTTGTCGCTTATTTGATTTATTCCTCTGTTTTGACTGGATTTGTTTATCCGGTGGTTTCTCACTGGTTCTGGTCTCCTGATGGTTGGGCTGGGGCTATGAAATCGGGAGGCGGATTGTTGTTCGGATCGGGAGTAATCGATTTCGCTGGCTCCGGCGTCGTCCATATGGTTGGGGGAATTGCAGGTCTGTGGGGCGCGTTGATCGAGGGGCCGAGAATCGGTCGATTTGACCACACGGGCCAGTCCGTAGCTATGCGAGGGCACAGCGCGTCTTTAGTCGTGCTCGGAACTTTCATGCTCTGGTTCGGATGGTACGGTTTCAATCCAGGTTCGTTCGCGAAGATTCTCGTCCCGTACACCACCGGGAACTTCTACGGCCAATGGAGCGCCGTCGGACGGACAGCGGTTACCACCACACTCGCCGGATGCACAGCGGCACTCACCACACTCTTCGGGAAGAGATTCCTCTCAGGACACTGGAACGTGACGGACGTTTGCAATGGACTCCTCGGCGGATTCGCCGCCATCACAGCCGGCTGCTCCGTCGTCGAACCGTGGGCGGCAATCATCTGCGGCTTCGTAGCCGCCCTCGTACTAATAACCTGCAACCACATCGCCGAGAAAGCGAAGTACGACGATCCGCTAGAAGCCGCCCAGCTTCACGGCGGCTGCGGCGCGTGGGGAGTGATATTCACAGCACTATTCGCAACCAAGGAGTACGTGACGGAGGTGTACGGTGGATCTCAACGACCTTACGGACTCCTAATGGGCGGCGGCGGGAGGTTACTTGCAGCGCATTTGATACAGATTGTGGTGATCGTAGGGTGGGTGAGCGGGACGATGGGGCCATTGTTCTTTGTTCTTCACAAACTGAAGCTTCTGAGAATCTCTAGTGAAGATGAAATGGCGGGGATGGATCTGACCCGCCATGGGGGATTTGCTTACACATATCATGATGAAGATGAAGCGCAGAAAAGGGGGATTCAATTGAGCAGAGTGGAACCAAGATCTGCAACCCCCATTGGACACTAA 1500 55.4 MDSGFCAGHLAELLGPNTTNATGAANFICDQFTTITNNFSDTKKALDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGSPSNGFIGRHNFGLSSFPTSTADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGFVYPVVSHWFWSPDGWAGAMKSGGGLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHTGQSVAMRGHSASLVVLGTFMLWFGWYGFNPGSFAKILVPYTTGNFYGQWSAVGRTAVTTTLAGCTAALTTLFGKRFLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGFVAALVLITCNHIAEKAKYDDPLEAAQLHGGCGAWGVIFTALFATKEYVTEVYGGSQRPYGLLMGGGGRLLAAHLIQIVVIVGWVSGTMGPLFFVLHKLKLLRISSEDEMAGMDLTRHGGFAYTYHDEDEAQKRGIQLSRVEPRSATPIGH 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14177695 14179194 + CmoCh14G019010.1 Cmo14g01901 397167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01901 499 PANTHER AMMONIUM TRANSPORTER 7 494 - -
Cmo14g01901 499 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 7 494 - -
Cmo14g01901 499 SUPERFAMILY Ammonium transporter 45 452 - -
Cmo14g01901 499 Pfam Ammonium Transporter Family 50 471 IPR024041 GO:0008519|GO:0016020|GO:0072488
Cmo14g01901 499 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Cmo14g01901 499 Gene3D Ammonium transporter AmtB like domains 25 490 IPR029020 -
Cmo14g01901 499 TIGRFAM amt: ammonium transporter 47 471 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo12g00985 Cmo-Chr12:9210128 Cmo14g01901 Cmo-Chr14:14177695 0 dispersed
Cmo14g01901 Cmo-Chr14:14177695 Cmo02g01754 Cmo-Chr2:10037187 0 wgd
Cmo14g01901 Cmo-Chr14:14177695 Cmo08g01012 Cmo-Chr8:6583834 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01901 K03320 - csv:101208366 907.516