Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01923 ATGCTCAAGGAACGGGCAGTTAACTATGAACAGCTATGCTCTGATGCGGAGTATTCAATGCAGCTAACATCTGGAACCACCCATATGGGACAAAGAATTATGCATTCACATTCTGAACCCCTACTGCAGGAACAGGATCAAAAGTCGAATCATGGAGGATTCTATCCACTGACCTCATTCATTGACAGTGATCAGTCACCTTCACTGGCAATGTCAATTTCCTTGCAGGATTTGTCAACGATGTGGAAACAGAGAGTTGACGGGGTATTTCAAGATGCTAAATATGAGAATCATCGAAAGGTGGCATCTGGTAGTGAAAATGAAACATATGAAGAATGCAATTTTGATGAAAAAAAGGCCAATTTCAATGGAGGTATTTATGTTCCATCACTTGATGATGACCAAAAATACAAATATTTTCAACATGTTGACTACCAACAAAATGTTTGTCTCCTCAAAGAGGTTCAAAGCTTTAGAGGCAGATTTTCTGCCGAACGAGGTCTTGAATTAGAAACTTCTGCAGACACCACGGGTGGCCCCACCCTCGTTTACCATTTAGAAACAACTGCTCCAAAATATTTCGAGGAGAGCCAATATTCTACTAAGGATAAACAAACTACTAATATAGTAAGCAACTACGGCCTGCAGATCATAAAGGATGCAGATCTTAAAGAACTGCAAGAGTTGGGATCTGGGACGTTTGGCACAGTTTTTCATGGAAAATGGAGGGGAACAGATGTAGCTATTAAGAGAATAAACAAGAGTTGCTTCTCAGGCAGTTTTTCAGAGCAAGAACGACTGGTACGACATAATTTGAAAATAGATCTTTTGAAATGTATAACCGATTCCTGTGCTCATGTTGGTGAATATGTAAAAGTTGTTCATTTTATTTTCTCAAATGGACGAGAGACGATTTCTTACTCACCCACTTTACTCGCTCTTTCTTACTTTTCTTTCTTATGGGACATGCTTCCTACTCGTAAGTATGAGATCCTTGGAGCCCAAACTAGAGATTTCTGGAGAGAAGCAAAGATTCTCTCGACTCTTCACCATCCAAACGTTTTGGCTTTTTATGGGTTGGTTCCTGATGGACCTGATGGAACATTGGCAACTGTAACCGAGTATATGGTAAACGGTTCGTTAAGGCACGTCCTTTTGAGGAAGGACAGAGTGCTTGATCGTCGTAAAAGGCTTATAATTGCAATGGATGCAGCTTCTGGCATGGAATATTTGCATTTGAAAAACATTATTCATTTTGATCTGAAGTGTGATAATTTGTTAGTCAACTTGAGGGATCCTGAACGACCTGTATGTAAGGTGGGAGATTTTGGTCTGTCAAGGATTAAGCGCAACACACTTGCTTCGGGAGGCACGAGTGGAACTCTTCCATGGATGGCACCAGAATTGTTTGATAGTAGCAGTTCTAAGGTCTCTGAGAAGGTTGATGTTTTCTCTTTCGGTATTGCAATGTGGGAGATTTTGACAGGCGAGGAGCCATATGCTAGCATGCATTGCGGTGCCATCATCAGTGGAATTGTAAGTAATACTCTTAGACCGCCGATCCCGAAACGCTGTGATCCCGAATGGAAAAGGCTAATGGAAGAGTGTTGGTATCCTGAACCTGCAGCAAGGTCTTCATTCACAGAGATAACGAATAGACTTCGTAGCATGTCGGTAGCGGTTCGGATCAGAAAGAGACCAAATGTAACAACTGGCTTGCTCACTCACTCAGCTGAAGCAACCCATAGATCTGACGTTTATGGAGTTGATAATTCCCATGCGCTTCCTAATTTCGGCATTATCCATTATCCTGAGACGGCACGCATTCCCATGCAACCGCCTATTTTGATTGCTATATTTACCTGA 1866 41.75 MLKERAVNYEQLCSDAEYSMQLTSGTTHMGQRIMHSHSEPLLQEQDQKSNHGGFYPLTSFIDSDQSPSLAMSISLQDLSTMWKQRVDGVFQDAKYENHRKVASGSENETYEECNFDEKKANFNGGIYVPSLDDDQKYKYFQHVDYQQNVCLLKEVQSFRGRFSAERGLELETSADTTGGPTLVYHLETTAPKYFEESQYSTKDKQTTNIVSNYGLQIIKDADLKELQELGSGTFGTVFHGKWRGTDVAIKRINKSCFSGSFSEQERLVRHNLKIDLLKCITDSCAHVGEYVKVVHFIFSNGRETISYSPTLLALSYFSFLWDMLPTRKYEILGAQTRDFWREAKILSTLHHPNVLAFYGLVPDGPDGTLATVTEYMVNGSLRHVLLRKDRVLDRRKRLIIAMDAASGMEYLHLKNIIHFDLKCDNLLVNLRDPERPVCKVGDFGLSRIKRNTLASGGTSGTLPWMAPELFDSSSSKVSEKVDVFSFGIAMWEILTGEEPYASMHCGAIISGIVSNTLRPPIPKRCDPEWKRLMEECWYPEPAARSSFTEITNRLRSMSVAVRIRKRPNVTTGLLTHSAEATHRSDVYGVDNSHALPNFGIIHYPETARIPMQPPILIAIFT 621
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14273940 14277859 + CmoCh14G019230.1 Cmo14g01923 397189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01923 621 Gene3D Phosphorylase Kinase; domain 1 216 293 - -
Cmo14g01923 621 SMART serkin_6 223 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01923 621 PANTHER SERINE-THREONINE PROTEIN KINASE 336 566 - -
Cmo14g01923 621 PANTHER SERINE-THREONINE PROTEIN KINASE 211 269 - -
Cmo14g01923 621 CDD STKc_MAP3K-like 229 554 - -
Cmo14g01923 621 ProSiteProfiles Protein kinase domain profile. 223 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01923 621 Pfam Protein tyrosine and serine/threonine kinase 335 554 IPR001245 GO:0004672|GO:0006468
Cmo14g01923 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Cmo14g01923 621 ProSitePatterns Protein kinases ATP-binding region signature. 229 250 IPR017441 GO:0005524
Cmo14g01923 621 PRINTS Tyrosine kinase catalytic domain signature 373 386 IPR001245 GO:0004672|GO:0006468
Cmo14g01923 621 PRINTS Tyrosine kinase catalytic domain signature 481 503 IPR001245 GO:0004672|GO:0006468
Cmo14g01923 621 PRINTS Tyrosine kinase catalytic domain signature 410 428 IPR001245 GO:0004672|GO:0006468
Cmo14g01923 621 PRINTS Tyrosine kinase catalytic domain signature 525 547 IPR001245 GO:0004672|GO:0006468
Cmo14g01923 621 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 336 566 - -
Cmo14g01923 621 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 211 269 - -
Cmo14g01923 621 Gene3D Transferase(Phosphotransferase) domain 1 325 587 - -
Cmo14g01923 621 SUPERFAMILY Protein kinase-like (PK-like) 210 553 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01273 Cmo14g01923 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01923 Cmo-Chr14:14273940 Cmo18g00250 Cmo-Chr18:1655442 7.71E-18 dispersed
Cmo14g01923 Cmo-Chr14:14273940 Cmo06g01273 Cmo-Chr6:9595662 1.54E-23 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74880 PF07714 PK_Tyr_Ser-Thr 9.20E-54 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01923 - - cpep:111790082 501.516