Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01987 AAGGCTGTCTATGTGGCTCCGATTCGCAATGGTTTCGGCAGTTCCGACATTTTCTCAGCTTACAAACAGCGCCAGCGGAACCCTTTCAGTTCTCTTTCTTCTTCTTCATTTCTCTCCGACCTTGCGAGAGCCGAGCGACACATTACACTCTTCGCCATGTTCCGACGAGCTTCCAGCCTTTTGGCCCGTTCTCATTTCTCTGCAAGGACTAGATCCTTCTCTGCCGATCTGCCGGCGGCCTCTTCCACCGACGATGCCTTTGTCGCCGCCTGGAAGAAGATGATCCCTAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGTCTCCTCGACCTGCTACGCCTTCTTCTATCCCTAGTAAGCTCACTGTCAATTTCGTGCTTCCCTATGCCTCCGAGCTCTCGGCCAAAGAGGTTGACATGGTCATCATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTTGCTACAATAGCAGAGTTGAAGCCAGGGGTTCTATCAGTGCATGAAGGGAACGACACAAAAAAGTACTTCGTCAGCAGTGGTTTCGCATTCATCCATGGAAACTCATACGCTGACATAATCGCTGTCGAAGCTGTACCCGTAGAGCAAATCGACACCAGCCAAGTACAGAAGGGTCTTGCTGAATTCACCCAGAAGTTAAATTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATCGGCATTGACGTGCACAGCGCCTTGAACGCTGCCATTACAGGATAG 759 50.2 KAVYVAPIRNGFGSSDIFSAYKQRQRNPFSSLSSSSFLSDLARAERHITLFAMFRRASSLLARSHFSARTRSFSADLPAASSTDDAFVAAWKKMIPNIDPPKTPLSFMSPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGNDTKKYFVSSGFAFIHGNSYADIIAVEAVPVEQIDTSQVQKGLAEFTQKLNSASTDLEKAEAQIGIDVHSALNAAITG 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 14605313 14608101 - CmoCh14G019870.1 Cmo14g01987 397253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01987 252 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 122 193 IPR020546 GO:0015986
Cmo14g01987 252 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 53 252 IPR001469 GO:0015986|GO:0045261|GO:0046933
Cmo14g01987 252 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 122 203 IPR036771 -
Cmo14g01987 252 Hamap ATP synthase epsilon chain [atpC]. 120 240 IPR001469 GO:0015986|GO:0045261|GO:0046933
Cmo14g01987 252 Gene3D - 111 208 IPR036771 -
Cmo14g01987 252 Coils Coil 217 237 - -
Cmo14g01987 252 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 134 240 IPR001469 GO:0015986|GO:0045261|GO:0046933
Cmo14g01987 252 CDD F1-ATPase_delta 122 245 IPR001469 GO:0015986|GO:0045261|GO:0046933
Cmo14g01987 252 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 53 252 - -
Cmo14g01987 252 Gene3D - 209 250 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01217 Cmo14g01987 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01987 Cmo-Chr14:14605313 Cmo06g01217 Cmo-Chr6:9257345 7.59E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01987 K02134 - csv:101206104 353.984