Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g01987 | AAGGCTGTCTATGTGGCTCCGATTCGCAATGGTTTCGGCAGTTCCGACATTTTCTCAGCTTACAAACAGCGCCAGCGGAACCCTTTCAGTTCTCTTTCTTCTTCTTCATTTCTCTCCGACCTTGCGAGAGCCGAGCGACACATTACACTCTTCGCCATGTTCCGACGAGCTTCCAGCCTTTTGGCCCGTTCTCATTTCTCTGCAAGGACTAGATCCTTCTCTGCCGATCTGCCGGCGGCCTCTTCCACCGACGATGCCTTTGTCGCCGCCTGGAAGAAGATGATCCCTAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGTCTCCTCGACCTGCTACGCCTTCTTCTATCCCTAGTAAGCTCACTGTCAATTTCGTGCTTCCCTATGCCTCCGAGCTCTCGGCCAAAGAGGTTGACATGGTCATCATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTTGCTACAATAGCAGAGTTGAAGCCAGGGGTTCTATCAGTGCATGAAGGGAACGACACAAAAAAGTACTTCGTCAGCAGTGGTTTCGCATTCATCCATGGAAACTCATACGCTGACATAATCGCTGTCGAAGCTGTACCCGTAGAGCAAATCGACACCAGCCAAGTACAGAAGGGTCTTGCTGAATTCACCCAGAAGTTAAATTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATCGGCATTGACGTGCACAGCGCCTTGAACGCTGCCATTACAGGATAG | 759 | 50.2 | KAVYVAPIRNGFGSSDIFSAYKQRQRNPFSSLSSSSFLSDLARAERHITLFAMFRRASSLLARSHFSARTRSFSADLPAASSTDDAFVAAWKKMIPNIDPPKTPLSFMSPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGNDTKKYFVSSGFAFIHGNSYADIIAVEAVPVEQIDTSQVQKGLAEFTQKLNSASTDLEKAEAQIGIDVHSALNAAITG | 252 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 14605313 | 14608101 | - | CmoCh14G019870.1 | Cmo14g01987 | 397253 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g01987 | 252 | Pfam | ATP synthase, Delta/Epsilon chain, beta-sandwich domain | 122 | 193 | IPR020546 | GO:0015986 | |
Cmo14g01987 | 252 | PANTHER | ATP SYNTHASE DELTA/EPSILON CHAIN | 53 | 252 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Cmo14g01987 | 252 | SUPERFAMILY | Epsilon subunit of F1F0-ATP synthase N-terminal domain | 122 | 203 | IPR036771 | - | |
Cmo14g01987 | 252 | Hamap | ATP synthase epsilon chain [atpC]. | 120 | 240 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Cmo14g01987 | 252 | Gene3D | - | 111 | 208 | IPR036771 | - | |
Cmo14g01987 | 252 | Coils | Coil | 217 | 237 | - | - | |
Cmo14g01987 | 252 | TIGRFAM | ATP_synt_epsi: ATP synthase F1, epsilon subunit | 134 | 240 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Cmo14g01987 | 252 | CDD | F1-ATPase_delta | 122 | 245 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Cmo14g01987 | 252 | PANTHER | ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL | 53 | 252 | - | - | |
Cmo14g01987 | 252 | Gene3D | - | 209 | 250 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo06g01217 | Cmo14g01987 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo14g01987 | Cmo-Chr14:14605313 | Cmo06g01217 | Cmo-Chr6:9257345 | 7.59E-133 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g01987 | K02134 | - | csv:101206104 | 353.984 |