Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo14g02016 | ATGGCGGGCTTAGATTTGGGCTCTGCTTCTAACTTTGTCCATCAACTTCAGCACCGTTCCGTGGATCTCCACTTGCAGCGGCCGCCGGACGGAGACGACGGTTCCGACCAGTTCCACGGCCTTGATGACGAGCAGCAACCGAACTCTGGTGGCGAAATCGTGGCCCGGCGGTCGAGAGGTCGACCGCCTGGGTCTAAAAATAAACCGAAGCCACCGGTTATTATTACCAGAGAAAGCGCTAACACCCTTCGTGCACACATCTTGGAAGTCAACACCGGTTGCGATGTGTTTGACTCGGTGGCTACTTATGCCCGGAAACGCCAACGGGGGATCTGCATCTTGAGCGGCACCGGCGTCGTCACCAACGTTACTTTACGGCAACCCGCGTCCGGCGGCGCCGTTCTCACGCTTCCCGGAAGGTTTGAGATATTGTCTTTGTCGGGATCGTTTTTGCCGCCGCCGGCTCCGCCAGGAGCGACGAGTTTGAGTATCTTCCTTGGCGGTGGACAAGGGCAGATTGTGGGAGGGAATGTTGCTGGCTCTTTGATTGCTTCTGGACCGGTGACTGTTATTGTGTCGTCGTTTACGAATGTTGCGTACGAGAGGCTGCCGTTGGATGAGGAGGAACCGTCCAACGGTGGTGGTGGCGGTGGTGGAGGGAGCCTTAGCAACCCGTTTCCGGACCCGTCGGTGGGGTTGCCGTTCCTTAATCTGCCATTGAACATGCCGGGGAATCAAAATCAGCTGCCGGTGGAGGGATGGAACTCCGGTGGGGGAGCATCTTATTGA | 789 | 57.29 | MAGLDLGSASNFVHQLQHRSVDLHLQRPPDGDDGSDQFHGLDDEQQPNSGGEIVARRSRGRPPGSKNKPKPPVIITRESANTLRAHILEVNTGCDVFDSVATYARKRQRGICILSGTGVVTNVTLRQPASGGAVLTLPGRFEILSLSGSFLPPPAPPGATSLSIFLGGGQGQIVGGNVAGSLIASGPVTVIVSSFTNVAYERLPLDEEEPSNGGGGGGGGSLSNPFPDPSVGLPFLNLPLNMPGNQNQLPVEGWNSGGGASY | 262 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 14758803 | 14759903 | - | CmoCh14G020160.1 | Cmo14g02016 | 397282 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo14g02016 | 262 | MobiDBLite | consensus disorder prediction | 24 | 40 | - | - | |
| Cmo14g02016 | 262 | CDD | DUF296 | 84 | 195 | IPR005175 | - | |
| Cmo14g02016 | 262 | MobiDBLite | consensus disorder prediction | 205 | 226 | - | - | |
| Cmo14g02016 | 262 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 1 | 257 | IPR014476 | GO:0003680 | |
| Cmo14g02016 | 262 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 80 | 208 | - | - | |
| Cmo14g02016 | 262 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN | 1 | 257 | - | - | |
| Cmo14g02016 | 262 | MobiDBLite | consensus disorder prediction | 24 | 73 | - | - | |
| Cmo14g02016 | 262 | ProSiteProfiles | PPC domain profile profile. | 80 | 217 | IPR005175 | - | |
| Cmo14g02016 | 262 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 84 | 197 | IPR005175 | - | |
| Cmo14g02016 | 262 | Gene3D | - | 83 | 211 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo06g01155 | Cmo-Chr6:8855557 | Cmo14g02016 | Cmo-Chr14:14758803 | 1.05E-63 | dispersed | |
| Cmo14g02016 | Cmo-Chr14:14758803 | Cmo19g00257 | Cmo-Chr19:1873601 | 3.96E-88 | dispersed | |
| Cmo17g00030 | Cmo-Chr17:135628 | Cmo14g02016 | Cmo-Chr14:14758803 | 1.09E-68 | dispersed | |
| Cmo14g02016 | Cmo-Chr14:14758803 | Cmo17g00057 | Cmo-Chr17:290693 | 1.19E-99 | wgd | |
| Cmo14g02016 | Cmo-Chr14:14758803 | Cmo02g01651 | Cmo-Chr2:9524324 | 1.71E-92 | wgd | |
| Cmo14g02016 | Cmo-Chr14:14758803 | Cmo08g00948 | Cmo-Chr8:6171397 | 1.30E-94 | wgd | |
| Cmo14g02016 | Cmo-Chr14:14758803 | Cmo08g00918 | Cmo-Chr8:5986572 | 2.19E-67 | wgd | |
| Cmo14g02016 | Cmo-Chr14:14758803 | Cmo08g00948 | Cmo-Chr8:6171397 | 1.30E-94 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo14g02016 | - | - | csv:101220959 | 419.468 |