Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g02040 | ATGGAGGAGAGAGAAGCCATAAATACAGGAGTAACAGTGATAGGAGCCGAAGCTCCGTCGGCTTACCACGTAGCTCCGAGAACCGAGAACCCGCCGCCGGCTAGCGGCGGCGGTGGCGGTTCGCCAACCGTCGCCGCTTCGCCGGTCAGTGTGGGGCTACCCGGAAGTGAAACCACAGGGAAAAAGAAGCGGGGGAGACCTAGAAAGTACGGTCCAGATGGAACGGTAACCATGGCATTGTCACCATTGCCGCTTTCTTCCTCAGCTCCGGGGGCCGGCGGCTTCTCCATCACGAAGCGGGGGAAGGGCCGGCTCGGCGGCTCTGAATTCAAGCACCACAAGAAAATGGGAATGGAATATATAGGAGAATGGAATGCGTGTTCTGTCGGTACTAATTTCATGCCTCATATCATCACGGTCAATGCTGGCGAGGATGTCACTATGAAGATCATATCATTTTCCCAACAAGGTCCTCGAGCGATCTGTATTCTTTCTGCGAATGGTGTAATTTCCAATGTCACTCTCCGGCAGCCCGATTCTTCAGGTGGTACTTTAACATATGAGGGTCGTTTCGAGATACTTTCATTGTCTGGATCGTTCATGCCTACTGAAAATCAAGGATCGAGAAGCAGGTCAGGTGGGATGAGTGTCTCCTTGGCGAGCCCGGACGGTCGTGTTGTTGGGGGAGGGGTAGCTGGTTTGCTTATAGCTGCAGGCCCTGTACAGGTTGTGGTAGGGAGTTTTCTACCAACTAGTAGCCAACAGGAGCCGAAAGTAAAGAAACAGAAGCCTGAATCAGTACCAGCTGCAGCCCCTGTTGCAGCCCCGACCACAACACCAGCCACCACCGTGCCGACTTCCAATGCCGATACAGACGACAGTTTAAACGGTAACGGTCAACCAAATCCCGGGTCCCTAAAACCGGCCAGTTTTGCTCCTTCGGCTTTCCAGAGAGACAATTGGGGTGCCAATGCTGCCGTGCGTTCTTCCTTGCAGGAGCCGAGAAATTCGCCCACCGACATCAATATATCGCTCCCGGGCTAA | 1044 | 53.83 | MEEREAINTGVTVIGAEAPSAYHVAPRTENPPPASGGGGGSPTVAASPVSVGLPGSETTGKKKRGRPRKYGPDGTVTMALSPLPLSSSAPGAGGFSITKRGKGRLGGSEFKHHKKMGMEYIGEWNACSVGTNFMPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTENQGSRSRSGGMSVSLASPDGRVVGGGVAGLLIAAGPVQVVVGSFLPTSSQQEPKVKKQKPESVPAAAPVAAPTTTPATTVPTSNADTDDSLNGNGQPNPGSLKPASFAPSAFQRDNWGANAAVRSSLQEPRNSPTDINISLPG | 347 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 14913849 | 14918553 | - | CmoCh14G020400.1 | Cmo14g02040 | 397306 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g02040 | 347 | CDD | DUF296 | 135 | 248 | IPR005175 | - | |
Cmo14g02040 | 347 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 135 | 248 | IPR005175 | - | |
Cmo14g02040 | 347 | ProSiteProfiles | PPC domain profile profile. | 130 | 269 | IPR005175 | - | |
Cmo14g02040 | 347 | PANTHER | AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN | 1 | 346 | - | - | |
Cmo14g02040 | 347 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 133 | 257 | - | - | |
Cmo14g02040 | 347 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 1 | 346 | IPR039605 | GO:0003680 | |
Cmo14g02040 | 347 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - | |
Cmo14g02040 | 347 | Gene3D | - | 135 | 265 | - | - | |
Cmo14g02040 | 347 | MobiDBLite | consensus disorder prediction | 252 | 347 | - | - | |
Cmo14g02040 | 347 | MobiDBLite | consensus disorder prediction | 276 | 307 | - | - | |
Cmo14g02040 | 347 | MobiDBLite | consensus disorder prediction | 323 | 347 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g01022 | Cmo-Chr2:6215634 | Cmo14g02040 | Cmo-Chr14:14913849 | 1.48E-81 | dispersed | |
Cmo06g00770 | Cmo-Chr6:4004220 | Cmo14g02040 | Cmo-Chr14:14913849 | 2.53E-76 | dispersed | |
Cmo14g02040 | Cmo-Chr14:14913849 | Cmo18g01215 | Cmo-Chr18:12076006 | 3.83E-88 | dispersed | |
Cmo14g02040 | Cmo-Chr14:14913849 | Cmo15g01234 | Cmo-Chr15:8497053 | 2.62E-99 | wgd | |
Cmo14g02040 | Cmo-Chr14:14913849 | Cmo16g01081 | Cmo-Chr16:7648276 | 1.36E-87 | wgd | |
Cmo14g02040 | Cmo-Chr14:14913849 | Cmo06g01158 | Cmo-Chr6:8884280 | 6.00E-179 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g02040 | - | - | csv:101212918 | 541.576 |