Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g02083 ATGGATTTATCTTGTCATATTTGGAAGCAAAATGTGTTATGTGGTAGTGAAAGAACGCATTGCAAGACGTTGGATCAGTTTGGCCTCAGATATGTGCTTAGAAGTAGAGCTCTTGATGCCAAGTTGAGTGGTGGTTCAAGAGTAATTTATAAGGTGCCTAATAACAGAAACAGAATTGTATCTTCTAGCGATTCCATTCACTTGAGTCTGGTTTGTGGTAGCAAGTTTGATGGTGCCTTGCAAATTTCTAAGCACAAGCGATTCTTGAACTGTAACTATAATGGTAGAAAGATGGGGATGGTTCATTCAGAGTGTCAAAGCAACGATTCTTTAGCATTTATTGATGGAAATGGCAGAAATATGGAATATGTAGATACTGGTGATGAAGGATCCAGTTCTGTGCCTACTGATGGTGTAGGGTCAGCTGGTTCCAGAGAAGCCGGTGGAGAAGCAGAAGCAGTAGAAACGGTTGCACCAACTGTTGATGAGCTTAGAGAATTGCTGCAAAAGGCTATAAAAGAACTGGAAGTTGCAAGACTTAACAGTACCATGTTCGAGGAGAAGGCCCAGAAAATATCAGAAACAGCAATAGCTTTGCAAGATGAAGCAACCCATGCTAGGAATGATGTGAACTCTACTCTTGATTCTGTACAACAGATAGTGAAGGAAGAATATGCTGCCAAAGAAGCTGTTCAAAAAGCTACCATGGCTCTTTCATTAGCAGAGGCAAGGCTTCAGGTGGCAATAGAGTCAATGGAGCTGGCAAAAGGAGGAAATGATTTTCCGGAAACATCAATAAATAGTGAGGGGGAGATTGATGGCAAGGATGAGCAAGAAGTGTTGTTAGTTGCTCAGGAGGACATCAAAGAATGCCGGGCAAATTTGGAAAATTGTGATGCGGAATTGAAGCGCTTACAGAGTAAAAAGGAAGAGTTACAGAAGGAAGTGGACCGGTTGAATGAGTTGGCTGAAAAGGCACAATTGAATGCGTTGAAAGCTGAAGAAGATGTCGCAAATATAATGCTTTTGGCTGAGCAAGCTGTTGCTTTTGAACTTGAGGCTGCCCAAAGGGTTAGTGATGCTGAAATAGCTTTACAGAAAGTGGAGAAATCCTTGTCAAGTTCTTTTGTCGACACTTCGGAAATCACACAGGGGTTAAATGTTATTGAAGAAGTTGAGAATGAGGATAATAAGGCAGTTCCAGAAATATCTGGTGATATTGCTGTTGAAATGGATAGAGATTTACCACTTAGTGGTGATTCCTTAGTTATTAAATCTCTACCAGGTAGCTTTTCAGATTCTGAAGACTCTGATCAACCATATTACTTAAGTGATAGCGAGAATGGAAGATTGAGTTCAGACTCCTCTAAAGAGGTTGAATCTGGAGCAGAGAAGTCTATTTTGAGTCAAGCAAAAAAGCCGGAAACACAGAAGGATTTGACCAGAGAAGGCTCACCTGTAAATTCCCCAAAGGCTCTATTGAAAAAATCTTCTCGCTTTTTTTCAGCATCATTCTTTTCCTTTGCAGTTGATGGGACAGAGTTCACTCCAGCATTAGTCTTCCAGGGTTTCCTGGATTCCACGAAAAAGCAATTGCCAAAGCTAGTTGTTGGAGCAGTACTATTCGGAGCAGGGATTGCTATCTTAGGAAATCGAGCAGAAAGGAATTCTCTTATGTTTCAGCAGCCTGATGTTGTCACTACTAGCACGGATGAAGTTTCCTTGAATACAAAGCCTTTATTTCAACAATTAAGGAAACTTCCTAAAAGAGTGAAAAAGTTAATTGCAAAGCTTCCCCATCAAGAGGTGAATGAAGAGGAGGCTTCACTGTTAGATGTGTTATGGCTGTTGCTTGCTAGTGTTATATTTGTACCAACATTTCAGAAACTTCCTGGAGGAAGTCCTGTCCTTGGATACTTGGCTGCTGGCATTTTAATTGGGCCATATGGTCTCTCCATAATTCGTCACGTGCATGGAACAAAAGCAATTGCTGAATTTGGAGTTGTTTTTCTCCTGTTCAACATTGGCCTGGAGCTATCAGTTGAGAGGCTAAGTTCCATGAAGAAATATGTATTTGGGTTAGGGTCTGCACAGGTTTTGGTTACAGCTGTGGTGGTTGGCTTGGTTGCTCATATTGTCTGTGGGCAGGCTGGCCCAGCTGCAATTGTCATTGGAAATGGATTGGCTTTGTCATCCACTGCTGTTGTCCTTCAGGTGTTGCAAGAGCGAGGTGAGAGCACTTCACGGCATGGGCGTGCCACATTTTCTGTCTTACTATTCCAGGATTTGGCTGTGGTGGTTTTGCTGATTCTCATACCTCTAATTTCACCTAATTCATCCAAAGGAGGGATTGGTTTTCAAGCCATTGCTGAAGCTCTCGGCCTGGCTGCTGTTAAGGCAATAGTTGCCATTTCTGCCATAATAGCTGGTGGGCGCCTGCTACTACGACCAATTTATAAACAAATAGCTGAAAATCAAAATGCAGAAATATTCTCTGCCAACACTCTACTTGTCATTCTGGGAACAAGTCTACTTACTGCCAGGGCCGGACTATCAATGGCACTGGGTGCCTTTCTAGCAGGTTTACTGCTAGCAGAAACGGAATTCTCCTTGCAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTATTGGGTCTCTTCTTCATGACGGTTGGGATGTCTATCGATCCAAAACTTCTTCTATCTAACTTTCCAGTTATCATGGGATCTTTGGGACTTCTTATTGGTGGCAAGACTATATTGGTTGCCTTGGTTGGTAGACTTTTTGGCGTCTCAATTATATCTGCGTTAAGAGTTGGGCTGCTTCTTGCTCCTGGTGGAGAATTTGCTTTTGTGGCGTTTGGTGAAGCTGTCAATCAGGGTATTATGTCTTCTCAACTATCCTCTTTATTATTTCTTGTTGTGGGAATTTCAATGGCCCTTACGCCGTGGCTGGCTGCTGGTGGTCAGTTAATTGCTTCTCGGTTTGAGCAGCATGATGTTCGGAGTTTATTGCCTGTTGAAAGTGAGACTGATGATTTACAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGTCAGATAATTGCCCAGCTTCTGTCAGAGCGACTGATTCCTTTTGTTGCCCTTGATGTGAGGAGTGATAGAGTGGCTGTAGGACGTGCCTTAGACCTTCCTGTGTATTTTGGAGATGCAGGAAGTCGAGAGGTAAAGAATTTCATATGA 3231 42.43 MDLSCHIWKQNVLCGSERTHCKTLDQFGLRYVLRSRALDAKLSGGSRVIYKVPNNRNRIVSSSDSIHLSLVCGSKFDGALQISKHKRFLNCNYNGRKMGMVHSECQSNDSLAFIDGNGRNMEYVDTGDEGSSSVPTDGVGSAGSREAGGEAEAVETVAPTVDELRELLQKAIKELEVARLNSTMFEEKAQKISETAIALQDEATHARNDVNSTLDSVQQIVKEEYAAKEAVQKATMALSLAEARLQVAIESMELAKGGNDFPETSINSEGEIDGKDEQEVLLVAQEDIKECRANLENCDAELKRLQSKKEELQKEVDRLNELAEKAQLNALKAEEDVANIMLLAEQAVAFELEAAQRVSDAEIALQKVEKSLSSSFVDTSEITQGLNVIEEVENEDNKAVPEISGDIAVEMDRDLPLSGDSLVIKSLPGSFSDSEDSDQPYYLSDSENGRLSSDSSKEVESGAEKSILSQAKKPETQKDLTREGSPVNSPKALLKKSSRFFSASFFSFAVDGTEFTPALVFQGFLDSTKKQLPKLVVGAVLFGAGIAILGNRAERNSLMFQQPDVVTTSTDEVSLNTKPLFQQLRKLPKRVKKLIAKLPHQEVNEEEASLLDVLWLLLASVIFVPTFQKLPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHIVCGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGLAAVKAIVAISAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVIMGSLGLLIGGKTILVALVGRLFGVSIISALRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVKNFI 1076
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 15133237 15145658 - CmoCh14G020830.1 Cmo14g02083 397349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g02083 1076 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1015 1071 IPR036291 -
Cmo14g02083 1076 Pfam Sodium/hydrogen exchanger family 616 986 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cmo14g02083 1076 MobiDBLite consensus disorder prediction 428 450 - -
Cmo14g02083 1076 ProSiteProfiles RCK N-terminal domain profile. 1018 1076 IPR003148 GO:0006813
Cmo14g02083 1076 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 1 1072 - -
Cmo14g02083 1076 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 617 897 IPR004771 GO:0006812|GO:0008324|GO:0016021
Cmo14g02083 1076 Gene3D - 1014 1073 - -
Cmo14g02083 1076 Gene3D - 606 994 IPR038770 -
Cmo14g02083 1076 MobiDBLite consensus disorder prediction 428 490 - -
Cmo14g02083 1076 MobiDBLite consensus disorder prediction 125 150 - -
Cmo14g02083 1076 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1 1072 - -
Cmo14g02083 1076 Coils Coil 161 181 - -
Cmo14g02083 1076 Pfam TrkA-N domain 1019 1072 IPR003148 GO:0006813
Cmo14g02083 1076 Coils Coil 281 336 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01120 Cmo14g02083 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01447 Cmo-Chr11:10182273 Cmo14g02083 Cmo-Chr14:15133237 1.38E-80 dispersed
Cmo14g02083 Cmo-Chr14:15133237 Cmo19g00518 Cmo-Chr19:6093556 2.32E-86 dispersed
Cmo14g02083 Cmo-Chr14:15133237 Cmo06g01120 Cmo-Chr6:8619829 1.71E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g02083 - - cmo:103483290 1728.76