Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g02120 | ATGTCAATTTATGATGCTGCATTTGTGAACACGGAGCTCGCTAAACCGACCTCGATTTTCGGCCTTCGTCTTTGGGTTGTAATCGGAATCTTAGTCGGAGCCCTAATAGTTCTCGCACTGTTTCTTCTTTCACTCTGCCTCACTTCTCGCAAGCGGAACCGCCATAAGAACCAAATCCGTTTCCCTAAGTCCACAACCGACCATTCTCCTCCCGCCGTTTCGAAGGAGATCCAGGAAATCGTCCACCACGCCGTGCCGGATCATCACCACCATGTGCAGCCGGAAATTCATGTCGAGATTGGAAAATTGGAGCATCGGGTTGTTTTCTCCGATAGACCCTCTAGTGGTGAGAGTAGAGGCGCTGTGAGTGAAAATGCTTCTTTTGGATCTGTTACTGTTGGTCCTGAGGTTTCACACCTGGGTTGGGGCAGATGGTATACTCTGAGAGAGCTCGAGGCGGCCACTAATTGCTTGTGTGAAGAGAATGTGATTGGAGAAGGTGGATATGGAATCGTGTATTTAGGCATTTTAGGAGATGGTACCAGAATTGCTATCAAGAACCTCTTGAATAACAGGGGTCAAGCTGAGAGGGAATTCAAAGTCGAAGTGGAAGCAATTGGACGTGTAAGACACAAGAATCTTGTCAGGTTGCTGGGATATTGCGTTGAGGGTGCATATAGAATGCTTGTTTATGAGTACATCAACAATGGCAATCTAGACCAATGGCTTCATGGCGATGTTGGGGATATTAGCCCTTTGACGTGGGAGATTCGTGTTAACATCATAGTTGGAACAGCAAAGGGATTAGCATATCTTCACGAAGGTCTTGAACCAAAGGTTGTCCATCGTGATGTAAAATCAAGCAACATACTTCTTGATCGTCAGTGGAATGCTAAAGTATCTGATTTTGGGCTGGCCAAGCTTCTTTGTTCTGAAAGAAGCTATGTGACAACTCGTGTAATGGGCACATTTGGCTATGTTGCACCTGAGTACGCCTGCACTGGGATGTTGAATGAAAAGAGTGATGTTTATAGCTTTGGAATTCTAGTTATGGAGATAATTTCAGGGCGGATCCCTGTTGATTATAGTAGACCTCAAGAAGAGGTAAATTTGGTGGATTGGTTGAAAGCAATGGTTGGAGACAGAAAATCTGAGGAAGTGGTTGACCCCAAGTTGCCAGATAAGCCTCCTTCCAAAGCTCTCAAACGGGTTTTGTTGGTTGCTCTTCGCTGTGTTGATCCTGATGCTACGAAGAGGCCGAAAATGGGACATGTCATCCACATGCTTGAGGCAGATAATTTGCTGTCTCATGATGAACACCGGGTCGGTAAGAATTCTTCTCATTCGGTTCAAGGCCATCAACATGAGAACCGGGTCATTCCAAGACAAGTTAACAACCCGAAGTATGAAGGTGCATCTTCTAATGTAAGTGAAGGTGACAATGGAAACTTCAACATGAAAATTTGTTTATGCGCTTCAGCTGCATCACATCTCCAGATAGGTTGCTTTTCTAAACTTAACTCTTGTGTCATTGTACATCTAAAATTACACCCTTTTATTATGGAGAACGTTGGTCCTGTCAATTGTTTGGTCAAGCACCTAACCAGCTTTGTTGGTGGAATTGCAAGTTTGGTGGAGACATCTCCAACTGCATCTTCGCCTTCATGTGCTCTTTTGCTCTGTTCTGACTGGACCAGCGAGGCCAAGATGTGGACTAGAATGGAGGCATTCGACATCGAAAACATGACGGGGTTTTGTCCGATCTTCACGTTAGGCCGCCCAAAGTTTCCTCCTAAGCTGGCTGTGGATGCTTCTGAAGGGATCAGATCAATCCTTTGGTTTATCTTCCACCATACATTGTCTTTTCAAGCACTCTGTCAAACTGAATGTCTTTGGGAAGCTCCTTCAAAACCCCTTATCCAAAGCCTTGCTTTTGGAGAATGTTTGGTGTCGATTTCTGAAGGATTTTTTAATTTGTTCTGCTCTAAACGGATTGTTCTTCGTAGATGTACGAATTGTTCGTGTTATATAATGAGCAAACCGCAAGAGCCGCACCGGCCTTTCTTTCATTTTGGGAATCCTTTCCGTGCAATATCGCCAAAGGGTTCAAAATTGTCTTCTAGACTTGTTTTTCTTTTAGCCACTTTTGAGGATTCCTTGGCACAGAAGCTGAGAAAGCTTACTCCTAAATCGGATCATGACGTATTTAGCTTCTTATGGATGGGATTAGCAATGAAGCTGCTGTGTGAAATTCACAATGATGTAAAAACTCTTATAGGAGATCTTGAGCTCCCTGTATCTGACTGGGGTGAGAAATGGCTAGATGAGTACCTGGACATCAGTGTGAAATTACTTGATATATGCAATGATTTTAGCTCTGATCTCTCACAGTTGAATCAGGGTCATCTGATACTTCGGTGTGCCCTGCACAATCTGGCTTCTACATCTTCCAACCAGTTTGTTCCGGCCCGTTCTTCGTTAGATGCATGGAATCAACATATTAGTTCCAGAACCTCCAGAGTTGAGAACCGTTCTCCTATTATGGACCATTTTGAGGAATTACTTGATCTTCCGAAGGTCAAGAACTCACCCAAAGGCAAGGTTTTGATGCAAGTGATGTACGGAGTGAAGGTGGCAACTTTGTTTATTTGCAGTGTTTTTGCTTATGCCTTCTCCGGTTCTTCCAAAAGGCTGTTATCCATCAATGTTCCGGATACATACAGATGGGCACAAGCGTTTATTGAATTACAGAAAAATGTAAATATGGGAATTAAAATAAATCATTCCAGTGGAAGGTTTACTGCGTTGAGAGATCTTAATGCAGTTGATGAGCGTGTAAAAAAACTGCACTCTATGATTCAAGAAAATATTGATGGTGGCATGAAAGTGGAAGAATGTCAAAATTTGATTGTAGATTTGAGGAGCGAGGCAGAAAAGCTTACACAAGGTGTTGATCATCTTACAAAACAAGTTGATGAGTTTTTTTACATTGTTTTATCTGGACGTGATGCATTGCTTTCAAATCTTAGATCAAGTGAAACAGTATTTGATCAGGGAATGGAGGCGCTGTCTACAAGGCAACCGTGA | 3087 | 43.12 | MSIYDAAFVNTELAKPTSIFGLRLWVVIGILVGALIVLALFLLSLCLTSRKRNRHKNQIRFPKSTTDHSPPAVSKEIQEIVHHAVPDHHHHVQPEIHVEIGKLEHRVVFSDRPSSGESRGAVSENASFGSVTVGPEVSHLGWGRWYTLRELEAATNCLCEENVIGEGGYGIVYLGILGDGTRIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYINNGNLDQWLHGDVGDISPLTWEIRVNIIVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILVMEIISGRIPVDYSRPQEEVNLVDWLKAMVGDRKSEEVVDPKLPDKPPSKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADNLLSHDEHRVGKNSSHSVQGHQHENRVIPRQVNNPKYEGASSNVSEGDNGNFNMKICLCASAASHLQIGCFSKLNSCVIVHLKLHPFIMENVGPVNCLVKHLTSFVGGIASLVETSPTASSPSCALLLCSDWTSEAKMWTRMEAFDIENMTGFCPIFTLGRPKFPPKLAVDASEGIRSILWFIFHHTLSFQALCQTECLWEAPSKPLIQSLAFGECLVSISEGFFNLFCSKRIVLRRCTNCSCYIMSKPQEPHRPFFHFGNPFRAISPKGSKLSSRLVFLLATFEDSLAQKLRKLTPKSDHDVFSFLWMGLAMKLLCEIHNDVKTLIGDLELPVSDWGEKWLDEYLDISVKLLDICNDFSSDLSQLNQGHLILRCALHNLASTSSNQFVPARSSLDAWNQHISSRTSRVENRSPIMDHFEELLDLPKVKNSPKGKVLMQVMYGVKVATLFICSVFAYAFSGSSKRLLSINVPDTYRWAQAFIELQKNVNMGIKINHSSGRFTALRDLNAVDERVKKLHSMIQENIDGGMKVEECQNLIVDLRSEAEKLTQGVDHLTKQVDEFFYIVLSGRDALLSNLRSSETVFDQGMEALSTRQP | 1028 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 15315376 | 15323890 | - | CmoCh14G021200.1 | Cmo14g02120 | 397386 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g02120 | 1028 | ProSiteProfiles | Protein kinase domain profile. | 158 | 435 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo14g02120 | 1028 | Gene3D | Transferase(Phosphotransferase) domain 1 | 234 | 446 | - | - | |
Cmo14g02120 | 1028 | SMART | serkin_6 | 158 | 429 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo14g02120 | 1028 | CDD | STKc_IRAK | 164 | 430 | - | - | |
Cmo14g02120 | 1028 | Pfam | Protein BPS1 | 770 | 987 | IPR004320 | GO:0048364|GO:0048367 | |
Cmo14g02120 | 1028 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 280 | 292 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo14g02120 | 1028 | SUPERFAMILY | Protein kinase-like (PK-like) | 136 | 430 | IPR011009 | - | |
Cmo14g02120 | 1028 | Coils | Coil | 963 | 990 | - | - | |
Cmo14g02120 | 1028 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 2 | 446 | - | - | |
Cmo14g02120 | 1028 | PANTHER | OS01G0323000 PROTEIN | 2 | 446 | - | - | |
Cmo14g02120 | 1028 | Gene3D | Phosphorylase Kinase; domain 1 | 139 | 233 | - | - | |
Cmo14g02120 | 1028 | ProSitePatterns | Protein kinases ATP-binding region signature. | 164 | 186 | IPR017441 | GO:0005524 | |
Cmo14g02120 | 1028 | Pfam | Protein tyrosine and serine/threonine kinase | 161 | 429 | IPR001245 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo05g00173 | Cmo-Chr5:747084 | Cmo14g02120 | Cmo-Chr14:15315376 | 0 | dispersed | |
Cmo07g00711 | Cmo-Chr7:3210008 | Cmo14g02120 | Cmo-Chr14:15315376 | 0 | dispersed | |
Cmo08g00497 | Cmo-Chr8:3093453 | Cmo14g02120 | Cmo-Chr14:15315376 | 5.85E-13 | dispersed | |
Cmo08g00861 | Cmo-Chr8:5563946 | Cmo14g02120 | Cmo-Chr14:15315376 | 9.55E-120 | dispersed | |
Cmo11g01125 | Cmo-Chr11:6343141 | Cmo14g02120 | Cmo-Chr14:15315376 | 6.30E-167 | dispersed | |
Cmo14g02120 | Cmo-Chr14:15315376 | Cmo19g01111 | Cmo-Chr19:9447468 | 1.29E-166 | dispersed | |
Cmo17g00428 | Cmo-Chr17:2857120 | Cmo14g02120 | Cmo-Chr14:15315376 | 1.17E-122 | dispersed | |
Cmo17g00949 | Cmo-Chr17:8413387 | Cmo14g02120 | Cmo-Chr14:15315376 | 1.30E-16 | dispersed | |
Cmo06g01104 | Cmo-Chr6:8497268 | Cmo14g02120 | Cmo-Chr14:15315376 | 0 | transposed | |
Cmo14g02120 | Cmo-Chr14:15315376 | Cmo16g00107 | Cmo-Chr16:490741 | 1.17E-78 | wgd | |
Cmo14g02120 | Cmo-Chr14:15315376 | Cmo18g01299 | Cmo-Chr18:12480770 | 3.93E-43 | wgd | |
Cmo14g02120 | Cmo-Chr14:15315376 | Cmo06g01103 | Cmo-Chr6:8492897 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74886 | PF07714 | PK_Tyr_Ser-Thr | 2.80E-44 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g02120 | - | - | csv:101219288 | 865.914 |