Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g02120 ATGTCAATTTATGATGCTGCATTTGTGAACACGGAGCTCGCTAAACCGACCTCGATTTTCGGCCTTCGTCTTTGGGTTGTAATCGGAATCTTAGTCGGAGCCCTAATAGTTCTCGCACTGTTTCTTCTTTCACTCTGCCTCACTTCTCGCAAGCGGAACCGCCATAAGAACCAAATCCGTTTCCCTAAGTCCACAACCGACCATTCTCCTCCCGCCGTTTCGAAGGAGATCCAGGAAATCGTCCACCACGCCGTGCCGGATCATCACCACCATGTGCAGCCGGAAATTCATGTCGAGATTGGAAAATTGGAGCATCGGGTTGTTTTCTCCGATAGACCCTCTAGTGGTGAGAGTAGAGGCGCTGTGAGTGAAAATGCTTCTTTTGGATCTGTTACTGTTGGTCCTGAGGTTTCACACCTGGGTTGGGGCAGATGGTATACTCTGAGAGAGCTCGAGGCGGCCACTAATTGCTTGTGTGAAGAGAATGTGATTGGAGAAGGTGGATATGGAATCGTGTATTTAGGCATTTTAGGAGATGGTACCAGAATTGCTATCAAGAACCTCTTGAATAACAGGGGTCAAGCTGAGAGGGAATTCAAAGTCGAAGTGGAAGCAATTGGACGTGTAAGACACAAGAATCTTGTCAGGTTGCTGGGATATTGCGTTGAGGGTGCATATAGAATGCTTGTTTATGAGTACATCAACAATGGCAATCTAGACCAATGGCTTCATGGCGATGTTGGGGATATTAGCCCTTTGACGTGGGAGATTCGTGTTAACATCATAGTTGGAACAGCAAAGGGATTAGCATATCTTCACGAAGGTCTTGAACCAAAGGTTGTCCATCGTGATGTAAAATCAAGCAACATACTTCTTGATCGTCAGTGGAATGCTAAAGTATCTGATTTTGGGCTGGCCAAGCTTCTTTGTTCTGAAAGAAGCTATGTGACAACTCGTGTAATGGGCACATTTGGCTATGTTGCACCTGAGTACGCCTGCACTGGGATGTTGAATGAAAAGAGTGATGTTTATAGCTTTGGAATTCTAGTTATGGAGATAATTTCAGGGCGGATCCCTGTTGATTATAGTAGACCTCAAGAAGAGGTAAATTTGGTGGATTGGTTGAAAGCAATGGTTGGAGACAGAAAATCTGAGGAAGTGGTTGACCCCAAGTTGCCAGATAAGCCTCCTTCCAAAGCTCTCAAACGGGTTTTGTTGGTTGCTCTTCGCTGTGTTGATCCTGATGCTACGAAGAGGCCGAAAATGGGACATGTCATCCACATGCTTGAGGCAGATAATTTGCTGTCTCATGATGAACACCGGGTCGGTAAGAATTCTTCTCATTCGGTTCAAGGCCATCAACATGAGAACCGGGTCATTCCAAGACAAGTTAACAACCCGAAGTATGAAGGTGCATCTTCTAATGTAAGTGAAGGTGACAATGGAAACTTCAACATGAAAATTTGTTTATGCGCTTCAGCTGCATCACATCTCCAGATAGGTTGCTTTTCTAAACTTAACTCTTGTGTCATTGTACATCTAAAATTACACCCTTTTATTATGGAGAACGTTGGTCCTGTCAATTGTTTGGTCAAGCACCTAACCAGCTTTGTTGGTGGAATTGCAAGTTTGGTGGAGACATCTCCAACTGCATCTTCGCCTTCATGTGCTCTTTTGCTCTGTTCTGACTGGACCAGCGAGGCCAAGATGTGGACTAGAATGGAGGCATTCGACATCGAAAACATGACGGGGTTTTGTCCGATCTTCACGTTAGGCCGCCCAAAGTTTCCTCCTAAGCTGGCTGTGGATGCTTCTGAAGGGATCAGATCAATCCTTTGGTTTATCTTCCACCATACATTGTCTTTTCAAGCACTCTGTCAAACTGAATGTCTTTGGGAAGCTCCTTCAAAACCCCTTATCCAAAGCCTTGCTTTTGGAGAATGTTTGGTGTCGATTTCTGAAGGATTTTTTAATTTGTTCTGCTCTAAACGGATTGTTCTTCGTAGATGTACGAATTGTTCGTGTTATATAATGAGCAAACCGCAAGAGCCGCACCGGCCTTTCTTTCATTTTGGGAATCCTTTCCGTGCAATATCGCCAAAGGGTTCAAAATTGTCTTCTAGACTTGTTTTTCTTTTAGCCACTTTTGAGGATTCCTTGGCACAGAAGCTGAGAAAGCTTACTCCTAAATCGGATCATGACGTATTTAGCTTCTTATGGATGGGATTAGCAATGAAGCTGCTGTGTGAAATTCACAATGATGTAAAAACTCTTATAGGAGATCTTGAGCTCCCTGTATCTGACTGGGGTGAGAAATGGCTAGATGAGTACCTGGACATCAGTGTGAAATTACTTGATATATGCAATGATTTTAGCTCTGATCTCTCACAGTTGAATCAGGGTCATCTGATACTTCGGTGTGCCCTGCACAATCTGGCTTCTACATCTTCCAACCAGTTTGTTCCGGCCCGTTCTTCGTTAGATGCATGGAATCAACATATTAGTTCCAGAACCTCCAGAGTTGAGAACCGTTCTCCTATTATGGACCATTTTGAGGAATTACTTGATCTTCCGAAGGTCAAGAACTCACCCAAAGGCAAGGTTTTGATGCAAGTGATGTACGGAGTGAAGGTGGCAACTTTGTTTATTTGCAGTGTTTTTGCTTATGCCTTCTCCGGTTCTTCCAAAAGGCTGTTATCCATCAATGTTCCGGATACATACAGATGGGCACAAGCGTTTATTGAATTACAGAAAAATGTAAATATGGGAATTAAAATAAATCATTCCAGTGGAAGGTTTACTGCGTTGAGAGATCTTAATGCAGTTGATGAGCGTGTAAAAAAACTGCACTCTATGATTCAAGAAAATATTGATGGTGGCATGAAAGTGGAAGAATGTCAAAATTTGATTGTAGATTTGAGGAGCGAGGCAGAAAAGCTTACACAAGGTGTTGATCATCTTACAAAACAAGTTGATGAGTTTTTTTACATTGTTTTATCTGGACGTGATGCATTGCTTTCAAATCTTAGATCAAGTGAAACAGTATTTGATCAGGGAATGGAGGCGCTGTCTACAAGGCAACCGTGA 3087 43.12 MSIYDAAFVNTELAKPTSIFGLRLWVVIGILVGALIVLALFLLSLCLTSRKRNRHKNQIRFPKSTTDHSPPAVSKEIQEIVHHAVPDHHHHVQPEIHVEIGKLEHRVVFSDRPSSGESRGAVSENASFGSVTVGPEVSHLGWGRWYTLRELEAATNCLCEENVIGEGGYGIVYLGILGDGTRIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYINNGNLDQWLHGDVGDISPLTWEIRVNIIVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILVMEIISGRIPVDYSRPQEEVNLVDWLKAMVGDRKSEEVVDPKLPDKPPSKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADNLLSHDEHRVGKNSSHSVQGHQHENRVIPRQVNNPKYEGASSNVSEGDNGNFNMKICLCASAASHLQIGCFSKLNSCVIVHLKLHPFIMENVGPVNCLVKHLTSFVGGIASLVETSPTASSPSCALLLCSDWTSEAKMWTRMEAFDIENMTGFCPIFTLGRPKFPPKLAVDASEGIRSILWFIFHHTLSFQALCQTECLWEAPSKPLIQSLAFGECLVSISEGFFNLFCSKRIVLRRCTNCSCYIMSKPQEPHRPFFHFGNPFRAISPKGSKLSSRLVFLLATFEDSLAQKLRKLTPKSDHDVFSFLWMGLAMKLLCEIHNDVKTLIGDLELPVSDWGEKWLDEYLDISVKLLDICNDFSSDLSQLNQGHLILRCALHNLASTSSNQFVPARSSLDAWNQHISSRTSRVENRSPIMDHFEELLDLPKVKNSPKGKVLMQVMYGVKVATLFICSVFAYAFSGSSKRLLSINVPDTYRWAQAFIELQKNVNMGIKINHSSGRFTALRDLNAVDERVKKLHSMIQENIDGGMKVEECQNLIVDLRSEAEKLTQGVDHLTKQVDEFFYIVLSGRDALLSNLRSSETVFDQGMEALSTRQP 1028
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 15315376 15323890 - CmoCh14G021200.1 Cmo14g02120 397386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g02120 1028 ProSiteProfiles Protein kinase domain profile. 158 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g02120 1028 Gene3D Transferase(Phosphotransferase) domain 1 234 446 - -
Cmo14g02120 1028 SMART serkin_6 158 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g02120 1028 CDD STKc_IRAK 164 430 - -
Cmo14g02120 1028 Pfam Protein BPS1 770 987 IPR004320 GO:0048364|GO:0048367
Cmo14g02120 1028 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Cmo14g02120 1028 SUPERFAMILY Protein kinase-like (PK-like) 136 430 IPR011009 -
Cmo14g02120 1028 Coils Coil 963 990 - -
Cmo14g02120 1028 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 446 - -
Cmo14g02120 1028 PANTHER OS01G0323000 PROTEIN 2 446 - -
Cmo14g02120 1028 Gene3D Phosphorylase Kinase; domain 1 139 233 - -
Cmo14g02120 1028 ProSitePatterns Protein kinases ATP-binding region signature. 164 186 IPR017441 GO:0005524
Cmo14g02120 1028 Pfam Protein tyrosine and serine/threonine kinase 161 429 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00173 Cmo-Chr5:747084 Cmo14g02120 Cmo-Chr14:15315376 0 dispersed
Cmo07g00711 Cmo-Chr7:3210008 Cmo14g02120 Cmo-Chr14:15315376 0 dispersed
Cmo08g00497 Cmo-Chr8:3093453 Cmo14g02120 Cmo-Chr14:15315376 5.85E-13 dispersed
Cmo08g00861 Cmo-Chr8:5563946 Cmo14g02120 Cmo-Chr14:15315376 9.55E-120 dispersed
Cmo11g01125 Cmo-Chr11:6343141 Cmo14g02120 Cmo-Chr14:15315376 6.30E-167 dispersed
Cmo14g02120 Cmo-Chr14:15315376 Cmo19g01111 Cmo-Chr19:9447468 1.29E-166 dispersed
Cmo17g00428 Cmo-Chr17:2857120 Cmo14g02120 Cmo-Chr14:15315376 1.17E-122 dispersed
Cmo17g00949 Cmo-Chr17:8413387 Cmo14g02120 Cmo-Chr14:15315376 1.30E-16 dispersed
Cmo06g01104 Cmo-Chr6:8497268 Cmo14g02120 Cmo-Chr14:15315376 0 transposed
Cmo14g02120 Cmo-Chr14:15315376 Cmo16g00107 Cmo-Chr16:490741 1.17E-78 wgd
Cmo14g02120 Cmo-Chr14:15315376 Cmo18g01299 Cmo-Chr18:12480770 3.93E-43 wgd
Cmo14g02120 Cmo-Chr14:15315376 Cmo06g01103 Cmo-Chr6:8492897 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74886 PF07714 PK_Tyr_Ser-Thr 2.80E-44 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g02120 - - csv:101219288 865.914