Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g02126 ATGAAAATGGAAGTCGATTGGGATCTTCACGCCGTCGTCAGAGGCTACTCCGCCGTGTCCTCCGCCGCCACCATTCCCTCTTCCGACTTTTACTCTGTTTCTTCCACTTCTAATAACTCTACCCCTTTTGCTTTTGGTAGAGACCTAACCAACCAAACAAACCATTTCTTCTCCCTTCAAGATCCATTCGAAGGGCCTAATTGTAATTCCACTGAAGAATTGCATGAGCTTTTCAAACCCTTTTCCCCTAAACCTCTACCTTCTCCGCCGCCACCGCCACCGTCTGCTCCGCTGCTGCTTTCTTCTCCGGCGGCTAAGATTTTGACCCATCAGAAGCAACGGCAGAACACCCATGTCCCCAAACAGCTCCATTCAGCCCCTGTTTCTGCGTCAAGATCTAAACGCCGGAAGAATCAGCTGAAGAAAGTCTGTCAAGTTCCGGCGGAGTCTCTGTCTTCGGATATTTGGGCTTGGCGGAAATATGGCCAAAAACCCATTAAAGGATCTCCATATCCAAGGGGATATTACAGATGTAGCAGTTCCAAGGGTTGCATGGCCCGGAAACAAGTCGAGCGGAACAGATCCGACCCGGGAATGTTCATAGTCACATACACGGCGGAGCACAACCACCCAGCGCCGACTCACCGGAATTCTCTCGCCGGCTCTACCCGTCAAAAGCCCAACACGCAAACGCCGGCTTCCTCCGGATCCGAAAAACCCGACTCGAAGCAGCCCGTTTGCTCGTCGGAAGACCAAAGTACGATCACAGAGAGTAAAGAAGAGAAAGAGGAATTGTTAGCCGAAGATGAAGAAGACGACGATCTGGGTGTCTCCGATTTGATCGTGAACGACGATTTCTATATGGGTTTTGAAGAACTCGACAGCCCAATCACCGACGAGTGTTTTTCCGATCAATTTCCGGCGAATTTCGAGCTTCCATGGTCGTTCAACGGAGACCCAGACAGCGAAATTGTAAAACTCCCCTGGTAA 990 50.51 MKMEVDWDLHAVVRGYSAVSSAATIPSSDFYSVSSTSNNSTPFAFGRDLTNQTNHFFSLQDPFEGPNCNSTEELHELFKPFSPKPLPSPPPPPPSAPLLLSSPAAKILTHQKQRQNTHVPKQLHSAPVSASRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCMARKQVERNRSDPGMFIVTYTAEHNHPAPTHRNSLAGSTRQKPNTQTPASSGSEKPDSKQPVCSSEDQSTITESKEEKEELLAEDEEDDDLGVSDLIVNDDFYMGFEELDSPITDECFSDQFPANFELPWSFNGDPDSEIVKLPW 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 15377304 15378580 + CmoCh14G021260.1 Cmo14g02126 397392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g02126 329 ProSiteProfiles WRKY domain profile. 147 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cmo14g02126 329 MobiDBLite consensus disorder prediction 207 276 - -
Cmo14g02126 329 SUPERFAMILY WRKY DNA-binding domain 150 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cmo14g02126 329 MobiDBLite consensus disorder prediction 82 99 - -
Cmo14g02126 329 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 3 309 - -
Cmo14g02126 329 SMART WRKY_cls 152 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cmo14g02126 329 Gene3D WRKY domain 136 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cmo14g02126 329 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 309 IPR044810 GO:0003700
Cmo14g02126 329 MobiDBLite consensus disorder prediction 106 129 - -
Cmo14g02126 329 MobiDBLite consensus disorder prediction 79 144 - -
Cmo14g02126 329 MobiDBLite consensus disorder prediction 210 253 - -
Cmo14g02126 329 Pfam WRKY DNA -binding domain 154 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00768 Cmo-Chr4:3846274 Cmo14g02126 Cmo-Chr14:15377304 1.30E-41 dispersed
Cmo07g00048 Cmo-Chr7:306947 Cmo14g02126 Cmo-Chr14:15377304 2.29E-43 dispersed
Cmo14g02126 Cmo-Chr14:15377304 Cmo18g00508 Cmo-Chr18:3605353 1.40E-44 dispersed
Cmo14g02126 Cmo-Chr14:15377304 Cmo15g01124 Cmo-Chr15:7806671 1.61E-47 wgd
Cmo14g02126 Cmo-Chr14:15377304 Cmo02g01102 Cmo-Chr2:6677813 9.19E-32 wgd
Cmo14g02126 Cmo-Chr14:15377304 Cmo06g01113 Cmo-Chr6:8571167 1.64E-157 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11092 PF03106 WRKY 4.30E-25 CL0274 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g02126 K13425 - csv:101217082 473.396