Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g02185 ATGGAGTCTCTTGATACTGCTGCCGAGAAGGATCCAACCGGTCGATACGTTCGGTTCGATGAAATCGTGGGAAGGGGCGCTTTCAAGACAGTTTACAAGGCATTTGACGAAATTGATGGCATTGAAGTTGCCTGGAACCAAGTAAGGATTGATGGTTTCCTGCAGTCTCCTGAGGATTTGGAAAAGTTGTACTCCGAAGTACTTTTACTTAAATCATTAAGACATGAGAACATTATCAAGTTCTACAATTCTTGGGTGGATGATAAGAAGAAAACAGTCAACATTATTACTGAGCTCTTCACATCTGGGAATTTGAGACAATACCGTAAGAAGCACAAACATGTTAATATGAAGGCCATAAAGAATTGGGCGCGACAGATTCTCCGAGGCCTGGACTATCTTCACAGTCACAATCCTCCCATTATTCATAGAGATTTGAAAGGTGATAATATTTTTATTAATGGGAATCATGGAGAAGTTAAGATTGGAGATCTTGGATTAGCTATTATTTTGAAGCAGCCTACTGCTCGAAGTGTGATTGGAACTCCTGAGTTCATGGCTCCTGAGCTTTATGAAGAGGAGTACAATGAGCTTATTGATGTATATGCTTTTGGGATGTGCATGCTGGAGATGGTTACGTTTGAGTATCCTTATAGTGAATGTAAAAATCCGGCTCAGATCTTCAAGAAAGTTACATCTGGTATTAAACCTGCTTCCCTTGATAAGGTGAGTGATCCACAAACCAAGGAGTTCATCAATAAATGTTTGGTTCCGGTGCAAGATAGGTTGTCTGCAAAAGAGCTGCTTAAAGATTCATTCCTTCAAGTTGAGAACCCCAAGGAATCAACGCATGATCTCCTACAGTTACCTAACCATGTTCCTAAATCAATAAATTTGCCAAAGAGTGAACCTATTGACATTGACCTCAAACAACATTCTATGACCACCAGTGCTGAAAGCAATAGTGGGAGTCCACTGTTTCCAGACATGGAATTCCAGACTATGAACAAGAACAATGAGTTTAGGTTACGTGGAAATAAAACCGACGACAACTCGGTGGTGTTAACCTTGCGTATTGCAGACTCGAACGGTCGAGTGAGGAATATACATTTTACGTTTTATCTTGATTCTGATACTGCACTATCAGTGGCAGCTGAAATGGCTGAACAATTGGAGTTGGAAAATCATGATGTTGATTTCGTAGCTGAACTTATTGACTTATTGATAACAAAACTGGTACCTGGTTGGAAGCCGATGTTTGATTATTCCTTAAATGGAGAGTTAAGTCTTTGTGGCGGCCCCCCTACCCTTTTAAGTGCCAAATCATCTATTGCATCTCCATGGGATTCAATGTTAAATGGGGTGGATGATGGTCTGCAATCTAATGGAGATGGTGGCTGGGCTGATGATATTCCCGGTAGTCAAATTTTTGATACTTGCCCTTCTTCTCCCAGCTTCGCTAAGTTTGAGGACCTGAGTTCTCATACTTCATTCGCATCAGAGTTATTGGTCAAAGACTGTTCGACCAAAAGTGCTAAGGTGATGGATTGTTCGAATATTGTTGATGGAAGCTCAAAGGGGTCGAGCTGGTCGGCAGCGGAACTAGAGCTCCAAGGTGCATCAGATGTTGGAAAGTTGAATCCCATGGATTATTTTGTGAAGAACTCAGTGATGTCGTTGGCAAATGAAGCAGCAGCTAATGTGATGAGCTTGACGAGCAGTTGCTCTTCGCTATCCTTAACGGACAAGGATCTGGATGCCGAACTGGAGATGGAACTTGATGCTATTGAGAGACATTATCAGCAGCTGGTGGAGGAGCTGTCTCGAATGAGAGAGGAGGCAGTAGAGGCCACCAGAAAGAGATGGATTGCAAAGAAGAAGCTGACTCATTGA 1893 42.16 MESLDTAAEKDPTGRYVRFDEIVGRGAFKTVYKAFDEIDGIEVAWNQVRIDGFLQSPEDLEKLYSEVLLLKSLRHENIIKFYNSWVDDKKKTVNIITELFTSGNLRQYRKKHKHVNMKAIKNWARQILRGLDYLHSHNPPIIHRDLKGDNIFINGNHGEVKIGDLGLAIILKQPTARSVIGTPEFMAPELYEEEYNELIDVYAFGMCMLEMVTFEYPYSECKNPAQIFKKVTSGIKPASLDKVSDPQTKEFINKCLVPVQDRLSAKELLKDSFLQVENPKESTHDLLQLPNHVPKSINLPKSEPIDIDLKQHSMTTSAESNSGSPLFPDMEFQTMNKNNEFRLRGNKTDDNSVVLTLRIADSNGRVRNIHFTFYLDSDTALSVAAEMAEQLELENHDVDFVAELIDLLITKLVPGWKPMFDYSLNGELSLCGGPPTLLSAKSSIASPWDSMLNGVDDGLQSNGDGGWADDIPGSQIFDTCPSSPSFAKFEDLSSHTSFASELLVKDCSTKSAKVMDCSNIVDGSSKGSSWSAAELELQGASDVGKLNPMDYFVKNSVMSLANEAAANVMSLTSSCSSLSLTDKDLDAELEMELDAIERHYQQLVEELSRMREEAVEATRKRWIAKKKLTH 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 15627030 15629834 + CmoCh14G021850.1 Cmo14g02185 397451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g02185 630 Coils Coil 586 620 - -
Cmo14g02185 630 CDD STKc_WNK 15 274 - -
Cmo14g02185 630 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Cmo14g02185 630 Gene3D Transferase(Phosphotransferase) domain 1 100 280 - -
Cmo14g02185 630 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g02185 630 SMART serkin_6 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g02185 630 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 628 - -
Cmo14g02185 630 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 355 409 IPR024678 GO:0004674|GO:0005524
Cmo14g02185 630 ProSiteProfiles Protein kinase domain profile. 17 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g02185 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Cmo14g02185 630 Gene3D - 351 421 - -
Cmo14g02185 630 PANTHER KINASE DOMAIN PROTEIN 4 628 - -
Cmo14g02185 630 SUPERFAMILY Protein kinase-like (PK-like) 18 320 IPR011009 -
Cmo14g02185 630 CDD bZIP 583 613 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g02185 Cmo-Chr14:15627030 Cmo02g00946 Cmo-Chr2:5781968 0 dispersed
Cmo14g02185 Cmo-Chr14:15627030 Cmo15g01376 Cmo-Chr15:9374276 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74888 PF00069 Pkinase 1.60E-52 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g02185 K08867 - csv:101204101 1001.12