Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g02202 ATGAACGTGAAAACTCCGGCGACGAGGACTCGTGTTGGGAAGTACGAGCTCGGCAAAACCCTCGGCGAAGGCACTTTTGCTAAGGTCAAGTTCGCGAAGAATGTTGAGAATGGTGATTATGTCGCCATCAAGATTCTCGACCGGGAGCAAGTTCTTCGCCACAAGATGGTCGAACAGATTAAAAGAGAGATATCGACTCTGAAAGTTATCAAGCATCCGAACGTTGCTAAGATTTATGAGGTTATGGCAAGCAAATCAAAAATCTACATTGTTCTTGAGTTTGTGGATGGAGGCGAGCTTTTTGACAAAATAGCCGCAAAGGGAAGGCTCAAAGAGGATGAGGCAAGGAAATATTTCCAGCAACTTATTAATGCTGTAGATTACTGCCATAGTAGAGGAGTGTACCATCGAGATCTGAAGAAACTGAACTTAGCGTTTTCAATTAAAATGGTGGTGTTTACTTTATTGCTCTGTCTGCTTTTGCAGCCTGAAAATCTTCTTTTAGATTCACATGATGTTCTTAAGGTGTCAGATTTTGGATTGAGTGCATTTTCACAGCAAGGGGATGGTCTTCTTCACACTGCCTGTGGGACCCCAAACTATGTAGCTCCCGAGGTGTGCATATATGCTTCTTATTTCGATTATCCATTTGGGAGGATTTTGTATTTTGGTATCAGAATAAAGATTGTGAATTATAATTGTACAAAATGTGTGCTAAGTTTTGCCTTTGATTTGGATATACTACGTCAGGTCTTCAACGATAAAGGTTATGATGGTACATCATCTGATATTTGGTCATGCGGGGTCATTCTCTTTGTTCTTATGGCTGGCTTCTTGCCTTTTGACGAGCCAAATCTGATGTGTTTGTATACAAAAATTTCGAAGGCTGATTTCTGCTTTCCATCATGGTTCTCAAATGGCGCTAAAAAACTTGTTCGCCGCATTCTTGATCCCCACCCTCTTACTCGAATAACGATAGCCGAAATTCAAGAAGATGCATGGTTCAAGAAGGGCTACACACCTGCTCAATTTGAAGTGGAAGAGGATATAACTCTCGATGATGTAGATGCCGCTTTTAGCAGCTCGAGGGAACATCTTGTGACAGAAAGAAAAGAGAAGCCAATGTCCATGAACGCTTTTGAGCTCATCTCTAGGTCACCTGGTTTCAGTCTTGAAAATCTATTTGAGAAGCAGAAGACTGTTACAAAGAGAGAAACCCGTTTTACTTCGCAAAGTCCTGCAAACGAGATCATGTCGAAGATTGAAGAAACGGCGAAACCAATGGGGTTCAATGTACGAAAACGGGACTACAAGATGAAGTTACAAGGTGACAAGACTGGGAGGAAAGGACACCTCTCCATAGCTACTGAGGTGTTTGAGGTGGCACCTTCCTTGCATATGGTGGAGCTTCGGAAGACGAGTGGCGATACGCTCGAGTTTCACAAGGCACGTCAATCATTCTACAAAAGTTTCTCTTCAGGATTGAAAGACATTGTGTGGAGAACTGATGAAAATACTGTTGAAGGGAGCTGA 1533 42.4 MNVKTPATRTRVGKYELGKTLGEGTFAKVKFAKNVENGDYVAIKILDREQVLRHKMVEQIKREISTLKVIKHPNVAKIYEVMASKSKIYIVLEFVDGGELFDKIAAKGRLKEDEARKYFQQLINAVDYCHSRGVYHRDLKKLNLAFSIKMVVFTLLLCLLLQPENLLLDSHDVLKVSDFGLSAFSQQGDGLLHTACGTPNYVAPEVCIYASYFDYPFGRILYFGIRIKIVNYNCTKCVLSFAFDLDILRQVFNDKGYDGTSSDIWSCGVILFVLMAGFLPFDEPNLMCLYTKISKADFCFPSWFSNGAKKLVRRILDPHPLTRITIAEIQEDAWFKKGYTPAQFEVEEDITLDDVDAAFSSSREHLVTERKEKPMSMNAFELISRSPGFSLENLFEKQKTVTKRETRFTSQSPANEIMSKIEETAKPMGFNVRKRDYKMKLQGDKTGRKGHLSIATEVFEVAPSLHMVELRKTSGDTLEFHKARQSFYKSFSSGLKDIVWRTDENTVEGS 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 15688817 15694185 + CmoCh14G022020.1 Cmo14g02202 397468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g02202 510 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 7 146 - -
Cmo14g02202 510 Gene3D Kinase associated domain 1, KA1 371 501 - -
Cmo14g02202 510 ProSiteProfiles NAF domain profile. 372 396 IPR018451 GO:0007165
Cmo14g02202 510 SUPERFAMILY Protein kinase-like (PK-like) 11 348 IPR011009 -
Cmo14g02202 510 CDD CIPK_C 378 497 - -
Cmo14g02202 510 Pfam NAF domain 374 434 IPR004041 GO:0007165
Cmo14g02202 510 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Cmo14g02202 510 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 161 207 - -
Cmo14g02202 510 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 250 503 - -
Cmo14g02202 510 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Cmo14g02202 510 ProSiteProfiles Protein kinase domain profile. 15 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g02202 510 SMART serkin_6 15 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g02202 510 Pfam Protein kinase domain 161 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g02202 510 Pfam Protein kinase domain 253 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g02202 510 Pfam Protein kinase domain 15 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g02202 510 Gene3D Transferase(Phosphotransferase) domain 1 95 360 - -
Cmo14g02202 510 PANTHER - 161 207 - -
Cmo14g02202 510 PANTHER - 7 146 - -
Cmo14g02202 510 PANTHER - 250 503 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g01011 Cmo14g02202 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00546 Cmo-Chr13:6316667 Cmo14g02202 Cmo-Chr14:15688817 0 dispersed
Cmo14g02202 Cmo-Chr14:15688817 Cmo07g01272 Cmo-Chr7:6994481 1.90E-151 dispersed
Cmo14g02202 Cmo-Chr14:15688817 Cmo06g01011 Cmo-Chr6:7945376 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74889 PF00069 Pkinase 1.40E-35 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g02202 - - csv:101203531 788.104