Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g02228 ATGGATAAAGTCGAGTTGAGCGGTGTGTACGACGACGCCATGGATATGGACTTGGACTTGGACCTGGACTTGGTCTTGGATGAAGATGATCGGACAAAGAGGAAGAAAATCAAGAATCAGACAGTGGACATGGAGATGAAACATATTCACCACGCCGACGAAGATGGATCACACAAGCTTTTCCCGAAACAGGCGCTTAGTGTTCTGCTTGTTGAAGCTGATGATTCTACTCGCCGGATCATCGCCGCGCTTCTTCGTAAATGCAGTTACAGAGTCTATGCTGTTCCTGATGGACTGAAGGCATGGGAATGTTTGAAGGGAAGACCGCATAATGTTGATCTCATACTTACTGAAGTGGATTTGCCATCAATATCTGGTTATGCACTACTAACGTTAGTCATGGAGCACGACATTTGCAAAAATATTCCTGTTATAATGATGTCATCTTGCGACGCAGTTAGCATGGTCTTGAAGTGTATGTTAAAAGGTGCGGCTGATTTTCTTATTAAGCCAATTAGAAAAAATGAGCTCAAGAACCTTTGGCAGCATGTTTGGAGAAGGCACACGAAGATTAGTGGGAAATTTCCCTCCTATTTAACTGTTGGACAGCGTGAAGTTGTGGCCACTTCTGATAATGATGAAGGTAGCAATTATTCAAGTTACTGTGTGGCTTCTAGAAAGAAAATTAAGGAATGCAGTGAGAAGGGAAGTGATGCCCAGAGCTCTTGTACAACACCTTACTTGGAAGCTGAGAATAGATGCATGCCAAATATGCAGGGTCTGTCACCACTGAAGGATGGGACTGCTCCAAAGCTAAATATGAGTTGTAAGAAACGTGGATTTGGTGCTTATATGGACAAAGAATTTGACATACTTAAAACCAACATCAGAGATAAGTCGGATAATGCGGCCAAAAGTGAAGCTTGCAATTCAGTTCCTTCAAGAATGAAAGAAGATTGTGTTATTGCAGAAATAAGAAGCCAGAATAAAGTTTTGAGGCCTGACTTTTACAAGGTCGTCGATGATGGTGCTTCTGAGATGTTTAGTTACAACAATAAGGACACTGAACCTTCCAGTAGAATCAACGACTTGATAGGAAATTTTGACAATAATCTGAAGCACATCAATAGCATCTGCAAGTTTGATGAACATCAAAAGTGCAGGTTATCGAGCTCCAACGATGCCAGCGCAATCAAATTAGAATTTTCTCCTCAGTTGGAGCTTTCTTTAAGAAGAATTTCCCCGGCCAAACCAGAAGGCCAGTGGAGCGAAAATGGGCATGTTCTGAACCACTCCAATGCTTCAGCCTTTTCATCGTACAATAGCTGTAAGATGATGAAACCCCCTTCTGTGACACAACCCAATGCCCCTACTGAATCAGACACAAGTGCTGGTCAATCTCCTAGACCATTGCCAAGTCTACTGTCAGGAATTTCGGGTTGTACACACCAAGACCATGGGGTTCCAGTAAGAAACAGTCGGAAGAATATGACCCCAAAGGTTGCTGGCGGGTTTGACCAGGCTGAACATCAAATTCTGCAACCACAACTTGATCTTTTTCCAGCTCCAGATTTGGTATCTGATAAGGCTCCCGCTGGTCGTGTTCTCCATTCCATGTTCTACACGCCATCAGTCTTGCCTCGAGTACCTAATACCAGATCAACATGTGAACAAGAGGTGTCTCCCATTTCTATTGATATCTCATTCCATAACTGTCGTGATATTTCCAACGCGAGAAAAGTTGGTCATCAATATGTAGAAAACACAGATAATACTATTGAACGAGTGGCAGAGGAGTTGAAACATGACTCTCCTAGTGCTGCTACACATAGTGCCAGTAGTAGCTTATGCAATGAAACGGATCATATTAATAGCAACACGAATGGGAGCATTTGCAACCAAACAGAAGGCAACACCTCGTCAAGTGTAGCGGATGACAAGACTGCAGCCTCTGAAAATATGAATGCATCCAATGTCTTTACCTATGAAGGAAGTAAAGGACTGGATTCTTCTCGTTCCAGGCATAGGGAAGCCGCTCTGGAGAAGTTCAGGTTGAAACGGAAAGGTCGTTGTTATGAGAAAAAGGTCAGATATCAAAGCCGGAAAAGATTGGCAGAGCAGCGACCGCGAGTTAAAGGACAATTTGTTCGTCAACGGCCTAGTGACCCACCAGCCTCGGACTCTGGATGTCGATGA 2196 43.49 MDKVELSGVYDDAMDMDLDLDLDLVLDEDDRTKRKKIKNQTVDMEMKHIHHADEDGSHKLFPKQALSVLLVEADDSTRRIIAALLRKCSYRVYAVPDGLKAWECLKGRPHNVDLILTEVDLPSISGYALLTLVMEHDICKNIPVIMMSSCDAVSMVLKCMLKGAADFLIKPIRKNELKNLWQHVWRRHTKISGKFPSYLTVGQREVVATSDNDEGSNYSSYCVASRKKIKECSEKGSDAQSSCTTPYLEAENRCMPNMQGLSPLKDGTAPKLNMSCKKRGFGAYMDKEFDILKTNIRDKSDNAAKSEACNSVPSRMKEDCVIAEIRSQNKVLRPDFYKVVDDGASEMFSYNNKDTEPSSRINDLIGNFDNNLKHINSICKFDEHQKCRLSSSNDASAIKLEFSPQLELSLRRISPAKPEGQWSENGHVLNHSNASAFSSYNSCKMMKPPSVTQPNAPTESDTSAGQSPRPLPSLLSGISGCTHQDHGVPVRNSRKNMTPKVAGGFDQAEHQILQPQLDLFPAPDLVSDKAPAGRVLHSMFYTPSVLPRVPNTRSTCEQEVSPISIDISFHNCRDISNARKVGHQYVENTDNTIERVAEELKHDSPSAATHSASSSLCNETDHINSNTNGSICNQTEGNTSSSVADDKTAASENMNASNVFTYEGSKGLDSSRSRHREAALEKFRLKRKGRCYEKKVRYQSRKRLAEQRPRVKGQFVRQRPSDPPASDSGCR 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 15799629 15804962 - CmoCh14G022280.1 Cmo14g02228 397494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g02228 731 MobiDBLite consensus disorder prediction 445 495 - -
Cmo14g02228 731 SUPERFAMILY CheY-like 66 191 IPR011006 -
Cmo14g02228 731 MobiDBLite consensus disorder prediction 699 715 - -
Cmo14g02228 731 CDD psREC_PRR 68 171 - -
Cmo14g02228 731 MobiDBLite consensus disorder prediction 628 647 - -
Cmo14g02228 731 MobiDBLite consensus disorder prediction 445 480 - -
Cmo14g02228 731 Gene3D - 67 225 - -
Cmo14g02228 731 ProSiteProfiles CCT domain profile. 676 718 IPR010402 GO:0005515
Cmo14g02228 731 MobiDBLite consensus disorder prediction 601 620 - -
Cmo14g02228 731 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR5 34 709 - -
Cmo14g02228 731 MobiDBLite consensus disorder prediction 699 731 - -
Cmo14g02228 731 MobiDBLite consensus disorder prediction 606 620 - -
Cmo14g02228 731 SMART REC_2 66 181 IPR001789 GO:0000160
Cmo14g02228 731 PANTHER TWO-COMPONENT RESPONSE REGULATOR 34 709 IPR045279 GO:0009736
Cmo14g02228 731 ProSiteProfiles Response regulatory domain profile. 67 185 IPR001789 GO:0000160
Cmo14g02228 731 Pfam CCT motif 676 718 IPR010402 GO:0005515
Cmo14g02228 731 Pfam Response regulator receiver domain 68 179 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00476 Cmo-Chr3:5175369 Cmo14g02228 Cmo-Chr14:15799629 8.21E-18 dispersed
Cmo07g00992 Cmo-Chr7:4870674 Cmo14g02228 Cmo-Chr14:15799629 5.04E-49 dispersed
Cmo11g00182 Cmo-Chr11:877863 Cmo14g02228 Cmo-Chr14:15799629 2.64E-13 dispersed
Cmo14g02228 Cmo-Chr14:15799629 Cmo15g01055 Cmo-Chr15:6845235 3.28E-84 dispersed
Cmo14g02228 Cmo-Chr14:15799629 Cmo02g01182 Cmo-Chr2:7085038 1.28E-104 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11103 PF00072 Response_reg 7.80E-19 CL0304 Cmo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g02228 K12130 - qsu:112004762 541.962