Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00075 ATGGGTATGTGTAATGAGAAACTTGTGGGCTTTTTGAACAATAGGTGGTTGGTTTTTGTGGCTGCAATATGGGTTCAATCTTGCGCGGGAATCGGGTATCTTTTTGGAAGCATATCGCCGGTGATCAAAACCAATTTGAGTTACAGTCAGAGGCAAATTGCGCGGCTCGGTGTGGCGAAAGACCTTGGGGATAGTGTTGGTACTCTAGCTGGAACCTTGTTGGAGATATTGCCCTTCTGGGCAACTCTGTTGGTCGGTGCTATCAGTAACTTTGTCGGGTATGGTTGGATTTGGCTCATCGTCACTGGTCGAGCTCCCGTTTTGCCTCTCTGGGCTATGTGCGTTCTTGTATTTGTGGGAACGAATGGGGAGACTTACTTCAATACAGTTTCTCTGGTTTCTTGCGTACAAAACTTTCCAAAAAGCAGGGGTCCTGTGGTTGGGATTTTGAAAGGCTTTGCTGGTTTAAGCGGTGCAATCTTGACTCAGATATATGCAATCATGCATTCTCCTGATTCAGCCGATCTTATATTCATGATTGCAGTAGGTCCTGCACTGGTGGCTATTGGCTTGATGTTTTTTATCAAACCTGTTGCCGGCCATAGGCAAGTGCGGCAGTCTGACGCCATGAGCTTTACTACTGTTTATGGCGTCTGCCTCCTCTTGGCTGCATATTTGATGGGAGTCATGCTTGTTGAGGATCTTGTTACCTTGAGCTCCACTGTGATAGCCATTTTTACCGCTGTTATGTTTGTCATCCTTCTTATTCCCTTCTTGATTCCGGTGGCGTCGACTTTGAGCTCAGAGACGACAACATATGCTGAGCAAGAGGCTCTCCTACAACCGTTACACAGACAGGAACCTGCTACATCTGAAGCAGATGGTAATGAAGTGATATTAAGTGAGGTGGAAGATGAAAAATCAGAGGTAGAGGACTCAGTTCCTGCATCAGAGAGACAAAAACGCATTGCTCAGTTGCAAGCAAAACTATTGCAAGCAGCTGCAGAAGGAGCAGTAAGAGTGCAGAGGAGGAAGGGTCCACGTAGAGGGGAAGATTTCACCTTGGGTCAAGCTTTAATCAAAGCAGACTTTTGGCTTATATTTCTCTCCCATCTCCTTGGTTCTGGGACTGGATTGACCGTGATCGATAACCTCGGACAGATGAGCGAGTCCTTAGGCTATGATAATACACATATTTTTGTGTCCCTCATCAGCATATGGAACTTCCTCGGCCGTGTTGGTGGTGGCTACCTCTCTGAGATTGCTGTAAGAGATTATGCTTATCCAAGACCTATTGCAATGGCGATTGCGCAACTCCTTATGATATTCGGACATCTCTTCATCGGAATGGGATGGCCTGGAGCAATGTACATTGGAACTCTCATAACAGGGCTCGGGTACGGGGCTCACTGGGCAATTGTGCCTGCTACTGCCTCTGAATTGTTTGGGTTGAAAAAGTTTGCTGCTTTATACAACTTCATCACTCTCTCTACTCCCATGGGATCTTTGATATTTTCTGGGTTAATCACGAGCAGCATCTATGATAAGGAAGCAGAGAAGCAAGCTCTCAATCATCTCTCACAGCTGCAGAGCTCCAATGGACCGCTCAAGTGCGTGGGCACCATATGCTTCTCTCTAACTTGTATGATAATGGCTGTTTTCTGCGCCATTGCAGGCATCTTAAGTTTGGTTTTGGTTCACCGCACCAGGGGTGTTTACTACAACCTCTATGGAAAATCTCGTTCATCCACGCTTTGTGTAAATTAG 1767 46.24 MGMCNEKLVGFLNNRWLVFVAAIWVQSCAGIGYLFGSISPVIKTNLSYSQRQIARLGVAKDLGDSVGTLAGTLLEILPFWATLLVGAISNFVGYGWIWLIVTGRAPVLPLWAMCVLVFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHSPDSADLIFMIAVGPALVAIGLMFFIKPVAGHRQVRQSDAMSFTTVYGVCLLLAAYLMGVMLVEDLVTLSSTVIAIFTAVMFVILLIPFLIPVASTLSSETTTYAEQEALLQPLHRQEPATSEADGNEVILSEVEDEKSEVEDSVPASERQKRIAQLQAKLLQAAAEGAVRVQRRKGPRRGEDFTLGQALIKADFWLIFLSHLLGSGTGLTVIDNLGQMSESLGYDNTHIFVSLISIWNFLGRVGGGYLSEIAVRDYAYPRPIAMAIAQLLMIFGHLFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFAALYNFITLSTPMGSLIFSGLITSSIYDKEAEKQALNHLSQLQSSNGPLKCVGTICFSLTCMIMAVFCAIAGILSLVLVHRTRGVYYNLYGKSRSSTLCVN 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 395182 397855 + CmoCh15G000750.1 Cmo15g00075 397583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00075 588 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 3 581 - -
Cmo15g00075 588 Pfam Nodulin-like 15 262 IPR010658 -
Cmo15g00075 588 CDD MFS_Mch1p_like 15 558 - -
Cmo15g00075 588 Gene3D MFS general substrate transporter like domains 364 574 IPR036259 -
Cmo15g00075 588 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 581 - -
Cmo15g00075 588 SUPERFAMILY MFS general substrate transporter 11 203 IPR036259 -
Cmo15g00075 588 SUPERFAMILY MFS general substrate transporter 212 571 IPR036259 -
Cmo15g00075 588 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Cmo15g00075 588 Coils Coil 300 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00172 Cmo-Chr1:758137 Cmo15g00075 Cmo-Chr15:395182 6.04E-115 dispersed
Cmo14g01400 Cmo-Chr14:11493196 Cmo15g00075 Cmo-Chr15:395182 1.19E-116 dispersed
Cmo15g00075 Cmo-Chr15:395182 Cmo20g00758 Cmo-Chr20:3808290 3.71E-116 dispersed
Cmo15g00075 Cmo-Chr15:395182 Cmo04g03096 Cmo-Chr4:21556380 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00075 - - csv:101211655 989.178