Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00076 ATGGCCATGGGAGCTTTGTGGAGGGCTTTGGTTCTGGCTGTGCTTCTTGTGGCGGCTACTACTGTCCAGACAACAGACGCACAATTAGTAGAGAATTTCTACGCCTCCACTTGTCCCAACGTGGAGCAGATCGTTACACAAGCTGTTCAAAACAAGTTTGATCAAACGTTCGTTACCGTCCCTGCAACTTTGCGACTCTTCTTCCATGATTGTTTCGTTGAGGGTTGTGATGCTTCGGTGTTGATAGCATCTCCAAATGGGGATGCAGAGAAAGATGCTAAAGACAATATTTCATTAGCTGGAGATGGATTTGACACGGTTATTAAAGCTAAGCAAGCGGTTGAAAGTGCTTGTCCCGGTGTTGTCTCTTGTGCTGACGTTTTGGCTCTTGCAACTAGAGATGTCGTTAATTTGGCAGGGGGCCCACTGTACAGCGTGGAACTAGGACGTCGAGATGGGCTAATTTCCCGAGCATCCCGAGTGGCCGGAAACTTACCGGAGCCATTCTTCGATCTGGACCAACTGGTCAACATGTTCGCCGCCCACAACCTGACCCTCATCGACATGATCGCACTCTCCGGAGCCCACACCTTGGGCTTCTCCCACTGTGACCGTTTCTCCAACCGTCTCTACTCCTTTTCCCCTTCGTCTCCGGTGGACCCGTCGTTGGACCCCGGCTACGCGCAGCAGCTAATGGATGCGTGTCCGCGGAACGTGGATCCCAGCATAGCCATCGACATGGATCCTATAACCCCTCGGACCTTCGACAACGTTTACTACCAGAACCTTATCGCCGGCAAGGGCCTCTTCACTGCCGACCAGATTCTGTTCACGGAGTCCGAATCCCAGCCGACAGTCCGCAGCTTCGCCACCAATGGGGCGGAGTTTAATGCTGCGTTTATCAACGCCATGACCAAGATGGGTCGGATTGGAGTTAAGACTGGTAATGATGGTGAAATTCGAATCGATTGTAGTGCCTTTAATTCCTAA 990 51.62 MAMGALWRALVLAVLLVAATTVQTTDAQLVENFYASTCPNVEQIVTQAVQNKFDQTFVTVPATLRLFFHDCFVEGCDASVLIASPNGDAEKDAKDNISLAGDGFDTVIKAKQAVESACPGVVSCADVLALATRDVVNLAGGPLYSVELGRRDGLISRASRVAGNLPEPFFDLDQLVNMFAAHNLTLIDMIALSGAHTLGFSHCDRFSNRLYSFSPSSPVDPSLDPGYAQQLMDACPRNVDPSIAIDMDPITPRTFDNVYYQNLIAGKGLFTADQILFTESESQPTVRSFATNGAEFNAAFINAMTKMGRIGVKTGNDGEIRIDCSAFNS 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 397875 399468 - CmoCh15G000760.1 Cmo15g00076 397584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00076 329 CDD secretory_peroxidase 28 327 IPR033905 GO:0004601|GO:0042744
Cmo15g00076 329 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Cmo15g00076 329 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 Gene3D - 32 328 - -
Cmo15g00076 329 PANTHER - 11 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 Gene3D Peroxidase, domain 2 166 307 - -
Cmo15g00076 329 PANTHER PEROXIDASE 11 329 - -
Cmo15g00076 329 SUPERFAMILY Heme-dependent peroxidases 28 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 Pfam Peroxidase 46 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00076 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Cmo15g00076 329 ProSiteProfiles Plant heme peroxidase family profile. 28 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01136 Cmo-Chr7:6028779 Cmo15g00076 Cmo-Chr15:397875 1.79E-142 dispersed
Cmo15g00076 Cmo-Chr15:397875 Cmo20g01019 Cmo-Chr20:6692431 3.55E-147 dispersed
Cmo18g00377 Cmo-Chr18:2451576 Cmo15g00076 Cmo-Chr15:397875 6.80E-92 dispersed
Cmo18g01236 Cmo-Chr18:12206483 Cmo15g00076 Cmo-Chr15:397875 6.16E-91 dispersed
Cmo15g00076 Cmo-Chr15:397875 Cmo04g03095 Cmo-Chr4:21554721 4.97E-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00076 K00430 - csv:101213580 550.436