Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00129 ATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGTTGTGCGGCACTGTGCTATTTCTTTAGAGTATAACGAGTCCAAGTTGGCGGCTATTATGGCATCTTTCATCATTCAAAAACCTCGGCAGAGGTCACCTTTTATCAAAGCTGCCCTAAAAACGCTTGAAAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTGGATATGTATCGTACGACAGATCAAGAGAGAGACAATATTGAACACGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAACTTGATATCCTCAAAAACAACATAAATGAGGGTGATGCTCACTCAAAGGGATGGCTTGGTTCTAGGACTGATGATTCTAATGCTGATACTATTGCACACAAACATGGGGTGCATTGGTATTCTCCAATTTTCTTATCAATTCTCAAGTCCTGGCTTCCTTCAAGGTTGTCACTGTTGGTCCTAATTTTGAGTGAGAAACTTCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATCATAAGCAAAGCAGTACCACGAAGAAAACCAAACCAAATAAATAAACCACGCTCTGCCAATACCTTTGCCTATAATGGTACAGAGCTGAGGGAACCTGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAGCAACTGTTGGATGATGAAACTCGTGCACTTCAGGTTGAGTTGACTAGTCTTCTTGACGCAGTCCAGGAAACAGAAACTAAGATGGTAGAGATGTCTGCTTTAAATCACCTCATGTCTACACACGTTTTGCAGCAAGCACAACAAATTGAATTTCTTTATGAACAGGTCAGCAGTTCTAACTCAGTTCGTTTTCTCATCACAGTATCTCTCAACTCTCAACGGCTAATTACAATTGCACCTTCCTTTTTAATATCTCTCAGAATCAAATTAAGTATTTCTCGCCAAAAGACTTACTACCCTTCTTCGAGCTATGCTTTCGCCATCAGACTTGTGGCAGATGCAACCGGGTTAAGGATTAGCGTAGACATCTGGGATATGTTTCCACGAGTTGAGATTGTTTTCACTCACAAAGTAATGAACAGTATAACCACACCCACAAGCAACGAAGTAAATGAGGGGACTTTCCCACTTATGCGCCTCTTAAAACTACAAAAGCAGAGGAACATTCCTGATCCGTCGTCCTCAAAACTCGACCTCCAACAATTTAACGCAGCTTTTCTTTCATCTCTTTTTGATCGCTGCTCCACCGGAAGATCACAGATTCATGTCCTTCTGCTTCCTCCCACTGCTCCACTTAACTCAACCCTTCATTTCTGTATCAAAAATCACAGCTTTTTGTTTTTTGATCAAAACCCACCTCCCAACATGAAGGGTACGAGTCGTTTCTTCACGATCGGCCTCGTTGCCTCCTGGTACTCCTCCAACATTGGGGTTCTCTTGCTCAACAAGTATGTGCTCAGCAACTATGGTTTCAAGTACCCCATCTTCCTCACCATGTGCCACATGACCGCTTGTTCTTTGTTCAGCTACCTTGCAATTGCTTGGTTCAAGGTCGTTCCTCTGCAAACACTTCGATCTCGCCTCCAATTCTTTAAGATCTCCGCCCTCAGCTTCATCTTCTGCATCTCCGTTGTCTTCGGCAACATTTCCCTTCGCTATCTTCCCGTCTCTTTCAACCAGGCTGTCGGAGCAACCACGCCCTTTTTCACCGCCGTTTTTGCCTATCTGATGACCTTGAAGAGGGAGGCTTGGCTCACTTATGTTACGCTCATTCCTGTCGTCACCGGAGTTATCATTGCCAGCGGGGGCGAACCCAGTTTCCATCTATTTGGGTTTCTGATATGTATCGCAGCCACCGCTGCAAGAGCTCTCAAATCAGTACTTCAAGCAATTTTGCTTTCTGCAGATGGAGAGAAGCTGAATTCCATGAATCTCCTTTTGTATATGGCCCCAATGGCTGTTGTGTTCTTGCTTCCTGCAACACTTGTTTTGGAAGATAATGTGATTGGTATCACACGGGCACTTGCTATAGATGATATCAAGATCATCTGGTACCTTCTTTTCAATTCGTCACTAGCATATTTCGTAAATCTTTCCAATTTTCTCGTCACAAAACACACCAGTGCGCTCACCCTTCAGGTTCTAGGAAATGCCAAAGGGGCAGTGGCTGTCGTTGTCTCCATTTTAATCTTTAGAAACCCCGTGTCCGTTACTGGAATGATGGGTTATACGATGACAGTTATGGGAGTCATCCTCTACAGCCAAGCAAAGAAACGAACAAATAAGAGTTAA 2319 43.34 MAKFRDRTEDFKDVVRHCAISLEYNESKLAAIMASFIIQKPRQRSPFIKAALKTLESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVTAFIKACQEQLDILKNNINEGDAHSKGWLGSRTDDSNADTIAHKHGVHWYSPIFLSILKSWLPSRLSLLVLILSEKLHSVTSQFDKLRAIRFQDIISKAVPRRKPNQINKPRSANTFAYNGTELREPDNFEHQPVRAQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQVSSSNSVRFLITVSLNSQRLITIAPSFLISLRIKLSISRQKTYYPSSSYAFAIRLVADATGLRISVDIWDMFPRVEIVFTHKVMNSITTPTSNEVNEGTFPLMRLLKLQKQRNIPDPSSSKLDLQQFNAAFLSSLFDRCSTGRSQIHVLLLPPTAPLNSTLHFCIKNHSFLFFDQNPPPNMKGTSRFFTIGLVASWYSSNIGVLLLNKYVLSNYGFKYPIFLTMCHMTACSLFSYLAIAWFKVVPLQTLRSRLQFFKISALSFIFCISVVFGNISLRYLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLICIAATAARALKSVLQAILLSADGEKLNSMNLLLYMAPMAVVFLLPATLVLEDNVIGITRALAIDDIKIIWYLLFNSSLAYFVNLSNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYTMTVMGVILYSQAKKRTNKS 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 606352 613213 + CmoCh15G001290.1 Cmo15g00129 397637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00129 772 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Cmo15g00129 772 Pfam Triose-phosphate Transporter family 476 763 IPR004853 -
Cmo15g00129 772 PANTHER - 464 769 - -
Cmo15g00129 772 PANTHER SOLUTE CARRIER FAMILY 35 464 769 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g03046 Cmo15g00129 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01445 Cmo-Chr1:11280097 Cmo15g00129 Cmo-Chr15:606352 3.67E-20 dispersed
Cmo06g00764 Cmo-Chr6:3963071 Cmo15g00129 Cmo-Chr15:606352 4.88E-132 dispersed
Cmo09g00790 Cmo-Chr9:4039012 Cmo15g00129 Cmo-Chr15:606352 6.94E-51 dispersed
Cmo14g00553 Cmo-Chr14:2812439 Cmo15g00129 Cmo-Chr15:606352 1.06E-148 dispersed
Cmo04g03046 Cmo-Chr4:21336381 Cmo15g00129 Cmo-Chr15:606352 4.14E-174 transposed
Cmo15g00129 Cmo-Chr15:606352 Cmo04g03044 Cmo-Chr4:21325284 0 wgd
Cmo15g00129 Cmo-Chr15:606352 Cmo04g01207 Cmo-Chr4:6157840 5.09E-21 wgd
Cmo15g00129 Cmo-Chr15:606352 Cmo04g00175 Cmo-Chr4:889623 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00129 - - csv:101206922 564.688