Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00161 ATGGCGGCTGGACCATCGCTCACTGCCAATTGGCTTGCCGTTTTGCTTCTGTTTGCTTCGGCGGCCTTGTCCTTGGCCCACCCACAAACACATCGCCATCAATTTATTATTCAAGCCACGCCAGTGAAGAGGCTGTGCAAAACCCACAATGCCATTACCGTGAACGGGCAGTTCCCGGGGCCGACATTGGAGGTCAATAACGGCGATACTCTCATCGTCACTGTCATCAACAAGGCCAAATACAACGTCACAATTCACTGGCACGGGATTAGGCAGCTTAGAACTGGGTGGGCGGATGGACCCGAGTTCGTGACTCAGTGCCCAATCCGACCTGGAGGAAGCTATACTTACAGATTTACGGTACAAGGACAAGAAGGGACTCTATGGTGGCATGCTCATAGCTCATGGCTTCGGGCCACTGTTTATGGCGCCTTGATCATCCGCCCTAGACGCGGAGATTCCTTCCCTTTCCCCAAACCGAACCGCGAAGCAATACTTCTAATGGGCGAATGGTGGGATGCAAACCCCATTGACGTGGTGCGACAGGCCACAAGAACAGGAGCAGCTCCTAATGTCTCCGATGCTTACACTTTCAATGGTCAACCCGGTGACTTTTACAAGTGCTCTAGCAAAGATACCGTAGTCGTGAATATAGACTCTGGCGAGACCAATCTGCTCAGGGTGGTGAACTCTGCCCTGAACCAGGCGCTATTTTTTACGGTGGCTAATCACAAACTGACGGTGGTCGGAGCCGACGCCTCGTACACAAAGCCCTTCACCACCTCTGTTCTGATGCTGGGCCCGGGCCAAACCACCGACGTTTTAATCTCCGGCAACCAGGTCCCCAACCGGTATTACATAGCGGCACGTGCGTACCAAAGCGCCCAAAACGCACCATTTGGCAATACCACCACCACGGCCATTCTCAGCTACAAATCTGCCCCTTGCGCCGCCAAGAAAGGGTGCGCGTCGATCAAACCGATCATGCCATCCCTCCCTGCATACAATGACACCGCCACCGTTACTGCCTTCAGCAAGAAATTCCGCAGCCCAAGACCGGTCCCAGTCCCGACCAAAATCGACGAGAGTCTGTTCTTCACCATCGGTTTAGGACTCAACAATTGCCCACGTAATTTCAAATCGAGCCAATGCCAAGGCCCCAACGGTACTCGTTTCACGGCCAGTATGAACAACGTGTCCTTTGTTCTTCCTTCGAATATCTCCATTCTTCAAGCCTTCCAACAGAGGATTCCCGGCGTAGTCACCCCTGATTTTCCAGCTAACCCACCGGTGAAATTCGATTACACCGGTAACGTCAGCCAGTCACTTTTTCAACCGGTTCCCGGTACTAAAGGGTACAGATTGAAATACGGGTCGAGAGTACAAGTTGTGTTGCAAGACACTAGTATCGTAACCCCCGAAAATCACCCGATCCATCTCCATGGCTACGATTTTTACATCATCGCCGAGGGATTCGGAAATTTCAACCCCAAAACCGATACCAAAAAATTCAACCTCGTTGACCCTCCTCTTAGAAACACGGTGGCCGTCCCCACCAATGGCTGGGCCGTCATCCGATTCGTCGCCGACAATCCAGGTGCTTGGATAATGCACTGTCACTTGGACGTGCATATCACGTGGGGACTGGCAATGGTGTTTCTGGTGGATAACGGAGTCGGACAGTTGCAGTCGATAGAAGCTCCCCCGCCGGATCTCCCGATATGCTAA 1728 52.55 MAAGPSLTANWLAVLLLFASAALSLAHPQTHRHQFIIQATPVKRLCKTHNAITVNGQFPGPTLEVNNGDTLIVTVINKAKYNVTIHWHGIRQLRTGWADGPEFVTQCPIRPGGSYTYRFTVQGQEGTLWWHAHSSWLRATVYGALIIRPRRGDSFPFPKPNREAILLMGEWWDANPIDVVRQATRTGAAPNVSDAYTFNGQPGDFYKCSSKDTVVVNIDSGETNLLRVVNSALNQALFFTVANHKLTVVGADASYTKPFTTSVLMLGPGQTTDVLISGNQVPNRYYIAARAYQSAQNAPFGNTTTTAILSYKSAPCAAKKGCASIKPIMPSLPAYNDTATVTAFSKKFRSPRPVPVPTKIDESLFFTIGLGLNNCPRNFKSSQCQGPNGTRFTASMNNVSFVLPSNISILQAFQQRIPGVVTPDFPANPPVKFDYTGNVSQSLFQPVPGTKGYRLKYGSRVQVVLQDTSIVTPENHPIHLHGYDFYIIAEGFGNFNPKTDTKKFNLVDPPLRNTVAVPTNGWAVIRFVADNPGAWIMHCHLDVHITWGLAMVFLVDNGVGQLQSIEAPPPDLPIC 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 740796 743101 - CmoCh15G001610.1 Cmo15g00161 397669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00161 575 SUPERFAMILY Cupredoxins 29 176 IPR008972 -
Cmo15g00161 575 ProSitePatterns Multicopper oxidases signature 1. 533 553 IPR033138 -
Cmo15g00161 575 Gene3D - 373 575 IPR008972 -
Cmo15g00161 575 PANTHER MULTI-COPPER OXIDASE 7 575 IPR045087 -
Cmo15g00161 575 CDD CuRO_3_LCC_plant 420 558 IPR034289 GO:0005507
Cmo15g00161 575 Gene3D - 17 149 IPR008972 -
Cmo15g00161 575 PANTHER LACCASE 7 575 - -
Cmo15g00161 575 SUPERFAMILY Cupredoxins 157 354 IPR008972 -
Cmo15g00161 575 Pfam Multicopper oxidase 164 313 IPR001117 -
Cmo15g00161 575 CDD CuRO_2_LCC_plant 166 311 IPR034285 -
Cmo15g00161 575 Pfam Multicopper oxidase 425 557 IPR011706 GO:0005507|GO:0016491
Cmo15g00161 575 ProSitePatterns Multicopper oxidases signature 2. 538 549 IPR002355 GO:0005507
Cmo15g00161 575 CDD CuRO_1_LCC_plant 33 149 IPR034288 GO:0005507
Cmo15g00161 575 TIGRFAM laccase: laccase 29 575 IPR017761 GO:0046274|GO:0048046|GO:0052716
Cmo15g00161 575 Pfam Multicopper oxidase 38 150 IPR011707 GO:0005507
Cmo15g00161 575 SUPERFAMILY Cupredoxins 352 575 IPR008972 -
Cmo15g00161 575 Gene3D - 159 353 IPR008972 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g03016 Cmo15g00161 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00732 Cmo-Chr1:3780434 Cmo15g00161 Cmo-Chr15:740796 0 dispersed
Cmo03g00391 Cmo-Chr3:4784379 Cmo15g00161 Cmo-Chr15:740796 0 dispersed
Cmo03g00392 Cmo-Chr3:4789429 Cmo15g00161 Cmo-Chr15:740796 4.74E-180 dispersed
Cmo10g01021 Cmo-Chr10:5361795 Cmo15g00161 Cmo-Chr15:740796 2.44E-79 dispersed
Cmo13g00023 Cmo-Chr13:185410 Cmo15g00161 Cmo-Chr15:740796 0 dispersed
Cmo15g00161 Cmo-Chr15:740796 Cmo16g00670 Cmo-Chr16:3325158 0 dispersed
Cmo15g00161 Cmo-Chr15:740796 Cmo04g03016 Cmo-Chr4:21184855 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00161 K05909 - csv:101221525 1093.57