Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00169 ATGGCTGATTCAGGATTCAGAGGAGTTTTGATTTTGAGTTTGGGTTTGGGTTTGTTTATGCTCTTTTTGGGCACTGCCTCAGCTCAACTCTCTACTGGTTTTTACTCTTCTTCTTGTCCAAATTTGTTGTCCACTGTCAAAACCTCTGTTCGATCTGCTGTCTCCAAAGAGGCTCGCATGGGGTCTTCCATTCTTCGCTTGTTTTTTCACGACTGTTTCGTCAATGGATGCGATGGGTCAATTCTGTTGGACGATACGTCGAGCTTCACTGGAGAGAAAAATGCTAACCCGAATCGGAACTCCGCTAGAGGCTTCGATGTCATTGATAACATCAAAACCGCTGTTGAGAATGCTTGCCCTGGCGTTGTTTCTTGTGCTGATATCCTCGCCATTGCTGCTCGTGACTCTGTTGTTCTTCTAGGAGGGCCGAGCTGGAATGTGAAGTTGGGTAGAAGAGACGCCACAACCGCGAGCCAGTCCCAAGCCAACAGCGACATCCCCGCGCCAACTTCAACTCTTAGCCAACTCACCTCTAGATTCAGCGCTCTCGGCCTCTCCAACACAGACTTGGTCGCTCTTTCAGGTGGGCACACAATCGGACAAGCAAGGTGCACAACATTCCGAGGTAGAATCTATAGCAATGCCACAAACATAGACAGTACATTTGCAACAACAAGGCAAGGCAATTGCCCCAGTGCCTCAGGCTCCGGCGACAACAATTTGGCTCCTCTGGATTTACAAACTCCAAATTCTTTCGACAACAATTACTTCAAGAACCTTCTTCAGAACAAGGGGCTCCTACAATCAGATCAAGTTCTCTTCAATGGCGGATCAACAGACTCCACTGTCCAAAACTACGCCAAGGCCCCTGCCCGATTCTTCTCTGATTTTGCTGCCGCCATGGTCCGGATGAGCGACATCAGTCCTCTTACTGGCTCCAATGGCGAAATTAGGAAGAACTGCCGGAAGGTTAATTAA 978 48.47 MADSGFRGVLILSLGLGLFMLFLGTASAQLSTGFYSSSCPNLLSTVKTSVRSAVSKEARMGSSILRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGFDVIDNIKTAVENACPGVVSCADILAIAARDSVVLLGGPSWNVKLGRRDATTASQSQANSDIPAPTSTLSQLTSRFSALGLSNTDLVALSGGHTIGQARCTTFRGRIYSNATNIDSTFATTRQGNCPSASGSGDNNLAPLDLQTPNSFDNNYFKNLLQNKGLLQSDQVLFNGGSTDSTVQNYAKAPARFFSDFAAAMVRMSDISPLTGSNGEIRKNCRKVN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 782241 784067 + CmoCh15G001690.1 Cmo15g00169 397677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00169 325 Coils Coil 324 325 - -
Cmo15g00169 325 CDD secretory_peroxidase 29 324 IPR033905 GO:0004601|GO:0042744
Cmo15g00169 325 ProSiteProfiles Plant heme peroxidase family profile. 29 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 Gene3D - 34 325 - -
Cmo15g00169 325 PANTHER PEROXIDASE 72-RELATED 11 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 Pfam Peroxidase 46 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 SUPERFAMILY Heme-dependent peroxidases 29 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Cmo15g00169 325 PANTHER PEROXIDASE 11 325 - -
Cmo15g00169 325 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo15g00169 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Cmo15g00169 325 Gene3D Peroxidase, domain 2 167 304 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00746 Cmo-Chr1:3874647 Cmo15g00169 Cmo-Chr15:782241 1.74E-137 dispersed
Cmo03g01001 Cmo-Chr3:7539228 Cmo15g00169 Cmo-Chr15:782241 9.81E-107 dispersed
Cmo11g01337 Cmo-Chr11:9258069 Cmo15g00169 Cmo-Chr15:782241 8.41E-136 dispersed
Cmo11g01338 Cmo-Chr11:9259436 Cmo15g00169 Cmo-Chr15:782241 8.41E-136 dispersed
Cmo11g01977 Cmo-Chr11:13592179 Cmo15g00169 Cmo-Chr15:782241 7.35E-125 dispersed
Cmo15g00169 Cmo-Chr15:782241 Cmo20g00343 Cmo-Chr20:1681636 1.96E-136 dispersed
Cmo20g00345 Cmo-Chr20:1689733 Cmo15g00169 Cmo-Chr15:782241 1.23E-116 dispersed
Cmo15g00169 Cmo-Chr15:782241 Cmo20g00342 Cmo-Chr20:1675436 9.79E-144 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00169 K00430 - csv:101218447 553.518