Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00181 ATGAGAAGGCTACTGGGGCTGTTCGTCTTGTTCGTTGTGGCTCCGGTGTTGGTGAGATCTCTGAACCCACCTCTGAACGACGACGTTTTGGGGCTGATTGTGTTCAAGGCTGACATTGAAGACCCTAAAGGGAAACTCGCGTCGTGGAATGAAGATGACGATAACCCCTGTAATTGGGTTGGTGTAAAATGCAACCCCAGATCCAATAGAGTTGTTGAGCTCGATCTTGATGGCTTCTCTCTCAATGGAAGGCTTGGCCGTGGTCTTCTTCAGCTGCAGTTTCTTCGTAAACTATCTCTTTCCAACAACAATCTTACTGGAAATTTAAGTCCCAATAATGCTCGCTTTGAAAATCTGCGAGTGGTGGATTTAAGCGGCAACAGTTTTCATGGGATGATACCGGGTGATTTCTTCCGGCAATGTGGGTCGTTGAGAGTGATCTCTTTGGCTAAGAACAAACTTTCAGGGAAAATCCCCGAAAGTTTGGGCTCTTGCGTCAGTCTTGCTGCTGTTAATTTATCTTATAATCAGTTTTCTGGTTCATTACCTTCTGGGATTTGGTCTTTGACTGGGCTTCGGTCCTTGGATTTTTCTGGTAATGTTTTGGAAGGTGAAATTCCACTGGAGGTGAAGAGTATGAATAATTTGCGAGCTATTAATTTGGGGAAGAATCGGTTTTCTGGACAGATCCCAGATGGGATTGGGAGTTGTTTGCTCTTGAGGTCTGTTGATCTCAGTGAGAATTCTTTCTCCGGCGACATTCCGGCGACAATGCAGCGGCTTAGTTTATGCAGTACTCTGAATTTAAGAAGAAACCTATTTGAAGGGAAGGTTCCTGAATGGATTGGTGAAATGGAAGGCCTTGAAATCTTGGATCTTTCAGGGAATAGATTTTCTGGTCCGGTTCCAAGTTCATTCAGGAATCTTCAGAATCTGAAGGTTTTGAATCTTTCTGAAAATGGTTTAATTGGCAGCTTGGCAGGGTCCGTACTTCCTTCTCAAAACCTTTCAGCCATAGATCTCGGCCACGGCTCTCTCACCGGTGTGCTTCCGGCCTGGATTCTGAAGCTGGGTTCTCAAAATGTATTGCCTTCTGATGTCAAAAGAAGCTCTCTTTCTACACCTGTGGGAAAAGCTCTTGTGAATCTTCAAGTGTTGGATTTGTCTCACAATGCACTTTCTGGTGAAATTTCACCTGAGATTGGGATATTAAGTAACTTGCAGGTGTTGAACCTGTGTAAGAACTCATTTGTTGGGGCTATTCCAGAGAGTGTTGGAGGCATGAAGGGCCTGGTTTTTCTTGACTTGAGTGAAAACCAGCTGAATGGAAGCATTCCCGGAACGCTCGGCGGAGACGAATCGTTGAAAGAATTGAGACTGGAGAAGAACTTGCTGGAAGGTGAAGTTCCAAATTCGATTGGGAACTGTTCTTCACTTGTAACTTTGGACATGTCGGAAAACAGGTTAAGTGGCTCCATACCAGCAGCATTGTCTCTACTGACCAATCTTCAAGTTGTGGACTTATCCGCAAACAATCTCAGTGGTGGACTGCCAAAACAGTTGGCCAATCTTCCCAACCTTCTTTTATTCAACATTTCTCACAACAATCTGCAGGGAGAACTGCCGGCAGGTGGCTTTTTCAATACAATCTCCCCTTCCTCTGTGGCTGGAAATCCTTCTCTTTGTGGTTCTATTGTCAAAAAGTCTTGCCCTGGTGTCCTTCCAAAGCCTATTGTTCTAAACCCCAACTCATCTTCTGACTCTGGTTCTCCTTCATTACCTTCAACTCTTGGTCACAAAAGAATCATTCTCAGCATCTCTGCACTCATTGCCATTGGTGCAGCTGCTGTTATCCTTGTCGGTGTAGTTGCGATCACCGTCCTTAACTTCCATGTTCGGTCATCTGCAAATCGTCCTGAAGCAGCCATCACGTTTTCTGGGGGAGATGACTTCAGCAACTCCCCAACTACAGATGCCAATTCTGGCAAGCTGGTCATGTTCTCGGGAGATCCTGACTTCAGTACCGGTGCACATGCCCTCCTTAACAAGGATTGTGAGCTTGGCCGCGGAGGATTTGGAGCGGTTTACCAGACTGTTCTTCGTGATGGGCACCCGGTTGCAATAAAAAAGCTCACAGTTTCAAGTCTTGTCAAATCTCAAGAAGAGTTTGAAAGGGAGGTTAAGAAATTGGGGAAGGTTAGACACCAAAATCTTGTGGCTCTAGAAGGTTATTACTGGACTCCATCTCTGCAGCTCCTTATATATGAATTTGTTTCTGGAGGGAGTTTGTATAAACAGCTTCATGAAGGATTGGGTGGAAACATCCTTTCATGGAATGAAAGATTTAACATAATCCTCAAAACCGCGAAAAGCTTGGCTCATTTGCACCAAATGAACATCATCCACTACAATATAAAATCAAGCAATGTTCTGATTGATGGTTCAGGCGAGCCTAAAGTTGGAGATTTTGGCCTAGCAAGGTTGTTGCCAATGCTTGATCGGTACGTGTTGAGCAGTAAGATACAGAGTGCACTTGGCTATATGGCACCCGAATTTGCCTGCAAAACAGTTAAGATAACAGAGAAATGTGATGTGTATGGATTTGGAGTTCTGGTTCTTGAGGTGGTAACGGGGAAGAGACCTGTAGAGTACATGGAAGACGATGTGGTGGTACTCTGCGACATGGTTCGGCGAGCGCTGGAAGAAGGTGGGGTGGAGGAATGCATTGATGGGAGGCTCCAGAGAAATTTCCCATCTGAGGAGGCCATACCAGTAGTGAAACTAGGATTGATATGCACCTCACAGGTGCCATCAAACCGACCTGATATGACAGAGGTTGTTAATATATTAGAGCTTATCAGATGTCCATCAGAAGGCCAAGAAGAATTGGGATAA 2895 45.01 MRRLLGLFVLFVVAPVLVRSLNPPLNDDVLGLIVFKADIEDPKGKLASWNEDDDNPCNWVGVKCNPRSNRVVELDLDGFSLNGRLGRGLLQLQFLRKLSLSNNNLTGNLSPNNARFENLRVVDLSGNSFHGMIPGDFFRQCGSLRVISLAKNKLSGKIPESLGSCVSLAAVNLSYNQFSGSLPSGIWSLTGLRSLDFSGNVLEGEIPLEVKSMNNLRAINLGKNRFSGQIPDGIGSCLLLRSVDLSENSFSGDIPATMQRLSLCSTLNLRRNLFEGKVPEWIGEMEGLEILDLSGNRFSGPVPSSFRNLQNLKVLNLSENGLIGSLAGSVLPSQNLSAIDLGHGSLTGVLPAWILKLGSQNVLPSDVKRSSLSTPVGKALVNLQVLDLSHNALSGEISPEIGILSNLQVLNLCKNSFVGAIPESVGGMKGLVFLDLSENQLNGSIPGTLGGDESLKELRLEKNLLEGEVPNSIGNCSSLVTLDMSENRLSGSIPAALSLLTNLQVVDLSANNLSGGLPKQLANLPNLLLFNISHNNLQGELPAGGFFNTISPSSVAGNPSLCGSIVKKSCPGVLPKPIVLNPNSSSDSGSPSLPSTLGHKRIILSISALIAIGAAAVILVGVVAITVLNFHVRSSANRPEAAITFSGGDDFSNSPTTDANSGKLVMFSGDPDFSTGAHALLNKDCELGRGGFGAVYQTVLRDGHPVAIKKLTVSSLVKSQEEFEREVKKLGKVRHQNLVALEGYYWTPSLQLLIYEFVSGGSLYKQLHEGLGGNILSWNERFNIILKTAKSLAHLHQMNIIHYNIKSSNVLIDGSGEPKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRRALEEGGVEECIDGRLQRNFPSEEAIPVVKLGLICTSQVPSNRPDMTEVVNILELIRCPSEGQEELG 964
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 831929 835682 - CmoCh15G001810.1 Cmo15g00181 397689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00181 964 Gene3D Transferase(Phosphotransferase) domain 1 758 962 - -
Cmo15g00181 964 SMART LRR_typ_2 213 237 IPR003591 -
Cmo15g00181 964 SMART LRR_typ_2 285 308 IPR003591 -
Cmo15g00181 964 SMART LRR_typ_2 116 140 IPR003591 -
Cmo15g00181 964 SMART LRR_typ_2 309 333 IPR003591 -
Cmo15g00181 964 SMART LRR_typ_2 500 523 IPR003591 -
Cmo15g00181 964 SMART LRR_typ_2 380 404 IPR003591 -
Cmo15g00181 964 SMART LRR_typ_2 428 451 IPR003591 -
Cmo15g00181 964 SMART LRR_typ_2 524 548 IPR003591 -
Cmo15g00181 964 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 962 - -
Cmo15g00181 964 SUPERFAMILY L domain-like 259 554 - -
Cmo15g00181 964 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
Cmo15g00181 964 Pfam Leucine rich repeat 240 298 IPR001611 GO:0005515
Cmo15g00181 964 Pfam Leucine rich repeat 405 465 IPR001611 GO:0005515
Cmo15g00181 964 Pfam Protein kinase domain 684 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g00181 964 SUPERFAMILY Protein kinase-like (PK-like) 684 954 IPR011009 -
Cmo15g00181 964 Gene3D Ribonuclease Inhibitor 26 183 IPR032675 -
Cmo15g00181 964 ProSitePatterns Protein kinases ATP-binding region signature. 687 710 IPR017441 GO:0005524
Cmo15g00181 964 ProSiteProfiles Leucine-rich repeat profile. 382 404 IPR001611 GO:0005515
Cmo15g00181 964 Gene3D Ribonuclease Inhibitor 184 281 IPR032675 -
Cmo15g00181 964 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Cmo15g00181 964 CDD STKc_IRAK 687 953 - -
Cmo15g00181 964 SUPERFAMILY L domain-like 44 359 - -
Cmo15g00181 964 Gene3D Phosphorylase Kinase; domain 1 675 757 - -
Cmo15g00181 964 Gene3D Ribonuclease Inhibitor 286 573 IPR032675 -
Cmo15g00181 964 SMART LRR_sd22_2 500 526 - -
Cmo15g00181 964 SMART LRR_sd22_2 92 121 - -
Cmo15g00181 964 SMART LRR_sd22_2 285 311 - -
Cmo15g00181 964 SMART LRR_sd22_2 189 218 - -
Cmo15g00181 964 SMART LRR_sd22_2 380 409 - -
Cmo15g00181 964 PRINTS Leucine-rich repeat signature 431 444 - -
Cmo15g00181 964 PRINTS Leucine-rich repeat signature 500 513 - -
Cmo15g00181 964 ProSiteProfiles Protein kinase domain profile. 681 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g00181 964 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 1 962 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g00101 Cmo15g00181 CCT
Cmo04g01127 Cmo15g00181 CCT
Cmo04g00101 Cmo15g00181 ECH
Cmo04g01127 Cmo15g00181 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00101 Cmo-Chr4:537599 Cmo15g00181 Cmo-Chr15:831929 0 dispersed
Cmo14g00008 Cmo-Chr14:49629 Cmo15g00181 Cmo-Chr15:831929 0 dispersed
Cmo15g00181 Cmo-Chr15:831929 Cmo03g00727 Cmo-Chr3:6230533 4.85E-69 dispersed
Cmo06g00760 Cmo-Chr6:3945531 Cmo15g00181 Cmo-Chr15:831929 3.01E-177 transposed
Cmo14g01517 Cmo-Chr14:12161482 Cmo15g00181 Cmo-Chr15:831929 0 transposed
Cmo17g00470 Cmo-Chr17:3346368 Cmo15g00181 Cmo-Chr15:831929 3.42E-16 transposed
Cmo15g00181 Cmo-Chr15:831929 Cmo04g01127 Cmo-Chr4:5753828 0 wgd
Cmo15g00181 Cmo-Chr15:831929 Cmo06g00177 Cmo-Chr6:968492 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74897 PF00069 Pkinase 4.30E-41 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00181 - - csv:101217024 1680.23