Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00209 ATGGCTTCACCTTCTCCTTCTCCGGCGGCGGAGTCTGCCATATCTTCCTCATCTCCTACATCTTCTGAGCCTAATCAGTCCGGTGAACCTCCTTCATCATCTTCTAGTTCTTCAGCTCCGCCTCCTCAGTCACCACCACCAGCAGTTTCTGATGCTCCTCCACCTTCTCCTCCATTGTTAGCATCACCACCTGCACCACCAATATCCCCTCCTTCTCCCCTTGCTGGTTCACCGTCTTCGCCTCCGCAATCTTCGCCCTCACCGCCGCCACCTTCAGCATCAACCTCCCCACCACCACATTCAGCATCCTCCTCTGCACCACCACCTTCAACATCAACCTCTGCACCACCGCCTTCAACATCAACCTCTGCACCACCGCCTTCAACATCAACCTCTGCACCTCCGCCTTCAACATCAACCTCTGCACCTCCGCCTTCAACATCGACCTCTCCACCACCGCCTTCAAGATCAACCTCTCCACCACCACGTTCATCAACATCACCACCACCTTCCTCTGCATCACCTCCTCCCCCAAAACAATCCGTTTCCTATCCTCCTCCTCCCGAAGCTTCACCTCCCCCTTCTGATTTATCACCTCCGCCGCCGACACCACCAGCAGGTGGTTCTCCCCCTCCTCTATCCAATCCTAGACCTCCATCTTCTACTCCCCCTCCCCCTGATATTATTTCACCTTCTCCTCCTCCATCAGCTAATGTCCCAACACCACCTTCATCAACAGGAGAATCACCTAAAGTATCTCCTCCATCCCACAAGGCATCTCCTCCTCCTCCTGATCATAGCTCCCCTCCACCAAGATCTACAGTACCATCGCCCCCTCCTTCTTCAGTCCCTTCATTATCTGCTCCTCCTCCAGTTAGTGATCCTGGTTTTCCAACCAATTCATCAGGGGGAAGTCCTGTTACCCCTTCAACTTCTGTTACACCAGAATGGCCAATTCCAATAATCAATGGTACCAGTGTTGCAACAAATACCCCAACCACTGGTAAAAGGGGTTTCAGCACTGGAACATTTGTGGCAGTTGGCAGCGTGGTTGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCAATTTGGTTTGTTCAGAAACGGAAGAGAAGAAAGAAGAATATCCCTTACACCGTGCCTTCTCCTTTTTCCTCCCAAAACTCAGATGCCTTTTTCCTAAGAGCCCATTCTTTTGCTAATGTGGTTGGAAGTCGAACCGATAGCGATTTCAAGTATGCGTCATCAGAAGGAGGTGGAGTAGGTAATTCAAGATCGTTTGCTTATGAAGAGCTACACCAGGCCACAAGTGGGTTTTCATTGAATAGTCTTTTGGGGGAAGGTGGATTTGGTTGTGTGTACAGAGGCACCCTTGCAGATGGACGAGATGTAGCCGTTAAACAACTTAAAGTGGGTGGTGGACAGGGAGAACGAGAGTTCAGAGCTGAAGTTGAAATTATTAGCCGAGTACACCATCGACATTTGGTTTCCCTGGTTGGTTACTGTATCTCTGACCATCAAAGATTGCTTGTCTATGACTATGTTCCAAACAATACCCTTCATTATCATCTGCACGGTGAAAACAGGACAGTTTTGGCTTGGGCTTCACGTGTTCGAATTGCTTCTGGTGCAGCCCGGGGAATCGCTTACCTACATGAAGATTGTCATCCACGCATTATTCACAGGGATATTAAATCGTCTAACATTCTGCTTGATATCAACTTCGAAGCTCAGGTCGCAGATTTCGGGCTTGCTAAATTGGCGTTGGATTCACTGACTCATGTAACGACTCGTGTTATGGGAACCTTTGGATACATGGCGCCAGAGTACGCTACAAGTGGGAAATTGACTGATAAATCTGATGTTTTCTCTTTTGGGGTTGTACTTTTGGAGTTAATTACTGGTCGCAAGTCTGTAGATTCTTCTCAGCCTTTGGGAGATGAGAGCTTAGTTGAATGGGCTCGACCGCTGCTGGCACAAGCTATTGAGGATGAGAACTTTGAAGAATTGGTGGATCCAAGGCTAGACAACAATTATGTCGACAGAGAAATGTTTCGAATGATCGAAGCAGCCGCTGCCTGCGTTCGTCATTCAGCCGTAAAGAGGCCAAGAATGAGTCAGGTGGTGAGAGCTCTAGACTCTTTAGATGAAATGTCAGATCTTTCGAATGGGGTGAAACCTGGACAGAGTGAAGTGTTTGATTCAGCTGAACATTCTGCTCAGATTAGAATGTTTCAGAGAATGGCTTTTGGCAGTCAAGATTACAGTTATGGTTACTCCGAACGAGATCGAGATCGAGATCGGAGTCGAAGTTATAGTCAAAGTCAGAGTAGCTGGAGTAGAGAATCGAGAGATCAAAGTCCATCGGTGCCTAATAATCGATCCCGGCACGTCTGA 2397 48.39 MASPSPSPAAESAISSSSPTSSEPNQSGEPPSSSSSSSAPPPQSPPPAVSDAPPPSPPLLASPPAPPISPPSPLAGSPSSPPQSSPSPPPPSASTSPPPHSASSSAPPPSTSTSAPPPSTSTSAPPPSTSTSAPPPSTSTSAPPPSTSTSPPPPSRSTSPPPRSSTSPPPSSASPPPPKQSVSYPPPPEASPPPSDLSPPPPTPPAGGSPPPLSNPRPPSSTPPPPDIISPSPPPSANVPTPPSSTGESPKVSPPSHKASPPPPDHSSPPPRSTVPSPPPSSVPSLSAPPPVSDPGFPTNSSGGSPVTPSTSVTPEWPIPIINGTSVATNTPTTGKRGFSTGTFVAVGSVVGVLVLSLVIMAIWFVQKRKRRKKNIPYTVPSPFSSQNSDAFFLRAHSFANVVGSRTDSDFKYASSEGGGVGNSRSFAYEELHQATSGFSLNSLLGEGGFGCVYRGTLADGRDVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDHQRLLVYDYVPNNTLHYHLHGENRTVLAWASRVRIASGAARGIAYLHEDCHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDSLTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLELITGRKSVDSSQPLGDESLVEWARPLLAQAIEDENFEELVDPRLDNNYVDREMFRMIEAAAACVRHSAVKRPRMSQVVRALDSLDEMSDLSNGVKPGQSEVFDSAEHSAQIRMFQRMAFGSQDYSYGYSERDRDRDRSRSYSQSQSSWSRESRDQSPSVPNNRSRHV 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1017698 1023074 - CmoCh15G002090.1 Cmo15g00209 397717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00209 798 MobiDBLite consensus disorder prediction 758 798 - -
Cmo15g00209 798 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 148 774 - -
Cmo15g00209 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 559 571 IPR008271 GO:0004672|GO:0006468
Cmo15g00209 798 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 148 774 - -
Cmo15g00209 798 MobiDBLite consensus disorder prediction 772 798 - -
Cmo15g00209 798 MobiDBLite consensus disorder prediction 1 331 - -
Cmo15g00209 798 MobiDBLite consensus disorder prediction 255 296 - -
Cmo15g00209 798 MobiDBLite consensus disorder prediction 35 241 - -
Cmo15g00209 798 ProSiteProfiles Protein kinase domain profile. 439 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g00209 798 Gene3D Transferase(Phosphotransferase) domain 1 515 732 - -
Cmo15g00209 798 SUPERFAMILY Protein kinase-like (PK-like) 422 712 IPR011009 -
Cmo15g00209 798 Gene3D Phosphorylase Kinase; domain 1 411 514 - -
Cmo15g00209 798 ProSitePatterns Protein kinases ATP-binding region signature. 445 467 IPR017441 GO:0005524
Cmo15g00209 798 Pfam Protein tyrosine and serine/threonine kinase 441 712 IPR001245 GO:0004672|GO:0006468
Cmo15g00209 798 CDD STKc_IRAK 445 715 - -
Cmo15g00209 798 MobiDBLite consensus disorder prediction 297 331 - -
Cmo15g00209 798 SMART serkin_6 439 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g00209 798 MobiDBLite consensus disorder prediction 1 34 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02967 Cmo15g00209 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00071 Cmo-Chr1:295611 Cmo15g00209 Cmo-Chr15:1017698 1.74E-97 dispersed
Cmo04g01626 Cmo-Chr4:8295235 Cmo15g00209 Cmo-Chr15:1017698 4.44E-180 dispersed
Cmo04g01815 Cmo-Chr4:9151971 Cmo15g00209 Cmo-Chr15:1017698 6.28E-171 dispersed
Cmo10g00657 Cmo-Chr10:3018920 Cmo15g00209 Cmo-Chr15:1017698 7.47E-159 dispersed
Cmo11g01885 Cmo-Chr11:13119060 Cmo15g00209 Cmo-Chr15:1017698 6.82E-73 dispersed
Cmo12g01280 Cmo-Chr12:11331888 Cmo15g00209 Cmo-Chr15:1017698 1.21E-163 dispersed
Cmo15g00209 Cmo-Chr15:1017698 Cmo18g00802 Cmo-Chr18:9482250 1.43E-164 dispersed
Cmo20g00530 Cmo-Chr20:2565634 Cmo15g00209 Cmo-Chr15:1017698 2.64E-69 dispersed
Cmo15g00209 Cmo-Chr15:1017698 Cmo18g01082 Cmo-Chr18:11371917 0 wgd
Cmo15g00209 Cmo-Chr15:1017698 Cmo04g02967 Cmo-Chr4:20986231 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74898 PF07714 PK_Tyr_Ser-Thr 7.30E-45 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00209 - - csv:101211665 837.795