Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo15g00209 | ATGGCTTCACCTTCTCCTTCTCCGGCGGCGGAGTCTGCCATATCTTCCTCATCTCCTACATCTTCTGAGCCTAATCAGTCCGGTGAACCTCCTTCATCATCTTCTAGTTCTTCAGCTCCGCCTCCTCAGTCACCACCACCAGCAGTTTCTGATGCTCCTCCACCTTCTCCTCCATTGTTAGCATCACCACCTGCACCACCAATATCCCCTCCTTCTCCCCTTGCTGGTTCACCGTCTTCGCCTCCGCAATCTTCGCCCTCACCGCCGCCACCTTCAGCATCAACCTCCCCACCACCACATTCAGCATCCTCCTCTGCACCACCACCTTCAACATCAACCTCTGCACCACCGCCTTCAACATCAACCTCTGCACCACCGCCTTCAACATCAACCTCTGCACCTCCGCCTTCAACATCAACCTCTGCACCTCCGCCTTCAACATCGACCTCTCCACCACCGCCTTCAAGATCAACCTCTCCACCACCACGTTCATCAACATCACCACCACCTTCCTCTGCATCACCTCCTCCCCCAAAACAATCCGTTTCCTATCCTCCTCCTCCCGAAGCTTCACCTCCCCCTTCTGATTTATCACCTCCGCCGCCGACACCACCAGCAGGTGGTTCTCCCCCTCCTCTATCCAATCCTAGACCTCCATCTTCTACTCCCCCTCCCCCTGATATTATTTCACCTTCTCCTCCTCCATCAGCTAATGTCCCAACACCACCTTCATCAACAGGAGAATCACCTAAAGTATCTCCTCCATCCCACAAGGCATCTCCTCCTCCTCCTGATCATAGCTCCCCTCCACCAAGATCTACAGTACCATCGCCCCCTCCTTCTTCAGTCCCTTCATTATCTGCTCCTCCTCCAGTTAGTGATCCTGGTTTTCCAACCAATTCATCAGGGGGAAGTCCTGTTACCCCTTCAACTTCTGTTACACCAGAATGGCCAATTCCAATAATCAATGGTACCAGTGTTGCAACAAATACCCCAACCACTGGTAAAAGGGGTTTCAGCACTGGAACATTTGTGGCAGTTGGCAGCGTGGTTGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCAATTTGGTTTGTTCAGAAACGGAAGAGAAGAAAGAAGAATATCCCTTACACCGTGCCTTCTCCTTTTTCCTCCCAAAACTCAGATGCCTTTTTCCTAAGAGCCCATTCTTTTGCTAATGTGGTTGGAAGTCGAACCGATAGCGATTTCAAGTATGCGTCATCAGAAGGAGGTGGAGTAGGTAATTCAAGATCGTTTGCTTATGAAGAGCTACACCAGGCCACAAGTGGGTTTTCATTGAATAGTCTTTTGGGGGAAGGTGGATTTGGTTGTGTGTACAGAGGCACCCTTGCAGATGGACGAGATGTAGCCGTTAAACAACTTAAAGTGGGTGGTGGACAGGGAGAACGAGAGTTCAGAGCTGAAGTTGAAATTATTAGCCGAGTACACCATCGACATTTGGTTTCCCTGGTTGGTTACTGTATCTCTGACCATCAAAGATTGCTTGTCTATGACTATGTTCCAAACAATACCCTTCATTATCATCTGCACGGTGAAAACAGGACAGTTTTGGCTTGGGCTTCACGTGTTCGAATTGCTTCTGGTGCAGCCCGGGGAATCGCTTACCTACATGAAGATTGTCATCCACGCATTATTCACAGGGATATTAAATCGTCTAACATTCTGCTTGATATCAACTTCGAAGCTCAGGTCGCAGATTTCGGGCTTGCTAAATTGGCGTTGGATTCACTGACTCATGTAACGACTCGTGTTATGGGAACCTTTGGATACATGGCGCCAGAGTACGCTACAAGTGGGAAATTGACTGATAAATCTGATGTTTTCTCTTTTGGGGTTGTACTTTTGGAGTTAATTACTGGTCGCAAGTCTGTAGATTCTTCTCAGCCTTTGGGAGATGAGAGCTTAGTTGAATGGGCTCGACCGCTGCTGGCACAAGCTATTGAGGATGAGAACTTTGAAGAATTGGTGGATCCAAGGCTAGACAACAATTATGTCGACAGAGAAATGTTTCGAATGATCGAAGCAGCCGCTGCCTGCGTTCGTCATTCAGCCGTAAAGAGGCCAAGAATGAGTCAGGTGGTGAGAGCTCTAGACTCTTTAGATGAAATGTCAGATCTTTCGAATGGGGTGAAACCTGGACAGAGTGAAGTGTTTGATTCAGCTGAACATTCTGCTCAGATTAGAATGTTTCAGAGAATGGCTTTTGGCAGTCAAGATTACAGTTATGGTTACTCCGAACGAGATCGAGATCGAGATCGGAGTCGAAGTTATAGTCAAAGTCAGAGTAGCTGGAGTAGAGAATCGAGAGATCAAAGTCCATCGGTGCCTAATAATCGATCCCGGCACGTCTGA | 2397 | 48.39 | MASPSPSPAAESAISSSSPTSSEPNQSGEPPSSSSSSSAPPPQSPPPAVSDAPPPSPPLLASPPAPPISPPSPLAGSPSSPPQSSPSPPPPSASTSPPPHSASSSAPPPSTSTSAPPPSTSTSAPPPSTSTSAPPPSTSTSAPPPSTSTSPPPPSRSTSPPPRSSTSPPPSSASPPPPKQSVSYPPPPEASPPPSDLSPPPPTPPAGGSPPPLSNPRPPSSTPPPPDIISPSPPPSANVPTPPSSTGESPKVSPPSHKASPPPPDHSSPPPRSTVPSPPPSSVPSLSAPPPVSDPGFPTNSSGGSPVTPSTSVTPEWPIPIINGTSVATNTPTTGKRGFSTGTFVAVGSVVGVLVLSLVIMAIWFVQKRKRRKKNIPYTVPSPFSSQNSDAFFLRAHSFANVVGSRTDSDFKYASSEGGGVGNSRSFAYEELHQATSGFSLNSLLGEGGFGCVYRGTLADGRDVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDHQRLLVYDYVPNNTLHYHLHGENRTVLAWASRVRIASGAARGIAYLHEDCHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDSLTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLELITGRKSVDSSQPLGDESLVEWARPLLAQAIEDENFEELVDPRLDNNYVDREMFRMIEAAAACVRHSAVKRPRMSQVVRALDSLDEMSDLSNGVKPGQSEVFDSAEHSAQIRMFQRMAFGSQDYSYGYSERDRDRDRSRSYSQSQSSWSRESRDQSPSVPNNRSRHV | 798 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 1017698 | 1023074 | - | CmoCh15G002090.1 | Cmo15g00209 | 397717 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo15g00209 | 798 | MobiDBLite | consensus disorder prediction | 758 | 798 | - | - | |
Cmo15g00209 | 798 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 | 148 | 774 | - | - | |
Cmo15g00209 | 798 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 559 | 571 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo15g00209 | 798 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 148 | 774 | - | - | |
Cmo15g00209 | 798 | MobiDBLite | consensus disorder prediction | 772 | 798 | - | - | |
Cmo15g00209 | 798 | MobiDBLite | consensus disorder prediction | 1 | 331 | - | - | |
Cmo15g00209 | 798 | MobiDBLite | consensus disorder prediction | 255 | 296 | - | - | |
Cmo15g00209 | 798 | MobiDBLite | consensus disorder prediction | 35 | 241 | - | - | |
Cmo15g00209 | 798 | ProSiteProfiles | Protein kinase domain profile. | 439 | 700 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo15g00209 | 798 | Gene3D | Transferase(Phosphotransferase) domain 1 | 515 | 732 | - | - | |
Cmo15g00209 | 798 | SUPERFAMILY | Protein kinase-like (PK-like) | 422 | 712 | IPR011009 | - | |
Cmo15g00209 | 798 | Gene3D | Phosphorylase Kinase; domain 1 | 411 | 514 | - | - | |
Cmo15g00209 | 798 | ProSitePatterns | Protein kinases ATP-binding region signature. | 445 | 467 | IPR017441 | GO:0005524 | |
Cmo15g00209 | 798 | Pfam | Protein tyrosine and serine/threonine kinase | 441 | 712 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo15g00209 | 798 | CDD | STKc_IRAK | 445 | 715 | - | - | |
Cmo15g00209 | 798 | MobiDBLite | consensus disorder prediction | 297 | 331 | - | - | |
Cmo15g00209 | 798 | SMART | serkin_6 | 439 | 695 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo15g00209 | 798 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g02967 | Cmo15g00209 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00071 | Cmo-Chr1:295611 | Cmo15g00209 | Cmo-Chr15:1017698 | 1.74E-97 | dispersed | |
Cmo04g01626 | Cmo-Chr4:8295235 | Cmo15g00209 | Cmo-Chr15:1017698 | 4.44E-180 | dispersed | |
Cmo04g01815 | Cmo-Chr4:9151971 | Cmo15g00209 | Cmo-Chr15:1017698 | 6.28E-171 | dispersed | |
Cmo10g00657 | Cmo-Chr10:3018920 | Cmo15g00209 | Cmo-Chr15:1017698 | 7.47E-159 | dispersed | |
Cmo11g01885 | Cmo-Chr11:13119060 | Cmo15g00209 | Cmo-Chr15:1017698 | 6.82E-73 | dispersed | |
Cmo12g01280 | Cmo-Chr12:11331888 | Cmo15g00209 | Cmo-Chr15:1017698 | 1.21E-163 | dispersed | |
Cmo15g00209 | Cmo-Chr15:1017698 | Cmo18g00802 | Cmo-Chr18:9482250 | 1.43E-164 | dispersed | |
Cmo20g00530 | Cmo-Chr20:2565634 | Cmo15g00209 | Cmo-Chr15:1017698 | 2.64E-69 | dispersed | |
Cmo15g00209 | Cmo-Chr15:1017698 | Cmo18g01082 | Cmo-Chr18:11371917 | 0 | wgd | |
Cmo15g00209 | Cmo-Chr15:1017698 | Cmo04g02967 | Cmo-Chr4:20986231 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74898 | PF07714 | PK_Tyr_Ser-Thr | 7.30E-45 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo15g00209 | - | - | csv:101211665 | 837.795 |