Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo15g00218 | ATGAAGAGAACTGAGGCTACTGCTTCTTGTCTTGTGGCTTCTTTATTGTTTTGGGCTTCTGCAATAAATGGCTTGCTATCTCCCAAAGGTGTTAACTATGAAGTTCAAGCTCTGATGGGTATAAAAGCTTCACTTCAAGATCCCCATGGCGTGCTTGAGAATTGGGATGGAGACTCTGTTGACCCATGTAGTTGGACTATGGTTACTTGCTCCCCTGACAGCCTTGTCATTGGCCTAGGGACTCCAAGTCAGAACCTGTCTGGGACTCTTTCTTCAAGCATTGGGAATTTGACAAACCTTCAAATTGTGCTGTTGCAGAACAACAATATTACGGGCCCAATCCCCCCAGAGCTTGAGAGGCTCTCAAAGCTCCAAACACTTGATCTATCAAGCAATTTCTTCACAGGGAAAATTCCTTCTTCTTTAGGCCATTTGAGAAGCCTACAGTACTTGAGGCTTAACAACAACAGTCTTTCTGGGGTAATTCCAATGTCTGTAGCTAACATGACACAGCTTGTGTTTCTCGATGTGTCTTATAATAATATCAGTGGCCCTCTCCCCAGATTTCCCAGCAAAACTTTCAACATTGTTGGAAACCCTCTGATCTGTGCAACTGGGTCCGAGGTCGGTTGCCACGGTTCAACTCTAATGCCCATGTCCATGAACTTGAACAGTACACAAACTGGTTTACCTGCTGTGAGATTGAAAAGTCATAAAATGGCCCTTACATTTGGCTTGAGCCTAGCTTGCCTATGTCTGATTGTTCTTGTATTTGGACTGTTCATATGGTGGCGAAGACGAAGCAATCGCCCGACGTTTTTCGATGTAAAAGGTAAATTGATTGGAGCATTGTACCGGTTCCAATTTAGACAACTTCAGATAGCAACAAACAACTTCAGCAGCAAGAACATACTAGGAAAGGGAGGTTTTGGAAATGTTTACAAAGGAATTCTTTCAGATGGAACGGTTGTAGCTGTTAAAAGGCTCAAGGATGGCAATGCGAGTAGAGGTGATATCCAGTTTCAGACTGAAGTCGAGATGATCAGCCTAGCCGTGCACCGTCATCTCCTCCGACTGTACGGGTTTTGCAACACACCAACCGAAAGGATTCTTGTTTACCCGTATATGTCTAATGGAAGCGTTGCATCACGTCTCAAAGGAAAACCAGTATTAGACTGGGGAACAAGGAAGAGAATTGCTATAGGAGCTTCAAGGGGATTGTTATACCTCCATGAACAATGTGACCCAAAGATCATACATAGAGACGTTAAGGCTGCAAACATATTGCTCGACGACTACTGCGAGGCTGTCGTTGGAGATTTCGGGTTGGCAAAGCTTCTCGACCACCAAGATTCACATGTCACAACTGCTGTGAGAGGCACCGTGGGTCATATAGCTCCTGAGTATCTCTCGACTGGGCAGTCATCCGAGAAAACAGACGTTTTTGGATTCGGAATTCTACTCCTTGAACTGATCACAGGGCAGAAAGCCCTTGAGTTTGGCAAAGCAGCTAATCAGAAAGGAGGCATTCTTGAATGGGTGAAGAAGATTCACCAGGAGAAGAAGCTGGAAGTGCTAGTGGACAAGGATCTGAAAGCCAACTATGACAGAGTTGAGCTAGAGGAGATGGTTCAAGTGGCTCTGTTGTGTACACAATACCAACCAGGGCACAGACCAAAGATGTCAGAAGTTGTCAGAATGCTTGAAGGAGAAGGTCTTGCTGTCAGATGGGAAGCTTCTCAGAGAGTTGACTCAACAAAGTGCAAACCTCATGATTTCTCTTCATCTGACAGATACTCTGATCTCACAGATGACTCATCCTTGTTGGTCCAAGCCATGGAGCTCTCTGGTCCAAGGTGA | 1860 | 45.05 | MKRTEATASCLVASLLFWASAINGLLSPKGVNYEVQALMGIKASLQDPHGVLENWDGDSVDPCSWTMVTCSPDSLVIGLGTPSQNLSGTLSSSIGNLTNLQIVLLQNNNITGPIPPELERLSKLQTLDLSSNFFTGKIPSSLGHLRSLQYLRLNNNSLSGVIPMSVANMTQLVFLDVSYNNISGPLPRFPSKTFNIVGNPLICATGSEVGCHGSTLMPMSMNLNSTQTGLPAVRLKSHKMALTFGLSLACLCLIVLVFGLFIWWRRRSNRPTFFDVKGKLIGALYRFQFRQLQIATNNFSSKNILGKGGFGNVYKGILSDGTVVAVKRLKDGNASRGDIQFQTEVEMISLAVHRHLLRLYGFCNTPTERILVYPYMSNGSVASRLKGKPVLDWGTRKRIAIGASRGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALEFGKAANQKGGILEWVKKIHQEKKLEVLVDKDLKANYDRVELEEMVQVALLCTQYQPGHRPKMSEVVRMLEGEGLAVRWEASQRVDSTKCKPHDFSSSDRYSDLTDDSSLLVQAMELSGPR | 619 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 1057861 | 1063333 | + | CmoCh15G002180.1 | Cmo15g00218 | 397726 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo15g00218 | 619 | Gene3D | Phosphorylase Kinase; domain 1 | 275 | 375 | - | - | |
Cmo15g00218 | 619 | Pfam | Leucine rich repeat N-terminal domain | 32 | 71 | IPR013210 | - | |
Cmo15g00218 | 619 | Pfam | Protein kinase domain | 300 | 566 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo15g00218 | 619 | ProSitePatterns | Protein kinases ATP-binding region signature. | 305 | 327 | IPR017441 | GO:0005524 | |
Cmo15g00218 | 619 | PANTHER | PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 | 7 | 619 | - | - | |
Cmo15g00218 | 619 | SMART | serkin_6 | 299 | 568 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo15g00218 | 619 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 7 | 619 | - | - | |
Cmo15g00218 | 619 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 418 | 430 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo15g00218 | 619 | Pfam | Leucine rich repeat | 123 | 182 | IPR001611 | GO:0005515 | |
Cmo15g00218 | 619 | ProSiteProfiles | Protein kinase domain profile. | 299 | 573 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo15g00218 | 619 | SUPERFAMILY | L domain-like | 33 | 205 | - | - | |
Cmo15g00218 | 619 | Gene3D | Ribonuclease Inhibitor | 31 | 213 | IPR032675 | - | |
Cmo15g00218 | 619 | Gene3D | Transferase(Phosphotransferase) domain 1 | 376 | 588 | - | - | |
Cmo15g00218 | 619 | SUPERFAMILY | Protein kinase-like (PK-like) | 283 | 595 | IPR011009 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g02959 | Cmo15g00218 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00476 | Cmo-Chr10:2124257 | Cmo15g00218 | Cmo-Chr15:1057861 | 0 | dispersed | |
Cmo11g00435 | Cmo-Chr11:2127616 | Cmo15g00218 | Cmo-Chr15:1057861 | 0 | dispersed | |
Cmo15g00218 | Cmo-Chr15:1057861 | Cmo18g01090 | Cmo-Chr18:11413289 | 0 | wgd | |
Cmo15g00218 | Cmo-Chr15:1057861 | Cmo04g02959 | Cmo-Chr4:20940568 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74899 | PF00069 | Pkinase | 1.40E-44 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo15g00218 | - | - | cpep:111808464 | 1198.34 |