Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00235 ATGGCGTTGGCCATGGTCATTCTTGCTCTGTTCTTGCTCCTCTGTTTTTGTGCTGCTTTGCTGAGATGGAATGAAGTTCGATACAGCAAAAAAGGGTTGCCTCCTGGTACAATGGGCTGGCCTATTTTTGGGGAAACCACTGAGTTTCTCAAGCAAGGACCAAACTTTATGAAATCCCAAAGAGCTAGGTATGGGAGCATTTTCAAGTCCCATATTTTGGGGTGTCCTACGATTGTTTGTATGGATCCAGAGGTTAATAGATATGTTCTGATGAATGAATCAAAAGGGCTTGTCCCTGGTTACCCTCAGTCCATGCTTGACATCCTTGGCAAATGCAATATCGCCGCCGTCCATGGCAGCGCCCACAAGCTCATGAGAGCTGCTCTGCTCTCCGTCGTGAGCCCCACCATGATTAAAGACCGACTTCTTCCTAAAGTTGATGAGTTTATGCGATCCCATTTGAGGAATTGGGATCGCCAAATCATTGACATCCAAGACAAGACTAAAGAGATGGCTCTCTGCTCATCTTTGAAGCAGATTGCAGGAATCGAGTCCGGTCCGCTATCGGAATCTTTCATCCCGGAGTTCTTCAAGCTCGTTCTCGGCACCCTCTCGCTCCCCATCGATTTTCCTGGCACAAACTACCGCCAAGGAATTCAGGCGAGGAAGAGCATAATAAAGCTGTTGCAGAAGCTGATAGACGAGAGAAGAGCCTCAAAGACAGAAAAAGACGACATGCTTGGGTTTTTTATGAGCGAGGAGAACAAATATAAGCTGAAGGATGAAGAGATCATTGATCAGATCATCACAGTTTTGTACTCTGGCTATGAAACTGTTTCGACAACTTCAATGATGGCTGTCAAGTTTCTCCATGATCATCCCAAAGTTCTTCAGCAACTCAGAGAAGAGCATTTGGCAATCAGAGAGAAGAAAAATCCTGAGGACCCCATTGATTGGGATGATCTTAAAGCTATGAAGTTCACTCGTGCGGTGATCTTTGAAACATCAAGGCTGGCCACAATTGTTAATGGGGTCTTGAGGAAAACTACAAAGGACATGGAACTAAATGGCTTTCTCATTCCAAAAGGATGGAGGATCTATGTGTATACCAGAGAGATAAACTATGACTCTTTTCTTTATTCTGAACCATTGACCTTCAACCCTTGGAGATGGCTGGACAAAAACTTGGAGTCCCATAATTACTTCTTCATCTTTGGAGGTGGAACTAGACAATGTCCTGGCAAAGAACTGGGAATTGCTGAGATTTCTACTTTTCTACATTACTTTGTAACTAAATACAGGTGGGAAGAAGTTGGAGGAGATAAACTGTTGAAATTTCCAAGAGTGGAAGCTCCAAGTGGATTCCACATTAGGGTTTCATCTTACTGA 1389 43.99 MALAMVILALFLLLCFCAALLRWNEVRYSKKGLPPGTMGWPIFGETTEFLKQGPNFMKSQRARYGSIFKSHILGCPTIVCMDPEVNRYVLMNESKGLVPGYPQSMLDILGKCNIAAVHGSAHKLMRAALLSVVSPTMIKDRLLPKVDEFMRSHLRNWDRQIIDIQDKTKEMALCSSLKQIAGIESGPLSESFIPEFFKLVLGTLSLPIDFPGTNYRQGIQARKSIIKLLQKLIDERRASKTEKDDMLGFFMSEENKYKLKDEEIIDQIITVLYSGYETVSTTSMMAVKFLHDHPKVLQQLREEHLAIREKKNPEDPIDWDDLKAMKFTRAVIFETSRLATIVNGVLRKTTKDMELNGFLIPKGWRIYVYTREINYDSFLYSEPLTFNPWRWLDKNLESHNYFFIFGGGTRQCPGKELGIAEISTFLHYFVTKYRWEEVGGDKLLKFPRVEAPSGFHIRVSSY 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1161724 1164694 - CmoCh15G002350.1 Cmo15g00235 397743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00235 462 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g00235 462 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g00235 462 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g00235 462 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g00235 462 PANTHER CYTOCHROME P450 26 7 460 - -
Cmo15g00235 462 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 460 - -
Cmo15g00235 462 Pfam Cytochrome P450 34 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g00235 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Cmo15g00235 462 Gene3D Cytochrome P450 24 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g00235 462 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g00235 462 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g00235 462 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g00235 462 PRINTS E-class P450 group I signature 329 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g00235 462 PRINTS E-class P450 group I signature 369 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g00235 462 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g00235 462 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo15g00235 462 SUPERFAMILY Cytochrome P450 27 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02940 Cmo15g00235 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01087 Cmo-Chr14:6166390 Cmo15g00235 Cmo-Chr15:1161724 1.34E-77 dispersed
Cmo14g01302 Cmo-Chr14:10888100 Cmo15g00235 Cmo-Chr15:1161724 4.53E-87 dispersed
Cmo15g00235 Cmo-Chr15:1161724 Cmo16g01056 Cmo-Chr16:7421563 8.12E-96 dispersed
Cmo15g00235 Cmo-Chr15:1161724 Cmo04g02940 Cmo-Chr4:20826192 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00235 K09590 - csv:101206858 853.588