Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo15g00235 | ATGGCGTTGGCCATGGTCATTCTTGCTCTGTTCTTGCTCCTCTGTTTTTGTGCTGCTTTGCTGAGATGGAATGAAGTTCGATACAGCAAAAAAGGGTTGCCTCCTGGTACAATGGGCTGGCCTATTTTTGGGGAAACCACTGAGTTTCTCAAGCAAGGACCAAACTTTATGAAATCCCAAAGAGCTAGGTATGGGAGCATTTTCAAGTCCCATATTTTGGGGTGTCCTACGATTGTTTGTATGGATCCAGAGGTTAATAGATATGTTCTGATGAATGAATCAAAAGGGCTTGTCCCTGGTTACCCTCAGTCCATGCTTGACATCCTTGGCAAATGCAATATCGCCGCCGTCCATGGCAGCGCCCACAAGCTCATGAGAGCTGCTCTGCTCTCCGTCGTGAGCCCCACCATGATTAAAGACCGACTTCTTCCTAAAGTTGATGAGTTTATGCGATCCCATTTGAGGAATTGGGATCGCCAAATCATTGACATCCAAGACAAGACTAAAGAGATGGCTCTCTGCTCATCTTTGAAGCAGATTGCAGGAATCGAGTCCGGTCCGCTATCGGAATCTTTCATCCCGGAGTTCTTCAAGCTCGTTCTCGGCACCCTCTCGCTCCCCATCGATTTTCCTGGCACAAACTACCGCCAAGGAATTCAGGCGAGGAAGAGCATAATAAAGCTGTTGCAGAAGCTGATAGACGAGAGAAGAGCCTCAAAGACAGAAAAAGACGACATGCTTGGGTTTTTTATGAGCGAGGAGAACAAATATAAGCTGAAGGATGAAGAGATCATTGATCAGATCATCACAGTTTTGTACTCTGGCTATGAAACTGTTTCGACAACTTCAATGATGGCTGTCAAGTTTCTCCATGATCATCCCAAAGTTCTTCAGCAACTCAGAGAAGAGCATTTGGCAATCAGAGAGAAGAAAAATCCTGAGGACCCCATTGATTGGGATGATCTTAAAGCTATGAAGTTCACTCGTGCGGTGATCTTTGAAACATCAAGGCTGGCCACAATTGTTAATGGGGTCTTGAGGAAAACTACAAAGGACATGGAACTAAATGGCTTTCTCATTCCAAAAGGATGGAGGATCTATGTGTATACCAGAGAGATAAACTATGACTCTTTTCTTTATTCTGAACCATTGACCTTCAACCCTTGGAGATGGCTGGACAAAAACTTGGAGTCCCATAATTACTTCTTCATCTTTGGAGGTGGAACTAGACAATGTCCTGGCAAAGAACTGGGAATTGCTGAGATTTCTACTTTTCTACATTACTTTGTAACTAAATACAGGTGGGAAGAAGTTGGAGGAGATAAACTGTTGAAATTTCCAAGAGTGGAAGCTCCAAGTGGATTCCACATTAGGGTTTCATCTTACTGA | 1389 | 43.99 | MALAMVILALFLLLCFCAALLRWNEVRYSKKGLPPGTMGWPIFGETTEFLKQGPNFMKSQRARYGSIFKSHILGCPTIVCMDPEVNRYVLMNESKGLVPGYPQSMLDILGKCNIAAVHGSAHKLMRAALLSVVSPTMIKDRLLPKVDEFMRSHLRNWDRQIIDIQDKTKEMALCSSLKQIAGIESGPLSESFIPEFFKLVLGTLSLPIDFPGTNYRQGIQARKSIIKLLQKLIDERRASKTEKDDMLGFFMSEENKYKLKDEEIIDQIITVLYSGYETVSTTSMMAVKFLHDHPKVLQQLREEHLAIREKKNPEDPIDWDDLKAMKFTRAVIFETSRLATIVNGVLRKTTKDMELNGFLIPKGWRIYVYTREINYDSFLYSEPLTFNPWRWLDKNLESHNYFFIFGGGTRQCPGKELGIAEISTFLHYFVTKYRWEEVGGDKLLKFPRVEAPSGFHIRVSSY | 462 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 1161724 | 1164694 | - | CmoCh15G002350.1 | Cmo15g00235 | 397743 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo15g00235 | 462 | PRINTS | P450 superfamily signature | 274 | 291 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo15g00235 | 462 | PRINTS | P450 superfamily signature | 330 | 341 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo15g00235 | 462 | PRINTS | P450 superfamily signature | 403 | 412 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo15g00235 | 462 | PRINTS | P450 superfamily signature | 412 | 423 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo15g00235 | 462 | PANTHER | CYTOCHROME P450 26 | 7 | 460 | - | - | |
Cmo15g00235 | 462 | PANTHER | CYTOCHROME P450 FAMILY PROTEIN | 7 | 460 | - | - | |
Cmo15g00235 | 462 | Pfam | Cytochrome P450 | 34 | 442 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo15g00235 | 462 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 405 | 414 | IPR017972 | GO:0005506|GO:0016705 | |
Cmo15g00235 | 462 | Gene3D | Cytochrome P450 | 24 | 459 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo15g00235 | 462 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo15g00235 | 462 | PRINTS | E-class P450 group I signature | 263 | 280 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo15g00235 | 462 | PRINTS | E-class P450 group I signature | 283 | 309 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo15g00235 | 462 | PRINTS | E-class P450 group I signature | 329 | 347 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo15g00235 | 462 | PRINTS | E-class P450 group I signature | 369 | 393 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo15g00235 | 462 | PRINTS | E-class P450 group I signature | 402 | 412 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo15g00235 | 462 | PRINTS | E-class P450 group I signature | 412 | 435 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo15g00235 | 462 | SUPERFAMILY | Cytochrome P450 | 27 | 442 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g02940 | Cmo15g00235 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo14g01087 | Cmo-Chr14:6166390 | Cmo15g00235 | Cmo-Chr15:1161724 | 1.34E-77 | dispersed | |
Cmo14g01302 | Cmo-Chr14:10888100 | Cmo15g00235 | Cmo-Chr15:1161724 | 4.53E-87 | dispersed | |
Cmo15g00235 | Cmo-Chr15:1161724 | Cmo16g01056 | Cmo-Chr16:7421563 | 8.12E-96 | dispersed | |
Cmo15g00235 | Cmo-Chr15:1161724 | Cmo04g02940 | Cmo-Chr4:20826192 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo15g00235 | K09590 | - | csv:101206858 | 853.588 |