Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo15g00236 | ATGGATGCGAATAGTTCGCGATTTCAGTCGTTTGGTCAAACTGAGATTAACTGGGACAAGCTTGATAAAGCAAAATTTTATGGCATCGGAGCTGGTCTCTTTACCGGGATTACAGTCGCACTGTACCCTGTTTCCGTTGTAAAAACAAGGATGCAGGTTGCTGTAAAGGATTCTGCAGAGAAAAACGCGGCGTCTGTCGTTAAAGGCTTACTTAAGAATGATGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTAATCACTGGTGCAATTCCTGCAAGGATTATCTTTCTTACCGCTTTGGAGACGACCAAAGTGGGAGCCTTTAAAATGGTTGAGCCATTTAAATTATCTGAACCCTCACAGGCTGCTATAGCAAACGGGTTAGCTGGCATGACTGCATCCCTTTTCTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAAAAGCTAATGGTTCAAGGATACTCGGGTAATGCAAGATATAATGGGGGCTTAGATGTTGCTCGTAAACTGATAAAGTCCGATGGCATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATAACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCATCATCTGGAGGTTCTTAGGCCAAAACTCAGCTTCTGAGAGCTTTGCTCCAAGCCATACCCAACTTATTTCAGTGCAAGCTGGGGGTGGAATAATCGCAGGTGCAACAGCTTCCTGCATTACAACACCATTGGACACCATAAAGACTCGCTTACAGGTGATGGGCGATAAAGGGAAGACAGCAAGACAAATTGTTGAAAGCTTAATCGCAGAGGATGGATGGAAAGGTTTCTACAGGGGGCTGGGTCCTCGGTTCTTCAGCATGTCAGCCTGGGGAACCTCCATGATATTGGCTTACGAGTACTTAAAGCGCTTGTGTTCAAATGATGAACAGAGTTGA | 966 | 44.93 | MDANSSRFQSFGQTEINWDKLDKAKFYGIGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNAASVVKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAFKMVEPFKLSEPSQAAIANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNARYNGGLDVARKLIKSDGIRGLYKGFGLSVITYSPSSAVWWASYGASQRIIWRFLGQNSASESFAPSHTQLISVQAGGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGFYRGLGPRFFSMSAWGTSMILAYEYLKRLCSNDEQS | 321 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 1176543 | 1180513 | + | CmoCh15G002360.1 | Cmo15g00236 | 397744 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo15g00236 | 321 | Pfam | Mitochondrial carrier protein | 238 | 317 | IPR018108 | - | |
Cmo15g00236 | 321 | Pfam | Mitochondrial carrier protein | 30 | 106 | IPR018108 | - | |
Cmo15g00236 | 321 | Pfam | Mitochondrial carrier protein | 125 | 211 | IPR018108 | - | |
Cmo15g00236 | 321 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 230 | 314 | IPR018108 | - | |
Cmo15g00236 | 321 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN | 1 | 318 | - | - | |
Cmo15g00236 | 321 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 19 | 107 | IPR018108 | - | |
Cmo15g00236 | 321 | PRINTS | Mitochondrial carrier protein signature | 39 | 53 | IPR002067 | GO:0055085 | |
Cmo15g00236 | 321 | PRINTS | Mitochondrial carrier protein signature | 239 | 261 | IPR002067 | GO:0055085 | |
Cmo15g00236 | 321 | PRINTS | Mitochondrial carrier protein signature | 183 | 201 | IPR002067 | GO:0055085 | |
Cmo15g00236 | 321 | SUPERFAMILY | Mitochondrial carrier | 19 | 311 | IPR023395 | - | |
Cmo15g00236 | 321 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 1 | 318 | - | - | |
Cmo15g00236 | 321 | Gene3D | Mitochondrial carrier domain | 26 | 321 | IPR023395 | - | |
Cmo15g00236 | 321 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 122 | 210 | IPR018108 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g02937 | Cmo15g00236 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo14g01603 | Cmo-Chr14:12683302 | Cmo15g00236 | Cmo-Chr15:1176543 | 1.33E-106 | dispersed | |
Cmo15g00236 | Cmo-Chr15:1176543 | Cmo17g00679 | Cmo-Chr17:6942765 | 4.19E-82 | dispersed | |
Cmo15g00236 | Cmo-Chr15:1176543 | Cmo04g02937 | Cmo-Chr4:20803476 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo15g00236 | K15121 | - | csv:101206140 | 596.275 |