Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00311 ATGAAGATCTCCAAGTTCTTCTTCACATGGCTGTCGCTGGATCGTCTTCTTTTTCTTCTTCTACTATGTGCTTCTCCATCTTTTTGTGTAGTTCTAGAAGACGACATAAGGTGCCTTCGAGGGGTTAAGAATGCGCTTGTTGATCCACTCGGAAGGCTTAGTTCTTGGGATTTCAAGAACACATCTGTTGGCTATCTCTGCAACAAATTTGTCGGTCTCTCTTGCTGGAACGACCGTGAGAATCGCATTCTGAGTCTCGAGCTTAGAGATATGAAGCTTTCCGGTTCCATTTCTGAGGACTTGCAGTACTGTGTGAGTCTGCAGAAAATGGATCTGTCCGGGAATAGCTTTTCCGGTGCGATCCCGCCGCATATTTGTAAGTGGCTTCCGTATTTGGTTAGCATAGATTTGTCGAACAATCAATTTACCGGCCCTATTCCGGCTGATCTCGCCGGGTGTTCTTATCTGAATTCGTTGATTTTGTCTGATAATGGGCTTTCTGGTACAATACCAGTTGAGCTCACGAGTTTGGGTAGGCTTAACAAGTTTTCCGTTGCGAACAATCATCTCACTGGTACGATTCCCTCCTTTTTTGATAAATTTGGGAAGGAGGATTTTGATGGGAACAGTGACTTATGTGGAGGGCCTGTTGGATCGAGTTGTGGCGGGTTGAGCAAGAAGAATCTTGCGATCATTATAGCTGCTGGTGTGTTTGGTGCCGCGGCTTCTCTGTTGTTAGGTTTTGGGTTGTGGTGGTGGTATCAATCTAGAATGAACATGAAGAAGAGAAGGGGATATCGGGATGGAATTAGTGGGGATTGGGCTGATAGATTGAGAGCCTATAAGCTTGTTCAAGTTTCCTTGTTTCAAAAGCCTCTTGTGAAAGTTAAATTGGCTGATTTGATGGCTGCTACTAACAATTTCAATTCTGAAAATATTATAGTTTCTTCTAGAACTGGGACTACTTATAGAGCTGTTCTTCCAGATGGCTCTGTGCTTGCTATAAAGCGGCTCAATACCTGCAAGCTCGGTGAGAAGCTGTTTCGAATGGAGATGAACCGGTTAGGATTGATAAGGCACCCGAATTTGACACCCCTTTTGGGATTCTGTGTTGTGGAAGAGGAAAAGCTTTTGGTTTATAAGTATATGTCTAATGGTACTTTGTCCTCTTTGTTACATGGAAATGGTGAGATATTGGATTGGCCAACTAGGTTTAGGATCGGTTTGGGTGCGGCTAGGGGTCTTGCTTGGCTTCATCATGGATGCCAACCTCCATTCATGCATCAAAACATATGTTCTAGTGTAATTCTTGTGGATGAAGACTATGATGCTAGAATCATTGATTTTGGATTAGCAAGGTTGATGTCTTCAGATTCTCACGACAGTAGTTTTGTAAATGGAGATTTAGGGGAGCTTGGTTACATCGCTCCCGAATATCCGAGCACCATGGTTGCTTCTCTGAAGGGGGATGTTTATGGATTTGGGGTTGTGCTTTTGGAGTTGGTCACTGGCCAAAAACCTCTAGAAGTCACTAAAGCAGAGGAAGGCTATAAGGGTAACTTGGTGGATTGGGTTAATCAGCTAAGTATTTCGGGTCGAATTAAGGATGTTATTGATAAAGATCTTTGTGGGAAAGGGAACGATGAGGAAATCTTACAATTTATGAAAATTACAATGAACTGCGTTGTTTCTCGCCCCAAAGATAGGTGGTCTATGTATCAAGTTTATCAGTCAATGAAAACCATGGCTAAAGACTACAGTTTCCCTGACCCAGATGTTGAATTCCCACTTTTATTCGGCAAGGGAGATGAACTCATGTAG 1821 43.05 MKISKFFFTWLSLDRLLFLLLLCASPSFCVVLEDDIRCLRGVKNALVDPLGRLSSWDFKNTSVGYLCNKFVGLSCWNDRENRILSLELRDMKLSGSISEDLQYCVSLQKMDLSGNSFSGAIPPHICKWLPYLVSIDLSNNQFTGPIPADLAGCSYLNSLILSDNGLSGTIPVELTSLGRLNKFSVANNHLTGTIPSFFDKFGKEDFDGNSDLCGGPVGSSCGGLSKKNLAIIIAAGVFGAAASLLLGFGLWWWYQSRMNMKKRRGYRDGISGDWADRLRAYKLVQVSLFQKPLVKVKLADLMAATNNFNSENIIVSSRTGTTYRAVLPDGSVLAIKRLNTCKLGEKLFRMEMNRLGLIRHPNLTPLLGFCVVEEEKLLVYKYMSNGTLSSLLHGNGEILDWPTRFRIGLGAARGLAWLHHGCQPPFMHQNICSSVILVDEDYDARIIDFGLARLMSSDSHDSSFVNGDLGELGYIAPEYPSTMVASLKGDVYGFGVVLLELVTGQKPLEVTKAEEGYKGNLVDWVNQLSISGRIKDVIDKDLCGKGNDEEILQFMKITMNCVVSRPKDRWSMYQVYQSMKTMAKDYSFPDPDVEFPLLFGKGDELM 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1452082 1453902 - CmoCh15G003110.1 Cmo15g00311 397819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00311 606 Pfam Protein tyrosine and serine/threonine kinase 333 576 IPR001245 GO:0004672|GO:0006468
Cmo15g00311 606 Pfam Leucine rich repeat N-terminal domain 33 76 IPR013210 -
Cmo15g00311 606 SUPERFAMILY L domain-like 30 207 - -
Cmo15g00311 606 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 15 601 - -
Cmo15g00311 606 Gene3D Phosphorylase Kinase; domain 1 269 382 - -
Cmo15g00311 606 ProSiteProfiles Protein kinase domain profile. 308 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo15g00311 606 PANTHER RECEPTOR-LIKE PROTEIN 55 15 601 - -
Cmo15g00311 606 Gene3D Transferase(Phosphotransferase) domain 1 383 590 - -
Cmo15g00311 606 Gene3D Ribonuclease Inhibitor 33 223 IPR032675 -
Cmo15g00311 606 SUPERFAMILY Protein kinase-like (PK-like) 285 578 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g00311 Cmo-Chr15:1452082 Cmo18g01258 Cmo-Chr18:12320265 1.50E-06 dispersed
Cmo17g01291 Cmo-Chr17:10153181 Cmo15g00311 Cmo-Chr15:1452082 5.71E-49 dispersed
Cmo15g00311 Cmo-Chr15:1452082 Cmo04g02871 Cmo-Chr4:20430974 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74904 PF07714 PK_Tyr_Ser-Thr 8.60E-29 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00311 - - cmos:111445255 1189.87