Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00330 ATGGCTCCGAGCTCTGTTGTTGTTACAATTGAGAAGCATAGCAGCTTCCCTTTAGTGGAAATCAATGGCTCTGATTCCTTGTTGCTTCCGGAGAAGCAGAAGGCTGCGAGTCCCAAGCAGCTCACATGGGTTCTTCTTCTCAAAGCCCATAGAGCTCTGTTTTTCTTCTCGTGGATGGCGATGACTATGAAGGCGGTGTTTGCTTCTGTTAAGAAACGCATTGCTCATGCGGATATTAACGAAGAGGATTCCAAAAGCCGTAAGTTATATAGATTCATTAAGGCTTTTCTTGCGATTTCAATTACGGGTTTGATCGTCGAAGTTGTTGCTCATTTCAAGAAGTGGAATCTGCGAATGATTCAGCCATTGGAGCTCGAAGTTCATGGGATTATTCAATGGTTTTACGTCTCGTGGCTTTCGTTTCGTGTTGATTACATTGCGCCAATGGTTCTCATGCTTTCCAAATTCTGCATTGTTCTGTTCTTGATCCAATCTCTCGATCGCCTTGTTCTCTGCTTCGGCTGCTTTTGGATCAAATACAAGAAAATCAAACCCACTATTCAAGATAACGCTTATGATTTGGAAGATGCTTCGAATTTTCCTTTGGTTCTTGTTCAAATCCCAATGTGTAATGAGAGAGAGGTCTATGCGCAATCGATTGCTGCTGCTTGTGAGCTTGACTGGCCGAGGAATCGGATTTTGATTCAAGTTCTTGATGATTCAGACGATGGAAATCTTCAGCGTTTGATCAAAGAAGAAGTTCTATCATGGAATGAAAAGGGTGTTAATATTGTTTATCGACATAGATTGATCCGAACTGGGTACAAAGCTGGGAATCTTCAGTCCGCCATGGCTTGTGATTATGTTAAAGATTATGAGTTCATAGCTATTTTAGATGCTGATTTCCAGCCCAACCCAGATTTTCTTAAGCTAACAATCCCTCATTTCAAGGGAAATCCTGAGGTGGGGCTTGTCCAAGCTCGTTGGGCGTTTGTTAACAAAGAAGAAAACTTGCTTACCAGACTCCAAAACATCAACTTGTGCTTCCACTTTGAAGTGGAGCAGCAAGTTAATGGGGTTTTTCTCAACTTCTTTGGATTCAATGGAACAGCAGGCGTTTGGAGAGCGAAAGCGCTCGAGGAATCCGGTGGCTGGCTCGAGCGCACGACGGTGGAGGACATGGATATCGCTGTTCGAGCACACTTGATGGGATGGAAATTCATCTTCCTCAATGATGTCAAGGTGCTTTGTGAATTGCCTGAATCATATGAAGCTTACAAGAAACAGCAACACCGTTGGCATTCTGGTCCTATGCAGCTCTTCAGATTATGCCTTCCTTCCATCATAACTTCAAAGATATCAATATGGAAGAAGACGAACTTGATATTCCTGTTCTTCCTCTTAAGAAAACTCATACTTCCCTTTTACTCATTCACTTTGTTCTGCATAATTCTTCCATTAACAATGTTCATTCCAGAAGCAGAGTTGCCTCTGTGGGTAATCTGCTACATCCCAGTGTTCATGTCCTTACTAAACATTCTCCCATCCCCAAAATCCTTCCCTTTCTTGATCCCATATCTCTTGTTTGAGAACACCATGTCAGTAACAAAGTTCAACGCCATGATTTCGGGGCTATTCCAGCTCGGAAGCTCATACGAATGGGTCGTGACAAAGAAAACAGGACGATCATCAGAATCCGACTTCCTAGCATTAGCCGAACGAGAGTCGAAAACGTGGAACGAGGAGAAGATTCTAAGGAGACATTCAGAGTCAGGGCTGGAGTTGTTGAGTAAATTGAACCAACAAGACAAGCAAATGGCTTCAAAGAAGAAGAGAAACAAGGTGTATAGAAAAGAGCTAGCTCTTGCCTTTCTGCTGCTCACTGCAGCAGCCAGAAGCTTGCTGTCAGCTCATGGAGTTCACTTCTACTTCTTGCTGTTCCAAGGGCTGTCGTTCCTGGTGGTGGGTTTGGACTTGATTGGCGAGCAAATGAACTGA 1998 43.44 MAPSSVVVTIEKHSSFPLVEINGSDSLLLPEKQKAASPKQLTWVLLLKAHRALFFFSWMAMTMKAVFASVKKRIAHADINEEDSKSRKLYRFIKAFLAISITGLIVEVVAHFKKWNLRMIQPLELEVHGIIQWFYVSWLSFRVDYIAPMVLMLSKFCIVLFLIQSLDRLVLCFGCFWIKYKKIKPTIQDNAYDLEDASNFPLVLVQIPMCNEREVYAQSIAAACELDWPRNRILIQVLDDSDDGNLQRLIKEEVLSWNEKGVNIVYRHRLIRTGYKAGNLQSAMACDYVKDYEFIAILDADFQPNPDFLKLTIPHFKGNPEVGLVQARWAFVNKEENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRAKALEESGGWLERTTVEDMDIAVRAHLMGWKFIFLNDVKVLCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIITSKISIWKKTNLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPLWVICYIPVFMSLLNILPSPKSFPFLIPYLLFENTMSVTKFNAMISGLFQLGSSYEWVVTKKTGRSSESDFLALAERESKTWNEEKILRRHSESGLELLSKLNQQDKQMASKKKRNKVYRKELALAFLLLTAAARSLLSAHGVHFYFLLFQGLSFLVVGLDLIGEQMN 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1534075 1536839 + CmoCh15G003300.1 Cmo15g00330 397838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00330 665 Coils Coil 599 619 - -
Cmo15g00330 665 SUPERFAMILY Nucleotide-diphospho-sugar transferases 203 503 IPR029044 -
Cmo15g00330 665 Pfam Glycosyl transferase family group 2 295 500 IPR001173 -
Cmo15g00330 665 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 4 1 664 - -
Cmo15g00330 665 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 193 420 IPR029044 -
Cmo15g00330 665 PANTHER - 1 664 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02854 Cmo15g00330 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01628 Cmo-Chr1:12376518 Cmo15g00330 Cmo-Chr15:1534075 0 dispersed
Cmo09g00524 Cmo-Chr9:2448784 Cmo15g00330 Cmo-Chr15:1534075 0 dispersed
Cmo12g00551 Cmo-Chr12:3402529 Cmo15g00330 Cmo-Chr15:1534075 0 dispersed
Cmo15g00330 Cmo-Chr15:1534075 Cmo17g01263 Cmo-Chr17:9943064 0 dispersed
Cmo20g00575 Cmo-Chr20:2813782 Cmo15g00330 Cmo-Chr15:1534075 7.33E-129 dispersed
Cmo15g00330 Cmo-Chr15:1534075 Cmo04g02854 Cmo-Chr4:20351480 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00330 K20887 - csv:101208151 1224.15