Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00335 ATGTTGCAGATGATGGAGGCTGCCATGCCCTTCACTGCCATGATAATGGTGGAGAGCACAGATGTGATCATATCAACACTAATCAAAGTAGCCATGGCCAAAGGGATGAACAACTTGGTCTTCCTTGTCTATTCTAACGCTCTCGCCACCTTCCTTCTCCTTCCCTTTCTCCTCTTTTCTTCCAGAAACAATCTGGGTGCACCTCTATCTTTCTCTATGATCCTTGCCTTCTTTCTCCTTGGGCTTAATGGGAGTGTGGGTGAGTTATTGGCAAACACAGGGATAAACTACAGCTCCCCTGTTCTTTTATCAGCAATGGCAAATCTCATCCCCATTTTCACCGTTTTTCTTGCTGTTATTTTCAGAATGGAGAGGCTTGATTTCAAGAGAAGCAGTGGGAAAGCCAAGTGTTTGGGTACCATTATAGCCGTGTCAGGAGCTTTCTTAATAACTCTGTATAAAGGGCCTGTGTTGATCATGTCCTCCTCTCAGTCGGTGGGACAAGAAGCTGTAGCACTGTCACAGAAGCCAAACTGGGTGTTTGGTGGCTTTCTCTTTCTAATGGTTTGTTTTCTATCATCAACTTGGAAGATTGCTCAGACATGGTTTGTTAGCGTATACCCAAACAAAAAGATCACAAGCGTGTTCTTCTTCACATTCTTTGTGACGGTCCAAACGGCAGCCTTCGCTGTGTTCATCAAAACAAACCCAACTGTGTGGCAAGTCCGACCCGACATCGAAATGGTCACCATCGTATTCTCCGCCATATTTGGGAGTATGGTTCGTACTGGCGTCCACATATGGTGCTTGCAAAGGAAGGGCCCAGTCTTTGTTGCAATGTTCAAGCCCCTGGGCATGGTCATCGCCGTCGCCTTGGCCGTCAGCTTTCTTCGTGAGTCGCTTTGTCTTGGCAGTGTGATCGGATCGGTGGTGATTGGGTGTGGGTTTTATAGTGTGATATGGGGGCAGATCAAACAACTAGAATTGGACCTGGACTTACCACCTCCTTCTACTTCTGAATCACCATCTGCCTCCCTTTTGCACCACTCCTCCTCTCTACAACATACCCAAGACAACAATTTTGGAACCTCCCTAGTAGGGCGGGTTTGA 1110 46.94 MLQMMEAAMPFTAMIMVESTDVIISTLIKVAMAKGMNNLVFLVYSNALATFLLLPFLLFSSRNNLGAPLSFSMILAFFLLGLNGSVGELLANTGINYSSPVLLSAMANLIPIFTVFLAVIFRMERLDFKRSSGKAKCLGTIIAVSGAFLITLYKGPVLIMSSSQSVGQEAVALSQKPNWVFGGFLFLMVCFLSSTWKIAQTWFVSVYPNKKITSVFFFTFFVTVQTAAFAVFIKTNPTVWQVRPDIEMVTIVFSAIFGSMVRTGVHIWCLQRKGPVFVAMFKPLGMVIAVALAVSFLRESLCLGSVIGSVVIGCGFYSVIWGQIKQLELDLDLPPPSTSESPSASLLHHSSSLQHTQDNNFGTSLVGRV 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1548106 1550242 - CmoCh15G003350.1 Cmo15g00335 397843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00335 369 PANTHER WAT1-RELATED PROTEIN 11 328 - -
Cmo15g00335 369 Pfam EamA-like transporter family 26 151 IPR000620 GO:0016020|GO:0016021
Cmo15g00335 369 PANTHER WAT1-RELATED PROTEIN 11 328 IPR030184 GO:0016021|GO:0022857
Cmo15g00335 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 153 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01705 Cmo15g00335 CCT
Cmo11g01705 Cmo15g00335 ECH
Cmo04g02852 Cmo15g00335 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g00335 Cmo-Chr15:1548106 Cmo04g01372 Cmo-Chr4:6992590 2.88E-51 dispersed
Cmo15g00332 Cmo-Chr15:1540074 Cmo15g00335 Cmo-Chr15:1548106 8.16E-82 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00335 - - csv:101209120 418.698