Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo15g00337 ATGGCCTTCTTGTTCTTCTTTGGCTCCATAGAAGCTCTCTACTTCTCTGCATCTCTTATTAAGTTTCTTGAAGGAGCTTGGGTTGCTATTGCTCTTTCACTGACCTTCCTTGTGGTTATGTCTGTTTGGCACTATGGCACTGTCAAGAAATATGAGGCTGATGTTGAAAACAAAGTCCCTATAAATTGGCTCCTCAGAATAGGACCCAAGATCGGGATAGTTCGGGTCCGAGGGATCGGCCTTGTACATACCGAACTCGTTTCCGGGATCCCTGCCATTTTCTCTCATTTTGTCACCAACCTTCCAGCTTTTCACCAAATTCTAGTCTTCCTATGCATCAAATCTGTCACGGTGCCTCATGTGAGGCCTGAGGAAAGATTTCTAGTTGGTCGAGTCGGGCCAAAGGAGCATCGAATTTACCGTTGCATCGCACGGTATGGCTACCGTGACATGCACAAGGACGACTTGGAGTTCGAGAGAGATCTTTCCTGCAGCATTGCAGAATTCATACGGTCGGAGGGAACAGAACGCAACAATTTTAGACACGAAGACTTGGACGACGATGAAAGAATGACAGTGATTGGAACTTCATCAACTCAACTAGACGGTGTACAAATGTGTGAAAACGAAGCGTACTCTTCACCGATCGTGGGCACTTCGGAGCTACCGAAGTCGGAGAAGATGAGGAAAAGAGTACGATTCGTTGTCCCCGAGAGTCCGAAAATGGATATCGACACGAGAGGAGAGTTGGAAGAGTTGATGGAGGCAAGGGAGGCAGGAATGGCATTCATAATGGGGCATTCATATGTGAAGGCAAAGAAGGGATCAGGGTGGATGAAGAAGGTTGTGATTAATTATGGATATGATTTGTTGAGGAAAAATTCAAGAGGGCCATCTTATGCTTTGAGCATTCCTTTTGCTTCTACTCTTGAGTTTTCTACCTTCTTTTTGCTTTGGCTAGAATGGATTTGGGTCGGTTTTGCTCTCGTTTTTGTTCTTCTTTTTGGTGGGGTTTCTTCCGCTTCAGCTACGCCTCCTGCAAAAATTGTTCGTGGGGTTCTTTCTAATGTGGTTTCTTCTCTTGTGAAGAGGCTATGGTCGATGAAATCCAGCGCCAAAACTGCTGTTTCCAGCCGTTCGATGATGAAATTTGAGAGTGGATATACTGTTGAGACGGTGTTCGATGGCAGTAAGCTGGGAATTGATCCATATTCGGTTGAGGTATCGCCTAGTGGGGAGCTTTTGATCTTAGATGCTGAAAACAGCAACATCTATAAGATCTCTATGCCATTGTCTCGATTTCTATCTGTTCTTGCCATTTCTAAGCTGGGACTTCTCAGATGGCCCAAGCTGGTTTCGGGATCGGCTGAAGGATACTCGGGACATGTCGATGGTCATCCAAGAGAGGCAAGAATGAACCATCCGAAAGGGTTTACTTTGGATGCAAGAGGGAATGTGTACATTGCTGATACTATGAATATGGCTATCAGAAAGATTAGTGACACAGGGGTTACAACTATTGCCGGTGGAAGATGGAACCAAGGGAATGGTCATATTGATGGTCCAAGTGAAGATGCAAAGTTCTCAAATGATTTTGATGTCGTTTATGTGGGAAGTAGCTGCTCTCTTTTGGTTATAGACAGAGGAAACAGTGCAATTCGAGAGATTGAACTCAACTACGATGATTGCAATACTCAATATGCCGATAGTCTCAACTTGGGGGTTGTATTGCTGGTTGCTGCCGGCTTATTTGGTTACCTGCTTGCGTTGCTCCAACGTAGAGTGCAAGCTATAAGTCATCAAATGATGAAAGCTACACCAGTTGCCCCATACCAAAGACCTCCTCTGAAGTCAGTGAGGCCTTCCTTGATTCCAAATGAAGATGAACCAGAGAAACTGGAGGAAGGCTTCTTCGGTTTGCTTGGGAGGCTATTTGTCAACAGCGGTTCATCTGTGGCCGATATCTTTGGCGGATTGTTATCTGGGTTTCGAAGGAAGCCTCTCAATAACCAGATCCATCAGCAGTTTCAACCAGTTAACAGACATCCAAATGCTTGGCCCTTGCAAGAAAGCTTTATGATTCCAGATGAAGACGAGCCACCATCCATCGAAGCGAAAACTCCGACAATAAAAAAAACATATCCATTTATGACACAAGACCTCGATCGATCACACCAGTTCAAGCCAAACAGGAGCTACTTTAATGGGTGGGATAGTGAATTCCATCAACAGCAACAACAGCAGCAGCAGATACAGCATAATCATCAACAGCAGCATCTACAACATCATCACCAACAGCAGCAGCATATACAACAACAACATCATCATCATCATCAACAGCATAATTACAATCGACAATATTCAGCTGGCCCAACAACCTACTATGAGAAGAGTTGTGAGACAAGCGAAATTGTGTTCGGTGCAGTTCAAGAGCAAGATGGACGTCGTGAAGCAATGGTCATCAAGGCTGTTGATTATGGAGATCCGAGATATAACCATCACAACATTCGTGCTCGATACAACTATACTGGTAATGACACATTGATGCACTCGCAGACGGCGTATGAAGAGGCATTGAGTGTACTATCGTCGTTGATTGTCAACCGAAGACGCTGTGATAAATCTGGGGACCGATTTGAGTTGATGTTTGAGTATGTGAAGATGCTTGATTTAGAGGAGCCCATGCGGCGAATGAAGGTCATTCATGTGGCTGGCACCAAAGGCAAGGAAAAAACTAGTAAGGACATACCAATGCCTCACTTGTTTCGCTTCCTTGCATTACTTGCATTCAAAATCTTTTCAGATGAGCAGGTGGATGTAGCTATCTTGGAAGTTGGTTTAGGTGGAACTTTTGATGCTACCAATGTGGTCCAGGAACCCCTTGTGTGTGGTATAGCTTCTCTGGGTTATGACCACATGGAAATTCTTGCTTTTACTCTGTTTCAACCTGATGAAGCCATGCATGTGCTTAGAGATAAGGCTTCTCAATTGGATGTACAACTTACGGTCGTGCCATCGTTGGATCCAGAGCTTCTACACGGTCGTAAACTCGGGCTTGAAGGCGAGCATCAGTATCTAAATGCTGGTCTTGCTATTGCCTTATCCTCCACTTGGCTACACAGGGCTGGCCATTCCAAACTGTCATATATGGAACAGAGTAGGTCGTTGCCTGAGAAGTTCATAGAAGGGCTTACCAGTGCCAGCTTTGATGGACGAGCACAGATTGTTGCTGATAGATGTGTTGATATTGAATCCCCGGAAGGTCTTGTTTTCTATTTGGATGGAGCTCATAGCCCTGAGAGCATGGAGGTTTGTGCTAGATGGTTTTCTGCTGCAATAAGACATAACCAACGAGGGATGTTAAATCATCAGTCGGAGGATAAGAGTACATCTGACAATAATGAAGCAAGGAAGAAATCTGTGCAGAAAGCCCTCTTTGTTCCAAATACATCAGTCTTCAACAAGGTTGGAAGCCATAGCTTAGCAGAAGCAAATGGGCAAGTCGACCTGTCTTGGCAGTTTCATGTTCGAAGGGTATGGCAAAACACGATACAACGAGACAAAGGAAGTGATTCTAAAGCAGAAGTGGTAGGTAAGAGTTGTGAGAATAGCACAGTGTTTTCTTCTCTCCCAATGGCTATTAAGTGGCTCCGGGACAGTGTCTTGCAGCAGAATAGGTCCATTCGACTTCAGGTGCTTGTAACTGGTTCCTTGCATCTTGTGGGAGATGTGTTGAAATTGATCAAGTGA 3750 44.72 MAFLFFFGSIEALYFSASLIKFLEGAWVAIALSLTFLVVMSVWHYGTVKKYEADVENKVPINWLLRIGPKIGIVRVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQILVFLCIKSVTVPHVRPEERFLVGRVGPKEHRIYRCIARYGYRDMHKDDLEFERDLSCSIAEFIRSEGTERNNFRHEDLDDDERMTVIGTSSTQLDGVQMCENEAYSSPIVGTSELPKSEKMRKRVRFVVPESPKMDIDTRGELEELMEAREAGMAFIMGHSYVKAKKGSGWMKKVVINYGYDLLRKNSRGPSYALSIPFASTLEFSTFFLLWLEWIWVGFALVFVLLFGGVSSASATPPAKIVRGVLSNVVSSLVKRLWSMKSSAKTAVSSRSMMKFESGYTVETVFDGSKLGIDPYSVEVSPSGELLILDAENSNIYKISMPLSRFLSVLAISKLGLLRWPKLVSGSAEGYSGHVDGHPREARMNHPKGFTLDARGNVYIADTMNMAIRKISDTGVTTIAGGRWNQGNGHIDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNSAIREIELNYDDCNTQYADSLNLGVVLLVAAGLFGYLLALLQRRVQAISHQMMKATPVAPYQRPPLKSVRPSLIPNEDEPEKLEEGFFGLLGRLFVNSGSSVADIFGGLLSGFRRKPLNNQIHQQFQPVNRHPNAWPLQESFMIPDEDEPPSIEAKTPTIKKTYPFMTQDLDRSHQFKPNRSYFNGWDSEFHQQQQQQQQIQHNHQQQHLQHHHQQQQHIQQQHHHHHQQHNYNRQYSAGPTTYYEKSCETSEIVFGAVQEQDGRREAMVIKAVDYGDPRYNHHNIRARYNYTGNDTLMHSQTAYEEALSVLSSLIVNRRRCDKSGDRFELMFEYVKMLDLEEPMRRMKVIHVAGTKGKEKTSKDIPMPHLFRFLALLAFKIFSDEQVDVAILEVGLGGTFDATNVVQEPLVCGIASLGYDHMEILAFTLFQPDEAMHVLRDKASQLDVQLTVVPSLDPELLHGRKLGLEGEHQYLNAGLAIALSSTWLHRAGHSKLSYMEQSRSLPEKFIEGLTSASFDGRAQIVADRCVDIESPEGLVFYLDGAHSPESMEVCARWFSAAIRHNQRGMLNHQSEDKSTSDNNEARKKSVQKALFVPNTSVFNKVGSHSLAEANGQVDLSWQFHVRRVWQNTIQRDKGSDSKAEVVGKSCENSTVFSSLPMAIKWLRDSVLQQNRSIRLQVLVTGSLHLVGDVLKLIK 1249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1558286 1570321 - CmoCh15G003370.1 Cmo15g00337 397845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo15g00337 1249 Gene3D - 910 1051 IPR036565 GO:0005524|GO:0009058
Cmo15g00337 1249 MobiDBLite consensus disorder prediction 740 756 - -
Cmo15g00337 1249 Gene3D - 1071 1249 IPR036615 GO:0009058|GO:0016881
Cmo15g00337 1249 Gene3D - 360 557 IPR011042 -
Cmo15g00337 1249 PANTHER - 755 845 - -
Cmo15g00337 1249 PANTHER - 324 764 - -
Cmo15g00337 1249 PANTHER POTASSIUM TRANSPORTER 755 845 - -
Cmo15g00337 1249 PANTHER POTASSIUM TRANSPORTER 324 764 - -
Cmo15g00337 1249 MobiDBLite consensus disorder prediction 740 782 - -
Cmo15g00337 1249 SUPERFAMILY MurD-like peptide ligases, peptide-binding domain 1071 1248 IPR036615 GO:0009058|GO:0016881
Cmo15g00337 1249 MobiDBLite consensus disorder prediction 757 782 - -
Cmo15g00337 1249 ProSitePatterns Folylpolyglutamate synthase signature 2. 942 957 IPR018109 GO:0004326|GO:0005524|GO:0009396
Cmo15g00337 1249 SUPERFAMILY NHL repeat 387 558 - -
Cmo15g00337 1249 Pfam K+ potassium transporter 2 150 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo15g00337 1249 SUPERFAMILY MurD-like peptide ligases, catalytic domain 873 1039 IPR036565 GO:0005524|GO:0009058
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo14g00646 Cmo15g00337 CCT
Cmo14g00646 Cmo15g00337 ECH
Cmo04g02849 Cmo15g00337 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00713 Cmo-Chr4:3539679 Cmo15g00337 Cmo-Chr15:1558286 2.97E-69 dispersed
Cmo15g00337 Cmo-Chr15:1558286 Cmo14g00647 Cmo-Chr14:3259642 1.63E-153 dispersed
Cmo04g02848 Cmo-Chr4:20334749 Cmo15g00337 Cmo-Chr15:1558286 0 transposed
Cmo14g00563 Cmo-Chr14:2856853 Cmo15g00337 Cmo-Chr15:1558286 1.83E-85 transposed
Cmo16g00075 Cmo-Chr16:350683 Cmo15g00337 Cmo-Chr15:1558286 5.21E-08 transposed
Cmo11g01702 Cmo-Chr11:12075480 Cmo15g00337 Cmo-Chr15:1558286 6.40E-159 wgd
Cmo14g00646 Cmo-Chr14:3254644 Cmo15g00337 Cmo-Chr15:1558286 9.07E-124 wgd
Cmo15g00337 Cmo-Chr15:1558286 Cmo04g02846 Cmo-Chr4:20324007 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo15g00337 - - csv:101209861 830.476